BLASTX nr result

ID: Bupleurum21_contig00004263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004263
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533345.1| Late embryogenesis abundant protein Lea14-A,...   416   e-114
gb|ABS50432.1| chilling-responsive protein [Nicotiana tabacum]        406   e-111
emb|CBI24768.3| unnamed protein product [Vitis vinifera]              405   e-111
ref|XP_002280489.1| PREDICTED: uncharacterized protein LOC100266...   405   e-110
emb|CAN78553.1| hypothetical protein VITISV_042205 [Vitis vinifera]   405   e-110

>ref|XP_002533345.1| Late embryogenesis abundant protein Lea14-A, putative [Ricinus
           communis] gi|223526810|gb|EEF29030.1| Late embryogenesis
           abundant protein Lea14-A, putative [Ricinus communis]
          Length = 313

 Score =  416 bits (1070), Expect = e-114
 Identities = 207/307 (67%), Positives = 236/307 (76%), Gaps = 3/307 (0%)
 Frame = +1

Query: 40  MSSSDKPEIAERAVKDKEDKDE---GFFGTVKGFIQDIGEKIEETVGFGKPTADVAAIHI 210
           M+SSDKPE+ +R VKDK+DKDE   GF   VK FI DIGEKIEE +GFGKPTADV  +HI
Sbjct: 1   MASSDKPEVVDRDVKDKDDKDEEKGGFIDKVKDFIHDIGEKIEEAIGFGKPTADVTGVHI 60

Query: 211 PKINLKQADIIVDVLVKNPNPVPIPLVDINYLVESDGRKLLSGLIPDAGTIHAHGSETIK 390
           P INL++ADI+VDVL+KNPNPVPIPLVDINYL+ESDGRKL+SGLIPDAGTI AHG ET+K
Sbjct: 61  PSINLEKADIVVDVLIKNPNPVPIPLVDINYLIESDGRKLISGLIPDAGTIRAHGEETVK 120

Query: 391 IPVCLIYDDIKNTYEDIHPGKIIPYKVKVDLIVDVPVFGRLTLPLDKTGEIPVPYKPDID 570
           IPV LIYDDIKNTY+DI PG IIPY++KVDLI+DVPVFGRLTLPL+KTGEIP+PYKPDID
Sbjct: 121 IPVTLIYDDIKNTYDDIQPGSIIPYRIKVDLIIDVPVFGRLTLPLEKTGEIPIPYKPDID 180

Query: 571 VDKIKFESFSMEKTVAILHVKLDNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 750
           ++KI FE FS E+TVA+LHVKL+N                                    
Sbjct: 181 LEKIHFERFSFEETVAVLHVKLEN---MNDFDLGLNGLDYEVWLSDVSIGGAELAESTKI 237

Query: 751 XXXXXXXXXXPISFRPKDFGSALWDMIRGRGIGYTMKGNIEVNTPFGPMKLPISREGGTT 930
                     PI+FRPKDFGSALWDMIRG+G GYTMKG+I V+TPFG MKLPIS+EGGTT
Sbjct: 238 EKKGISYIDIPITFRPKDFGSALWDMIRGKGTGYTMKGHINVDTPFGAMKLPISKEGGTT 297

Query: 931 RLKKNKE 951
           RLKKNKE
Sbjct: 298 RLKKNKE 304


>gb|ABS50432.1| chilling-responsive protein [Nicotiana tabacum]
          Length = 320

 Score =  406 bits (1044), Expect = e-111
 Identities = 210/313 (67%), Positives = 234/313 (74%), Gaps = 9/313 (2%)
 Frame = +1

Query: 40  MSSSDKPEIAERAVKDKED------KDE---GFFGTVKGFIQDIGEKIEETVGFGKPTAD 192
           MSSS+ PEI ER   DKE       KDE   GF   VK FIQDIGEKIEET+GFGKPTAD
Sbjct: 1   MSSSENPEIVERVFGDKEKEEKEDKKDEQKGGFIEKVKDFIQDIGEKIEETIGFGKPTAD 60

Query: 193 VAAIHIPKINLKQADIIVDVLVKNPNPVPIPLVDINYLVESDGRKLLSGLIPDAGTIHAH 372
           V  IHIP INLK+A+I+VDVLVKNPNPVPIPL+DINYL++SDGRKL+SGLIPDAGTIHAH
Sbjct: 61  VTEIHIPHINLKKAEIVVDVLVKNPNPVPIPLIDINYLIDSDGRKLVSGLIPDAGTIHAH 120

Query: 373 GSETIKIPVCLIYDDIKNTYEDIHPGKIIPYKVKVDLIVDVPVFGRLTLPLDKTGEIPVP 552
           GSET+KIPV L+YDDIKNTY DI PG IIPY++KVDLIVDVPVFGRLTLPL+KTGEIP+P
Sbjct: 121 GSETVKIPVNLVYDDIKNTYHDIQPGSIIPYRIKVDLIVDVPVFGRLTLPLEKTGEIPIP 180

Query: 553 YKPDIDVDKIKFESFSMEKTVAILHVKLDNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 732
           YKPDID++KI FE FS E+TVA+L +KL+NK                             
Sbjct: 181 YKPDIDLEKIHFERFSFEETVAVLKLKLENK---NNFDLALNSLDYDLWLSDVNVGGAEL 237

Query: 733 XXXXXXXXXXXXXXXXPISFRPKDFGSALWDMIRGRGIGYTMKGNIEVNTPFGPMKLPIS 912
                           PI+FRPKDFGSALWDMIRGRG GYTMKGNI V+TPFG MKLPIS
Sbjct: 238 EKSAKLEKNGISYIDIPITFRPKDFGSALWDMIRGRGTGYTMKGNINVDTPFGAMKLPIS 297

Query: 913 REGGTTRLKKNKE 951
           + GGTTRLKKNKE
Sbjct: 298 KGGGTTRLKKNKE 310


>emb|CBI24768.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  405 bits (1041), Expect = e-111
 Identities = 208/320 (65%), Positives = 245/320 (76%), Gaps = 4/320 (1%)
 Frame = +1

Query: 1    NQFSDLHSLYQ*TMSSSDKPE-IAERAVKDKEDKDE---GFFGTVKGFIQDIGEKIEETV 168
            N+ SDL  L    MSSSDKPE + ER  K+K+DK+E   GF   VK FI DIGEKIEE +
Sbjct: 76   NKPSDLCCL---GMSSSDKPEEVVERDAKEKDDKNEEKGGFIEKVKDFIHDIGEKIEEAI 132

Query: 169  GFGKPTADVAAIHIPKINLKQADIIVDVLVKNPNPVPIPLVDINYLVESDGRKLLSGLIP 348
            GFGKPTADV  IHIPKINL++ADI++DVLV NPNP+PIPLVDI+YL+ESDGRKL+SGLIP
Sbjct: 133  GFGKPTADVTGIHIPKINLERADIVIDVLVTNPNPIPIPLVDIDYLIESDGRKLVSGLIP 192

Query: 349  DAGTIHAHGSETIKIPVCLIYDDIKNTYEDIHPGKIIPYKVKVDLIVDVPVFGRLTLPLD 528
            DAGTI+AHGSET+KIPV LIYDDIKNTY DI PG IIPYK+KV+LIVDVPVFGRLTLPL+
Sbjct: 193  DAGTINAHGSETVKIPVSLIYDDIKNTYSDIKPGSIIPYKIKVNLIVDVPVFGRLTLPLE 252

Query: 529  KTGEIPVPYKPDIDVDKIKFESFSMEKTVAILHVKLDNKXXXXXXXXXXXXXXXXXXXXX 708
            KTGEIP+PYKPDID++K++F+SFS E+TVA+LH+KLDNK                     
Sbjct: 253  KTGEIPIPYKPDIDLEKVQFQSFSFEETVAVLHLKLDNK---NDFDLGLNGLDYEVWLAD 309

Query: 709  XXXXXXXXXXXXXXXXXXXXXXXXPISFRPKDFGSALWDMIRGRGIGYTMKGNIEVNTPF 888
                                    PI+FRP++FGSALWDMIRG+G GYTMKGNI+V+TPF
Sbjct: 310  VSIGGAELSKSAKIEKNGISCIELPITFRPREFGSALWDMIRGKGTGYTMKGNIDVDTPF 369

Query: 889  GPMKLPISREGGTTRLKKNK 948
            G MKLPIS+EGG+TRLKK+K
Sbjct: 370  GAMKLPISKEGGSTRLKKDK 389


>ref|XP_002280489.1| PREDICTED: uncharacterized protein LOC100266227 [Vitis vinifera]
          Length = 315

 Score =  405 bits (1040), Expect = e-110
 Identities = 203/307 (66%), Positives = 239/307 (77%), Gaps = 4/307 (1%)
 Frame = +1

Query: 40  MSSSDKPE-IAERAVKDKEDKDE---GFFGTVKGFIQDIGEKIEETVGFGKPTADVAAIH 207
           MSSSDKPE + ER  K+K+DK+E   GF   VK FI DIGEKIEE +GFGKPTADV  IH
Sbjct: 1   MSSSDKPEEVVERDAKEKDDKNEEKGGFIEKVKDFIHDIGEKIEEAIGFGKPTADVTGIH 60

Query: 208 IPKINLKQADIIVDVLVKNPNPVPIPLVDINYLVESDGRKLLSGLIPDAGTIHAHGSETI 387
           IPKINL++ADI++DVLV NPNP+PIPLVDI+YL+ESDGRKL+SGLIPDAGTI+AHGSET+
Sbjct: 61  IPKINLERADIVIDVLVTNPNPIPIPLVDIDYLIESDGRKLVSGLIPDAGTINAHGSETV 120

Query: 388 KIPVCLIYDDIKNTYEDIHPGKIIPYKVKVDLIVDVPVFGRLTLPLDKTGEIPVPYKPDI 567
           KIPV LIYDDIKNTY DI PG IIPYK+KV+LIVDVPVFGRLTLPL+KTGEIP+PYKPDI
Sbjct: 121 KIPVSLIYDDIKNTYSDIKPGSIIPYKIKVNLIVDVPVFGRLTLPLEKTGEIPIPYKPDI 180

Query: 568 DVDKIKFESFSMEKTVAILHVKLDNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 747
           D++K++F+SFS E+TVA+LH+KLDNK                                  
Sbjct: 181 DLEKVQFQSFSFEETVAVLHLKLDNK---NDFDLGLNGLDYEVWLADVSIGGAELSKSAK 237

Query: 748 XXXXXXXXXXXPISFRPKDFGSALWDMIRGRGIGYTMKGNIEVNTPFGPMKLPISREGGT 927
                      PI+FRP++FGSALWDMIRG+G GYTMKGNI+V+TPFG MKLPIS+EGG+
Sbjct: 238 IEKNGISCIELPITFRPREFGSALWDMIRGKGTGYTMKGNIDVDTPFGAMKLPISKEGGS 297

Query: 928 TRLKKNK 948
           TRLKK+K
Sbjct: 298 TRLKKDK 304


>emb|CAN78553.1| hypothetical protein VITISV_042205 [Vitis vinifera]
          Length = 317

 Score =  405 bits (1040), Expect = e-110
 Identities = 203/307 (66%), Positives = 239/307 (77%), Gaps = 4/307 (1%)
 Frame = +1

Query: 40  MSSSDKPE-IAERAVKDKEDKDE---GFFGTVKGFIQDIGEKIEETVGFGKPTADVAAIH 207
           MSSSDKPE + ER  K+K+DK+E   GF   VK FI DIGEKIEE +GFGKPTADV  IH
Sbjct: 1   MSSSDKPEEVVERDAKEKDDKNEEKGGFIEKVKDFIHDIGEKIEEAIGFGKPTADVTGIH 60

Query: 208 IPKINLKQADIIVDVLVKNPNPVPIPLVDINYLVESDGRKLLSGLIPDAGTIHAHGSETI 387
           IPKINL++ADI++DVLV NPNP+PIPLVDI+YL+ESDGRKL+SGLIPDAGTI+AHGSET+
Sbjct: 61  IPKINLERADIVIDVLVTNPNPIPIPLVDIDYLIESDGRKLVSGLIPDAGTINAHGSETV 120

Query: 388 KIPVCLIYDDIKNTYEDIHPGKIIPYKVKVDLIVDVPVFGRLTLPLDKTGEIPVPYKPDI 567
           KIPV LIYDDIKNTY DI PG IIPYK+KV+LIVDVPVFGRLTLPL+KTGEIP+PYKPDI
Sbjct: 121 KIPVSLIYDDIKNTYSDIKPGSIIPYKIKVNLIVDVPVFGRLTLPLEKTGEIPIPYKPDI 180

Query: 568 DVDKIKFESFSMEKTVAILHVKLDNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 747
           D++K++F+SFS E+TVA+LH+KLDNK                                  
Sbjct: 181 DLEKVQFQSFSFEETVAVLHLKLDNK---NDFDLGLNGLDYEVWLADVSIGGAELSKSAK 237

Query: 748 XXXXXXXXXXXPISFRPKDFGSALWDMIRGRGIGYTMKGNIEVNTPFGPMKLPISREGGT 927
                      PI+FRP++FGSALWDMIRG+G GYTMKGNI+V+TPFG MKLPIS+EGG+
Sbjct: 238 IEKNGISCIELPITFRPREFGSALWDMIRGKGTGYTMKGNIDVDTPFGAMKLPISKEGGS 297

Query: 928 TRLKKNK 948
           TRLKK+K
Sbjct: 298 TRLKKDK 304


Top