BLASTX nr result

ID: Bupleurum21_contig00004255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004255
         (1581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276148.2| PREDICTED: AT-rich interactive domain-contai...   331   4e-88
emb|CAN80959.1| hypothetical protein VITISV_037562 [Vitis vinifera]   331   4e-88
emb|CBI40441.3| unnamed protein product [Vitis vinifera]              310   9e-82
ref|XP_002320807.1| predicted protein [Populus trichocarpa] gi|2...   305   2e-80
ref|XP_003529936.1| PREDICTED: uncharacterized protein LOC100779...   285   3e-74

>ref|XP_002276148.2| PREDICTED: AT-rich interactive domain-containing protein 1-like
            [Vitis vinifera]
          Length = 628

 Score =  331 bits (848), Expect = 4e-88
 Identities = 186/396 (46%), Positives = 242/396 (61%), Gaps = 15/396 (3%)
 Frame = +2

Query: 116  NDKQIGDAETRDLAFDNQGNEDVCNRKRKRDCNLELLNWVTKVARDPCNPVIGCLPDASK 295
            N K + D E   +   N+ NE+V  RKRKR+  L +LNWVT +A++PC+P IG LP+ SK
Sbjct: 241  NRKCVDDDEDVMILDLNEVNEEVFTRKRKREYMLGMLNWVTTIAKNPCDPSIGKLPERSK 300

Query: 296  WKFFGNEQLWKQVLVVRQAMMVKRYADSSAVRSIWQK-QKMHPAMYEEEHSGSSRHLHRI 472
            WK  G  +LWKQVL+VR+A+ ++R  D SA +SIWQK QKMHP+MYE+ H+GS R     
Sbjct: 301  WKLTGPGELWKQVLLVREALFLQRDVDLSAEQSIWQKKQKMHPSMYED-HAGSER----- 354

Query: 473  ASSKIPRAVLSSKRLKAGFCSESTSSG-QSDL--------EDSFGRQSSRLTD-----SL 610
               +  + +LS KR ++  CSES+SS  QSDL        ED   +Q   + D     S+
Sbjct: 355  --LRYSQRLLSGKRSRSRACSESSSSATQSDLDKSPSPCMEDHHDKQLLGICDPSIGHSV 412

Query: 611  SGLWLKNFSRKRIPLGVYFQAEVPEWTGKSDESDSKWLGTRVWPLEKTESCNSLVERDRT 790
            +GL   +  RKR P+G  FQA +PEWTG   E DSKWLGTRVWPL+K E    L+ERD  
Sbjct: 413  AGLCGDSHVRKR-PVGPAFQATIPEWTGVVSEIDSKWLGTRVWPLDKIEH-KFLIERDPI 470

Query: 791  GFGRHKQCGCEFEGSFECVKFHVSQKRNRLKMELGMAFYRWDIDMTGEEAAFFWNKADET 970
            G GR   CGC+F GS  CV+FHV++KR R+K+ELG AF  W  D  GE     W++ ++ 
Sbjct: 471  GKGRQDSCGCQFPGSIACVQFHVAEKRIRIKLELGSAFQHWQFDKMGEVVGLSWSEEEKK 530

Query: 971  KFEAIIKSNPPSQDKYFWEEICKNFLHKKREQLVSYYFNVFLLRRRGLQNRSTPXXXXXX 1150
            +F+ I++ NPPS    FW+EI K+F  K RE LVSYYFNVFLL+RR  QNR TP      
Sbjct: 531  RFKEIVRLNPPSMGVRFWDEIFKSFSTKSREDLVSYYFNVFLLQRRADQNRLTPNNIDSD 590

Query: 1151 XXXXXXXXXTNCNGHIAAKAPKPIYCSPKKTHLNFR 1258
                     +N  GH A   P  I  +    H+NFR
Sbjct: 591  DDESEFGPLSNGFGHEAINLPSSILYAQNNPHMNFR 626


>emb|CAN80959.1| hypothetical protein VITISV_037562 [Vitis vinifera]
          Length = 724

 Score =  331 bits (848), Expect = 4e-88
 Identities = 186/396 (46%), Positives = 242/396 (61%), Gaps = 15/396 (3%)
 Frame = +2

Query: 116  NDKQIGDAETRDLAFDNQGNEDVCNRKRKRDCNLELLNWVTKVARDPCNPVIGCLPDASK 295
            N K + D E   +   N+ NE+V  RKRKR+  L +LNWVT +A++PC+P IG LP+ SK
Sbjct: 241  NRKCVDDDEDVMILDLNEVNEEVFTRKRKREYMLGMLNWVTTIAKNPCDPSIGKLPERSK 300

Query: 296  WKFFGNEQLWKQVLVVRQAMMVKRYADSSAVRSIWQK-QKMHPAMYEEEHSGSSRHLHRI 472
            WK  G  +LWKQVL+VR+A+ ++R  D SA +SIWQK QKMHP+MYE+ H+GS R     
Sbjct: 301  WKLTGPGELWKQVLLVREALFLQRDVDLSAEQSIWQKKQKMHPSMYED-HAGSER----- 354

Query: 473  ASSKIPRAVLSSKRLKAGFCSESTSSG-QSDL--------EDSFGRQSSRLTD-----SL 610
               +  + +LS KR ++  CSES+SS  QSDL        ED   +Q   + D     S+
Sbjct: 355  --LRYSQRLLSGKRSRSRACSESSSSATQSDLDKSPSPCMEDHHDKQLLGICDPSIGHSV 412

Query: 611  SGLWLKNFSRKRIPLGVYFQAEVPEWTGKSDESDSKWLGTRVWPLEKTESCNSLVERDRT 790
            +GL   +  RKR P+G  FQA +PEWTG   E DSKWLGTRVWPL+K E    L+ERD  
Sbjct: 413  AGLCGDSHVRKR-PVGPAFQATIPEWTGVVSEIDSKWLGTRVWPLDKIEH-KFLIERDPI 470

Query: 791  GFGRHKQCGCEFEGSFECVKFHVSQKRNRLKMELGMAFYRWDIDMTGEEAAFFWNKADET 970
            G GR   CGC+F GS  CV+FHV++KR R+K+ELG AF  W  D  GE     W++ ++ 
Sbjct: 471  GKGRQDSCGCQFPGSIACVQFHVAEKRIRIKLELGSAFQHWQFDKMGEVVGLSWSEEEKK 530

Query: 971  KFEAIIKSNPPSQDKYFWEEICKNFLHKKREQLVSYYFNVFLLRRRGLQNRSTPXXXXXX 1150
            +F+ I++ NPPS    FW+EI K+F  K RE LVSYYFNVFLL+RR  QNR TP      
Sbjct: 531  RFKEIVRLNPPSMGVRFWDEIFKSFSTKSREDLVSYYFNVFLLQRRADQNRLTPNNIDSD 590

Query: 1151 XXXXXXXXXTNCNGHIAAKAPKPIYCSPKKTHLNFR 1258
                     +N  GH A   P  I  +    H+NFR
Sbjct: 591  DDESEFGPLSNGFGHEAINLPSSILYAQNNPHMNFR 626


>emb|CBI40441.3| unnamed protein product [Vitis vinifera]
          Length = 594

 Score =  310 bits (793), Expect = 9e-82
 Identities = 174/382 (45%), Positives = 224/382 (58%), Gaps = 1/382 (0%)
 Frame = +2

Query: 116  NDKQIGDAETRDLAFDNQGNEDVCNRKRKRDCNLELLNWVTKVARDPCNPVIGCLPDASK 295
            N K + D E   +   N+ NE+V  RKRKR+  L +LNWVT +A++PC+P IG LP+ SK
Sbjct: 248  NRKCVDDDEDVMILDLNEVNEEVFTRKRKREYMLGMLNWVTTIAKNPCDPSIGKLPERSK 307

Query: 296  WKFFGNEQLWKQVLVVRQAMMVKRYADSSAVRSIWQK-QKMHPAMYEEEHSGSSRHLHRI 472
            WK  G  +LWKQVL+VR+A+ ++R  D SA +SIWQK QKMHP+MYE+ H+GS R  +  
Sbjct: 308  WKLTGPGELWKQVLLVREALFLQRDVDLSAEQSIWQKKQKMHPSMYED-HAGSERLRY-- 364

Query: 473  ASSKIPRAVLSSKRLKAGFCSESTSSGQSDLEDSFGRQSSRLTDSLSGLWLKNFSRKRIP 652
                       S+RL +G  S S +SG                     L   +  RKR P
Sbjct: 365  -----------SQRLLSGKRSRSRASG---------------------LCGDSHVRKR-P 391

Query: 653  LGVYFQAEVPEWTGKSDESDSKWLGTRVWPLEKTESCNSLVERDRTGFGRHKQCGCEFEG 832
            +G  FQA +PEWTG   E DSKWLGTRVWPL+K E    L+ERD  G GR   CGC+F G
Sbjct: 392  VGPAFQATIPEWTGVVSEIDSKWLGTRVWPLDKIEH-KFLIERDPIGKGRQDSCGCQFPG 450

Query: 833  SFECVKFHVSQKRNRLKMELGMAFYRWDIDMTGEEAAFFWNKADETKFEAIIKSNPPSQD 1012
            S  CV+FHV++KR R+K+ELG AF  W  D  GE     W++ ++ +F+ I++ NPPS  
Sbjct: 451  SIACVQFHVAEKRIRIKLELGSAFQHWQFDKMGEVVGLSWSEEEKKRFKEIVRLNPPSMG 510

Query: 1013 KYFWEEICKNFLHKKREQLVSYYFNVFLLRRRGLQNRSTPXXXXXXXXXXXXXXXTNCNG 1192
              FW+EI K+F  K RE LVSYYFNVFLL+RR  QNR TP               +N  G
Sbjct: 511  VRFWDEIFKSFSTKSREDLVSYYFNVFLLQRRADQNRLTPNNIDSDDDESEFGPLSNGFG 570

Query: 1193 HIAAKAPKPIYCSPKKTHLNFR 1258
            H A   P  I  +    H+NFR
Sbjct: 571  HEAINLPSSILYAQNNPHMNFR 592


>ref|XP_002320807.1| predicted protein [Populus trichocarpa] gi|222861580|gb|EEE99122.1|
            predicted protein [Populus trichocarpa]
          Length = 425

 Score =  305 bits (782), Expect = 2e-80
 Identities = 175/384 (45%), Positives = 239/384 (62%), Gaps = 7/384 (1%)
 Frame = +2

Query: 2    NEDRRFVLVNAN---EDRRFVLVNANEDRRFVMLNGNNGSENDKQIGDAETRDLAFDNQG 172
            NED +   V+ N   + R+   V   ++ + V++   +G E   +  ++E  +L      
Sbjct: 7    NEDVKGKDVDENLISDSRKSEKVENEDEVKSVVVVETDGDEEGNKGDNSEIEELDLATF- 65

Query: 173  NEDVCNRKRKRDCNLELLNWVTKVARDPCNPVIGCLPDASKWKFFGNEQLWKQVLVVRQA 352
             E V +RKRKRD    +LNWVT++A+DPC+PV+G LP+ SKWK +GNE+ WKQVLV R++
Sbjct: 66   EESVSSRKRKRDSIYRMLNWVTEIAKDPCDPVVGSLPEWSKWKSYGNEECWKQVLVTRES 125

Query: 353  MMVKRYADS--SAVRSIWQK-QKMHPAMYEEEHSGSSRHLH-RIASSKIPRAVLSSKRLK 520
            + +KR ADS  SA   + QK QKMHP MY++ H+GSS +L  R+   K+     SS+ L 
Sbjct: 126  LFLKRNADSTSSAEGFVKQKYQKMHPCMYDD-HAGSSYNLRERLKCRKLFPGETSSQAL- 183

Query: 521  AGFCSESTSSGQSDLEDSFGRQSSRLTDSLSGLWLKNFSRKRIPLGVYFQAEVPEWTGKS 700
               CS+S+S+      DS          S     L     KRIP+G  FQAEVPEWTG +
Sbjct: 184  --VCSQSSSAATQTDSDSCMEGVYDGDSSTECSVLDLPITKRIPVGPVFQAEVPEWTGMA 241

Query: 701  DESDSKWLGTRVWPLEKTESCNSLVERDRTGFGRHKQCGCEFEGSFECVKFHVSQKRNRL 880
             ESDSKWLGTRVWPLE T     ++ER+  G GR   CGC+   S +CV+FH++++R+R+
Sbjct: 242  SESDSKWLGTRVWPLE-TSINKFVIEREPIGKGRSDSCGCQVPKSIKCVRFHITERRSRV 300

Query: 881  KMELGMAFYRWDIDMTGEEAAFFWNKADETKFEAIIKSNPPSQDKYFWEEICKNFLHKKR 1060
              ELG AF +W  D  GEE    W+  D+ KF AI++SNP S DK FW+EI + F  ++R
Sbjct: 301  MRELGKAFNQWRFDKMGEEVKLSWSLEDQKKFGAIVRSNPLSLDKCFWDEIFRCFPSRRR 360

Query: 1061 EQLVSYYFNVFLLRRRGLQNRSTP 1132
            E LVSYY+NVFLL+RR  QNRSTP
Sbjct: 361  EDLVSYYYNVFLLQRRANQNRSTP 384


>ref|XP_003529936.1| PREDICTED: uncharacterized protein LOC100779445 [Glycine max]
          Length = 666

 Score =  285 bits (728), Expect = 3e-74
 Identities = 154/399 (38%), Positives = 226/399 (56%), Gaps = 7/399 (1%)
 Frame = +2

Query: 68   NEDRRFVMLNGNNGSENDKQIGDAETRDLAFDNQGNEDVCNRKRKRDCNLELLNWVTKVA 247
            N+D+  V+    +G ++D +    +  DL+ D   + D  +RKR R+  L++L+WVT  A
Sbjct: 281  NDDKGLVL--DPSGGDSDGRKRKRDMLDLS-DGDSDSDSSDRKRMREFALDMLSWVTGAA 337

Query: 248  RDPCNPVIGCLPDASKWKFFGNEQLWKQVLVVRQAMMVKRYADSSAVRSIWQKQKMHPAM 427
            ++PC+P +G +P+ +KWK + N+++WKQVL+ R++  +KR +D S+ +  WQ QKMHP +
Sbjct: 338  KNPCDPEVGSIPEKAKWKSYSNQEVWKQVLLFRESAFLKRGSDPSSEQRSWQSQKMHPCL 397

Query: 428  YEEEHSGSSRHLHRIASSKIPRAVLSSKRLKAGFCSESTSSGQSDLEDSFGRQSSRLT-- 601
            YE+ H G++ +L               KR K     +ST S +S  + S G ++   +  
Sbjct: 398  YED-HLGTNYNLRD-----------RLKRDKKILVGQSTPSARSSSDSSVGAENRTPSPH 445

Query: 602  -----DSLSGLWLKNFSRKRIPLGVYFQAEVPEWTGKSDESDSKWLGTRVWPLEKTESCN 766
                 D+ SGL     +  RIPLG   QAE+PEWTG   E  SK+ GT +WPL  T +  
Sbjct: 446  TEDPSDANSGL--DRCATVRIPLGANHQAEIPEWTGVISEGYSKFSGTPIWPLA-TANTR 502

Query: 767  SLVERDRTGFGRHKQCGCEFEGSFECVKFHVSQKRNRLKMELGMAFYRWDIDMTGEEAAF 946
             L+ERD  G GR   CGC   GS ECV+FH+++KR ++ +ELG  FY W+ D  GE+   
Sbjct: 503  LLIERDPIGKGRQDSCGCPVPGSVECVRFHITEKRAKVHLELGAVFYDWNFDQVGEDVKL 562

Query: 947  FWNKADETKFEAIIKSNPPSQDKYFWEEICKNFLHKKREQLVSYYFNVFLLRRRGLQNRS 1126
             W + +E KF+ +I+SNPPS + YFW+ I + F  K R  LVSYYFNVF+L RRG QNR 
Sbjct: 563  LWMEEEEKKFKDVIRSNPPSPETYFWDHIFRAFPTKSRADLVSYYFNVFILERRGYQNRH 622

Query: 1127 TPXXXXXXXXXXXXXXXTNCNGHIAAKAPKPIYCSPKKT 1243
            TP                N  G     +   I  +PKK+
Sbjct: 623  TPNNINSDDEDDEAGPLRNVFGQQTQNSRGSILLTPKKS 661


Top