BLASTX nr result

ID: Bupleurum21_contig00004259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004259
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68895.1| hypothetical protein VITISV_026039 [Vitis vinifera]   275   7e-72
ref|XP_002283765.2| PREDICTED: uncharacterized protein LOC100252...   275   1e-71
ref|XP_002330161.1| predicted protein [Populus trichocarpa] gi|2...   238   2e-60
ref|XP_004135597.1| PREDICTED: uncharacterized protein LOC101222...   223   4e-56
ref|XP_003554644.1| PREDICTED: uncharacterized protein LOC100817...   213   4e-53

>emb|CAN68895.1| hypothetical protein VITISV_026039 [Vitis vinifera]
          Length = 459

 Score =  275 bits (704), Expect = 7e-72
 Identities = 132/225 (58%), Positives = 169/225 (75%)
 Frame = +3

Query: 3   AKRGIGRLLLDADNVPMVVPFVHTGMQDIMPIGAKFPRIGKTVTVLVGDPIEFGDLIGME 182
           AKRG+GRL+LDADN P+VVPFVHTGMQ++MPIGA FPRIG+ VTVL+GDPI F DL+  +
Sbjct: 230 AKRGVGRLVLDADNTPIVVPFVHTGMQEVMPIGANFPRIGQAVTVLIGDPIHFDDLLNEQ 289

Query: 183 GNSEMSRGKLYDAVSARVGERIRKMKAQVDKLALEQALQSQNSPWRCNDRAAGILRQVDW 362
               MSRGKLYDAVS+RV  R++++K QVDKLALE ++Q QN   +  +RAAGIL QVDW
Sbjct: 290 QTQHMSRGKLYDAVSSRVSHRLQELKVQVDKLALEHSIQLQNHDMQTTERAAGILHQVDW 349

Query: 363 EALGMEHYIGCGDEQQSPKHNVGTEHKVEQINVKENSSQNRYFRMGFTYEGGMVSRIRGY 542
           E+ GM  YI   +   S +  + +  K+   N +E++   RYF MGF+YEGG+VSRIRGY
Sbjct: 350 ESFGMGSYI-TSENDSSSRLEIQSPMKLNVTNTQEHAPSERYFGMGFSYEGGIVSRIRGY 408

Query: 543 MDPTELMGFAARGIFANPKVNESCVNIQTVGPLKAWKNFMEGHLV 677
           MDPTELMGFAARG+F N +  E   +IQ + PLKAWK F+E +++
Sbjct: 409 MDPTELMGFAARGLFLNRRAEEKLASIQEIRPLKAWKQFLEANIL 453


>ref|XP_002283765.2| PREDICTED: uncharacterized protein LOC100252917 [Vitis vinifera]
           gi|296089698|emb|CBI39517.3| unnamed protein product
           [Vitis vinifera]
          Length = 459

 Score =  275 bits (702), Expect = 1e-71
 Identities = 133/225 (59%), Positives = 169/225 (75%)
 Frame = +3

Query: 3   AKRGIGRLLLDADNVPMVVPFVHTGMQDIMPIGAKFPRIGKTVTVLVGDPIEFGDLIGME 182
           AKRG+GRL+LDADN P+VVPFVHTGMQ++MPIGA FPRIG+ VTVL+GDPI F DL+  E
Sbjct: 230 AKRGVGRLVLDADNTPIVVPFVHTGMQEVMPIGANFPRIGQAVTVLIGDPIHFDDLLNEE 289

Query: 183 GNSEMSRGKLYDAVSARVGERIRKMKAQVDKLALEQALQSQNSPWRCNDRAAGILRQVDW 362
               MSRGKLYDAVS+RV  R++++K QVDKLALE ++Q QN   +  + AAGIL QVDW
Sbjct: 290 QTQHMSRGKLYDAVSSRVSRRLQELKVQVDKLALEHSIQLQNHDMQTTEWAAGILHQVDW 349

Query: 363 EALGMEHYIGCGDEQQSPKHNVGTEHKVEQINVKENSSQNRYFRMGFTYEGGMVSRIRGY 542
           E+ GM  YI   D+  S +  + +  K+   N +E++   RYF MGF+YEGG+VSRIRGY
Sbjct: 350 ESFGMGSYITSEDDSSS-RLEIQSPMKLNVTNTQEHAPSERYFGMGFSYEGGIVSRIRGY 408

Query: 543 MDPTELMGFAARGIFANPKVNESCVNIQTVGPLKAWKNFMEGHLV 677
           MDPTELMGFAARG+F N +  E   +IQ + PLKAWK F+E +++
Sbjct: 409 MDPTELMGFAARGLFLNRRAEEKLASIQEIRPLKAWKQFLEANIL 453


>ref|XP_002330161.1| predicted protein [Populus trichocarpa] gi|222871617|gb|EEF08748.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  238 bits (606), Expect = 2e-60
 Identities = 116/225 (51%), Positives = 164/225 (72%)
 Frame = +3

Query: 3   AKRGIGRLLLDADNVPMVVPFVHTGMQDIMPIGAKFPRIGKTVTVLVGDPIEFGDLIGME 182
           +KRG+GRL+LDAD VP+V+PFVHTGMQ+IMPIGA  PRIGK VTVL+GDPI F D++  E
Sbjct: 242 SKRGVGRLILDADTVPLVIPFVHTGMQEIMPIGATLPRIGKRVTVLLGDPIHFDDILDAE 301

Query: 183 GNSEMSRGKLYDAVSARVGERIRKMKAQVDKLALEQALQSQNSPWRCNDRAAGILRQVDW 362
           G   +SRGK+YDAVS+R+G+R++++K QV+KLALEQ+++ Q +     +RAA +L+QVDW
Sbjct: 302 GVENISRGKMYDAVSSRIGQRLQQLKVQVEKLALEQSVEFQQAAAGITERAADMLQQVDW 361

Query: 363 EALGMEHYIGCGDEQQSPKHNVGTEHKVEQINVKENSSQNRYFRMGFTYEGGMVSRIRGY 542
            +       G G    + + ++  E +  Q    E  S  RYFR+GF+Y+  ++SR+RGY
Sbjct: 362 GS------FGAGSHVSTEERDLPCEPRPSQ----ELLSSGRYFRIGFSYDSIIISRMRGY 411

Query: 543 MDPTELMGFAARGIFANPKVNESCVNIQTVGPLKAWKNFMEGHLV 677
           MD TEL+GFAARG+F N +  E   +I+ VGP++AWK F+E +L+
Sbjct: 412 MDSTELLGFAARGLFMNFRAREHTASIRDVGPVRAWKQFLEANLL 456


>ref|XP_004135597.1| PREDICTED: uncharacterized protein LOC101222774 [Cucumis sativus]
           gi|449517345|ref|XP_004165706.1| PREDICTED:
           uncharacterized LOC101222774 [Cucumis sativus]
          Length = 479

 Score =  223 bits (568), Expect = 4e-56
 Identities = 114/225 (50%), Positives = 152/225 (67%)
 Frame = +3

Query: 3   AKRGIGRLLLDADNVPMVVPFVHTGMQDIMPIGAKFPRIGKTVTVLVGDPIEFGDLIGME 182
           +KRGIGRL+LDAD VP V+PFVHTGMQ+IMPIGAK PRIGKTVT+L+GDPIEF DL   E
Sbjct: 236 SKRGIGRLVLDADTVPTVIPFVHTGMQEIMPIGAKIPRIGKTVTILIGDPIEFEDLFNSE 295

Query: 183 GNSEMSRGKLYDAVSARVGERIRKMKAQVDKLALEQALQSQNSPWRCNDRAAGILRQVDW 362
              + SRGKLYDAV++RVG R+ +MK QV+KLA ++AL  QN      +RAA +L+Q+DW
Sbjct: 296 SEQKFSRGKLYDAVTSRVGNRLLEMKLQVEKLAHDRALDMQNHSMSGTERAAIMLQQIDW 355

Query: 363 EALGMEHYIGCGDEQQSPKHNVGTEHKVEQINVKENSSQNRYFRMGFTYEGGMVSRIRGY 542
           E+ G+  +     +  SP +          +  ++    +  FRM  + EGG +SR+RGY
Sbjct: 356 ESFGIGSFTSI--DYNSPTNQETQTQSDLDVPSEQQPISDWNFRMHLSREGGFISRMRGY 413

Query: 543 MDPTELMGFAARGIFANPKVNESCVNIQTVGPLKAWKNFMEGHLV 677
           +DPTE M FAARG+F N K   +    +   PLKAWK F+E +++
Sbjct: 414 IDPTEFMSFAARGLFRNHKTLGNSELDEANRPLKAWKRFVEANVM 458


>ref|XP_003554644.1| PREDICTED: uncharacterized protein LOC100817507 [Glycine max]
          Length = 467

 Score =  213 bits (542), Expect = 4e-53
 Identities = 109/228 (47%), Positives = 157/228 (68%), Gaps = 3/228 (1%)
 Frame = +3

Query: 3   AKRGIGRLLLDADNVPMVVPFVHTGMQDIMPIGAKFPRIGKTVTVLVGDPIEFGDLI--G 176
           +KRG+GRL+LD D++P+VVPFVHTGMQ+IMP+GA FPRIGK VTVL+GDPI F D++   
Sbjct: 240 SKRGVGRLVLDGDSMPLVVPFVHTGMQEIMPVGANFPRIGKMVTVLIGDPINFDDILEFD 299

Query: 177 MEGNSEMSRGKLYDAVSARVGERIRKMKAQVDKLALEQALQSQNSPWRCNDRAAGILRQV 356
           ME  S + R +L+DAV++R+G+R+ +MK QVD +A+EQ +Q Q++     DR + IL+QV
Sbjct: 300 MEKGSNVPRRRLFDAVASRIGDRLHEMKVQVDTIAIEQEMQLQDNSSHSTDRTSEILQQV 359

Query: 357 DWEALGMEHYIGCGDEQQSPKHNVGTEH-KVEQINVKENSSQNRYFRMGFTYEGGMVSRI 533
           DWE  GM+ ++   D+ +  +  V   +  V Q + K +S Q+  +R GF+Y      R+
Sbjct: 360 DWELFGMDSFMSVEDDSKQRQETVLLRNVSVSQHHQKSHSDQS--WRAGFSY------RM 411

Query: 534 RGYMDPTELMGFAARGIFANPKVNESCVNIQTVGPLKAWKNFMEGHLV 677
           R Y+D  EL+ FAARGIF N +   S    + +GPLKAWK F+E +L+
Sbjct: 412 RDYIDQMELVSFAARGIFMNNETKNSAGRSREMGPLKAWKQFLEANLL 459


Top