BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004266
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525617.1| PREDICTED: F-box protein SKIP14-like [Glycin...    75   7e-12
ref|XP_003555127.1| PREDICTED: F-box protein SKIP14-like [Glycin...    72   5e-11
emb|CBI40086.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...    68   9e-10
ref|XP_002298587.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>ref|XP_003525617.1| PREDICTED: F-box protein SKIP14-like [Glycine max]
          Length = 517

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
 Frame = +1

Query: 1   GAQPHLSIYNDRAIDIEACPKCKLFRQVYDCPADSCQGKNRA--MXXXXXXXXXXXXXXX 174
           G   H+   +DRAIDIE CP+CK  R VYDCPA+SCQ K++A  +               
Sbjct: 382 GEYSHIICEDDRAIDIEVCPRCKKLRPVYDCPAESCQQKHQASQLCRGCTICIARCIHCG 441

Query: 175 XXXKYSDVMENFTLDLVCMPCWKHFDGDNHGRMETHLD----HILYC 303
              K  D  E F LDL+C+ CW     D H  + T++     H+  C
Sbjct: 442 RCIKDFDYEETFCLDLLCLNCWNQSAPDLHDDLLTYIGSESAHLAVC 488


>ref|XP_003555127.1| PREDICTED: F-box protein SKIP14-like [Glycine max]
          Length = 587

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
 Frame = +1

Query: 1   GAQPHLSIYNDRAIDIEACPKCKLFRQVYDCPADSCQGKNRA--MXXXXXXXXXXXXXXX 174
           G   H++  +DRAIDIE CP+C+  R VYDCPA+SCQ K++A  +               
Sbjct: 377 GEYSHITCEDDRAIDIEVCPRCEKLRPVYDCPAESCQPKHQASQLCRGCTICIARCLHCG 436

Query: 175 XXXKYSDVMENFTLDLVCMPCWKHFDGDNHGRME---THLDHILYC 303
              K  D  E F LDL+C+ CW       HG +    +   H++ C
Sbjct: 437 RCIKDFDYEETFCLDLLCLNCWNQSAPGLHGLLTYIGSESAHLVVC 482


>emb|CBI40086.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   GAQPHLSIYNDRAIDIEACPKCKLFRQVYDCPADSCQGKNRA--MXXXXXXXXXXXXXXX 174
           G Q +LS  +DRAIDIE CP+C+  R VYDCP++SCQGK+++  +               
Sbjct: 364 GEQLYLSCDDDRAIDIEVCPRCQKVRLVYDCPSESCQGKHQSAQLCRACTLCIARCFHCG 423

Query: 175 XXXKYSDVMENFTLDLVCMPCWK 243
                 D  E F LDL+C+ C+K
Sbjct: 424 RCINDCDYEETFCLDLLCLDCFK 446


>ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 480

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   GAQPHLSIYNDRAIDIEACPKCKLFRQVYDCPADSCQGKNRA--MXXXXXXXXXXXXXXX 174
           G Q +LS  +DRAIDIE CP+C+  R VYDCP++SCQGK+++  +               
Sbjct: 364 GEQLYLSCDDDRAIDIEVCPRCQKVRLVYDCPSESCQGKHQSAQLCRACTLCIARCFHCG 423

Query: 175 XXXKYSDVMENFTLDLVCMPCWK 243
                 D  E F LDL+C+ C+K
Sbjct: 424 RCINDCDYEETFCLDLLCLDCFK 446


>ref|XP_002298587.1| predicted protein [Populus trichocarpa] gi|222845845|gb|EEE83392.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +1

Query: 7   QPHLSIYNDRAIDIEACPKCKLFRQVYDCPADSCQGKNRA--MXXXXXXXXXXXXXXXXX 180
           Q + S  ++R IDIE CPKC+  + VYDCP++SCQGK++A  +                 
Sbjct: 307 QLYPSCDDERTIDIEMCPKCQQLKLVYDCPSESCQGKDQANQLCRACTVCIARCIHCGCC 366

Query: 181 XKYSDVMENFTLDLVCMPCWKH 246
            K  D  E F LD +C+ C KH
Sbjct: 367 IKGCDYEETFCLDFLCLDCLKH 388