BLASTX nr result

ID: Bupleurum21_contig00004249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004249
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE72072.1| Cyclin B1-4 [Daucus carota]                           385   e-105
gb|AAC41681.1| mitotic cyclin [Petroselinum crispum]                  384   e-104
dbj|BAE72071.1| Cyclin B1-3 [Daucus carota]                           383   e-104
dbj|BAE72070.1| Cyclin B1-2 [Daucus carota]                           362   5e-98
dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]                   348   1e-93

>dbj|BAE72072.1| Cyclin B1-4 [Daucus carota]
          Length = 455

 Score =  385 bits (989), Expect = e-105
 Identities = 199/254 (78%), Positives = 217/254 (85%), Gaps = 1/254 (0%)
 Frame = +1

Query: 43  TEGSSK-KNGQTFTSTLTARSKAAAFGLTKKPIKEMVDIDAADANNELAAVEYVEDMYKF 219
           TEGSSK K GQ FTSTLTARSKAA  GLTKKP  ++VDIDAADANNELAAVEYVEDMYKF
Sbjct: 144 TEGSSKEKKGQAFTSTLTARSKAAC-GLTKKPKVQIVDIDAADANNELAAVEYVEDMYKF 202

Query: 220 YKLVEHESQATNYMNSQPEINEKMRAILIDWLIEVHSKFELMPETLYLTINIVDRYLAKN 399
           YKLVE+E+   +Y +SQPE NEKMRAIL+DWLIEVH+KF+LMPETLYLTINI+DRYLA+ 
Sbjct: 203 YKLVENETMVFDYTHSQPEFNEKMRAILVDWLIEVHNKFDLMPETLYLTINIIDRYLARK 262

Query: 400 TVARKELQLLGISSMLTASKYEEIWAPEVSDFTNISDNAYSSQQVLSMEKKILGGLEWNL 579
           TV RKELQLLGISSMLTASKYEEIWAPEV+DFT ISDNAY+SQQVL MEKKILGGLEWNL
Sbjct: 263 TVPRKELQLLGISSMLTASKYEEIWAPEVNDFTKISDNAYTSQQVLVMEKKILGGLEWNL 322

Query: 580 TVPTPYMFLVRFIKAXXXXXXXXXXXXXXXXXNMAYFLAELGMMNYATVLYCPSMVAASA 759
           TVPTPY+FLVRFIKA                 NM YFLAELG++NYAT+LYCPSM+AASA
Sbjct: 323 TVPTPYVFLVRFIKA--------SLPNEPAVENMTYFLAELGILNYATILYCPSMIAASA 374

Query: 760 VYVARCTLNKAPSW 801
           VY ARCTLNK P W
Sbjct: 375 VYGARCTLNKTPFW 388


>gb|AAC41681.1| mitotic cyclin [Petroselinum crispum]
          Length = 443

 Score =  384 bits (986), Expect = e-104
 Identities = 196/253 (77%), Positives = 216/253 (85%)
 Frame = +1

Query: 43  TEGSSKKNGQTFTSTLTARSKAAAFGLTKKPIKEMVDIDAADANNELAAVEYVEDMYKFY 222
           TEGS KK GQTFTSTLTARSKAAAFGLT+KP +++VDIDAADANNELAAVEYVEDMYKFY
Sbjct: 133 TEGSLKKKGQTFTSTLTARSKAAAFGLTRKPKEQIVDIDAADANNELAAVEYVEDMYKFY 192

Query: 223 KLVEHESQATNYMNSQPEINEKMRAILIDWLIEVHSKFELMPETLYLTINIVDRYLAKNT 402
           KL EHES+  +Y++ QPEIN+KMRAIL+DWLIEVH+KFELMPETLYL INI+DRYL+  +
Sbjct: 193 KLAEHESRVFDYIDFQPEINQKMRAILVDWLIEVHNKFELMPETLYLAINILDRYLSTES 252

Query: 403 VARKELQLLGISSMLTASKYEEIWAPEVSDFTNISDNAYSSQQVLSMEKKILGGLEWNLT 582
           VARKELQL+GISSMLTASKYEEIW PEV+D T ISDNAY++QQVL MEKKILG LEWNLT
Sbjct: 253 VARKELQLVGISSMLTASKYEEIWPPEVNDLTKISDNAYTNQQVLIMEKKILGQLEWNLT 312

Query: 583 VPTPYMFLVRFIKAXXXXXXXXXXXXXXXXXNMAYFLAELGMMNYATVLYCPSMVAASAV 762
           VPTPY+FLVRFIKA                 NMA FL ELGMMNYATV YCPSMVAASAV
Sbjct: 313 VPTPYVFLVRFIKA--------SIPNEPAVENMACFLTELGMMNYATVTYCPSMVAASAV 364

Query: 763 YVARCTLNKAPSW 801
           Y ARCTL+KAP W
Sbjct: 365 YGARCTLDKAPFW 377


>dbj|BAE72071.1| Cyclin B1-3 [Daucus carota]
          Length = 444

 Score =  383 bits (983), Expect = e-104
 Identities = 195/252 (77%), Positives = 217/252 (86%)
 Frame = +1

Query: 46  EGSSKKNGQTFTSTLTARSKAAAFGLTKKPIKEMVDIDAADANNELAAVEYVEDMYKFYK 225
           EGSSKK  QTFTSTLTARSKAAAFG+T+ P +++VDIDAADANNELAAVEYVEDMYK YK
Sbjct: 134 EGSSKKKSQTFTSTLTARSKAAAFGITRTPKEQIVDIDAADANNELAAVEYVEDMYKCYK 193

Query: 226 LVEHESQATNYMNSQPEINEKMRAILIDWLIEVHSKFELMPETLYLTINIVDRYLAKNTV 405
           LVEHES+  +Y++ QPEINEKMRAIL+DWLIEVH+KFELMPETLYLTINIVDRYLA  +V
Sbjct: 194 LVEHESRVFDYIDFQPEINEKMRAILVDWLIEVHNKFELMPETLYLTINIVDRYLATKSV 253

Query: 406 ARKELQLLGISSMLTASKYEEIWAPEVSDFTNISDNAYSSQQVLSMEKKILGGLEWNLTV 585
           ARKELQL+GISSML ASKY+EIWAPEV+DFT ISDNAY++QQVL MEKKIL  LEWNLTV
Sbjct: 254 ARKELQLVGISSMLLASKYDEIWAPEVNDFTKISDNAYTNQQVLVMEKKILSRLEWNLTV 313

Query: 586 PTPYMFLVRFIKAXXXXXXXXXXXXXXXXXNMAYFLAELGMMNYATVLYCPSMVAASAVY 765
           PTPY+FLVRFIKA                 NMAYFLAELG+MNYATV+YCPSM+AASAVY
Sbjct: 314 PTPYVFLVRFIKA--------SIPSEPAVENMAYFLAELGLMNYATVMYCPSMLAASAVY 365

Query: 766 VARCTLNKAPSW 801
            ARCTL+ AP W
Sbjct: 366 GARCTLDTAPFW 377


>dbj|BAE72070.1| Cyclin B1-2 [Daucus carota]
          Length = 456

 Score =  362 bits (929), Expect = 5e-98
 Identities = 187/252 (74%), Positives = 208/252 (82%)
 Frame = +1

Query: 46  EGSSKKNGQTFTSTLTARSKAAAFGLTKKPIKEMVDIDAADANNELAAVEYVEDMYKFYK 225
           E SS KNGQT TSTLTARSKAA  G+ KKP +++VDIDAADA NELAAVEYVEDMYKFYK
Sbjct: 151 EASSSKNGQTLTSTLTARSKAAC-GINKKPKEQIVDIDAADATNELAAVEYVEDMYKFYK 209

Query: 226 LVEHESQATNYMNSQPEINEKMRAILIDWLIEVHSKFELMPETLYLTINIVDRYLAKNTV 405
             E ESQ ++YM+SQPEIN+KMRAIL+DWLIEV +KFEL PETLYLT+NIVDRYLA   V
Sbjct: 210 EAETESQVSDYMDSQPEINQKMRAILVDWLIEVQNKFELSPETLYLTVNIVDRYLATKMV 269

Query: 406 ARKELQLLGISSMLTASKYEEIWAPEVSDFTNISDNAYSSQQVLSMEKKILGGLEWNLTV 585
           AR+ELQLLGIS+ML ASKYEEIWAPEV+DF  ISD AY++QQVL+MEKK+LG LEW+LTV
Sbjct: 270 ARRELQLLGISAMLLASKYEEIWAPEVNDFVCISDRAYTNQQVLTMEKKVLGRLEWSLTV 329

Query: 586 PTPYMFLVRFIKAXXXXXXXXXXXXXXXXXNMAYFLAELGMMNYATVLYCPSMVAASAVY 765
           PTPY+FLVRFIKA                 NM YFLAELGMMNYATV+Y PSMVAASAVY
Sbjct: 330 PTPYVFLVRFIKA--------SLPNEPDVNNMTYFLAELGMMNYATVMYLPSMVAASAVY 381

Query: 766 VARCTLNKAPSW 801
            ARCTLNK P W
Sbjct: 382 AARCTLNKTPVW 393


>dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]
          Length = 436

 Score =  348 bits (892), Expect = 1e-93
 Identities = 180/250 (72%), Positives = 202/250 (80%), Gaps = 1/250 (0%)
 Frame = +1

Query: 55  SKKNGQTFTSTLTARSKAAAFGLTKKPIKEMVDIDAADANNELAAVEYVEDMYKFYKLVE 234
           SKK+  T TSTLTARSKAA  GL+KKP  +++DIDAADA+NELA VEYVED+YKFYK+ E
Sbjct: 137 SKKDAPTLTSTLTARSKAAC-GLSKKPKDQIIDIDAADADNELAVVEYVEDIYKFYKIAE 195

Query: 235 HESQATNYMNSQPEINEKMRAILIDWLIEVHSKFELMPETLYLTINIVDRYLAKNTVARK 414
           +ES+  NYM+SQPEIN+KMRAILIDWLIEVH KFEL PETLYLTINIVDRYLA  T  RK
Sbjct: 196 NESRVHNYMDSQPEINDKMRAILIDWLIEVHHKFELNPETLYLTINIVDRYLAVQTTLRK 255

Query: 415 ELQLLGISSMLTASKYEEIWAPEVSDFTNISDNAYSSQQVLSMEKKILGGLEWNLTVPTP 594
           ELQL+G+S+ML ASKYEEIWAPEV+DF  ISD AYS QQVL MEK+ILGGLEWNLTVPTP
Sbjct: 256 ELQLVGMSAMLIASKYEEIWAPEVNDFVCISDRAYSHQQVLVMEKRILGGLEWNLTVPTP 315

Query: 595 YMFLVRFIKAXXXXXXXXXXXXXXXXXNMAYFLAELGMMNYA-TVLYCPSMVAASAVYVA 771
           Y+FLVRFIKA                 NM YF AELGMMNY+  ++YC SM+AASAVY A
Sbjct: 316 YVFLVRFIKA---------SVPDSNMENMVYFFAELGMMNYSVAMMYCSSMIAASAVYAA 366

Query: 772 RCTLNKAPSW 801
           RCT NK PSW
Sbjct: 367 RCTFNKTPSW 376


Top