BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004245
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]   245   6e-63
ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|2...   236   3e-60
ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containi...   235   8e-60
ref|XP_002533788.1| pentatricopeptide repeat-containing protein,...   231   2e-58
ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   212   6e-53

>emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]
          Length = 444

 Score =  245 bits (626), Expect = 6e-63
 Identities = 124/219 (56%), Positives = 162/219 (73%), Gaps = 1/219 (0%)
 Frame = -2

Query: 746 ALLRQSQKAGVFGNMSNAMVYSTFLS-LDEKKTLDSDTVQPCGKSGLAASLVRQLREEQE 570
           ALL+Q +KAG+  ++S+ MV +T LS + +K  + + T     KSGLA SLVR+++++++
Sbjct: 225 ALLKQMRKAGLIVDLSDEMVMTTCLSGVVDKNRMHTRTSTSIWKSGLAESLVREMKKQEK 284

Query: 569 EATFLVNELNSSIYFFMKANMIDDAVKAYRRMQEMKLNTTRITFFTLISGYSSLEMYREI 390
               +V + NSSIYFF KA MIDDA++ Y RMQEMK+  T  TF  L+ GYS L MYREI
Sbjct: 285 AILPVVYKFNSSIYFFCKAKMIDDALRIYGRMQEMKIEPTVQTFINLVYGYSCLNMYREI 344

Query: 389 TILWGDMKRNMQSKNLEIDRDMYELLLCNFIRGGYFERVMEVISQTKDHGMYMDKWMYKR 210
           TILWGD+K + +S +L + RD+YE L+ NF+RGGYFERVMEVI   K+  MY DKWMYKR
Sbjct: 345 TILWGDIKSSRKSGSLVVCRDLYEFLVLNFLRGGYFERVMEVIGCMKEQNMYCDKWMYKR 404

Query: 209 EFLKYHKDLYWNLKASDAKNEVQSNRIEYVQAFRKWVGI 93
           EFLK+HKDLY NLKAS+ + E QS R+EYV+AFR W GI
Sbjct: 405 EFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRTWAGI 443


>ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|222870305|gb|EEF07436.1|
            predicted protein [Populus trichocarpa]
          Length = 701

 Score =  236 bits (603), Expect = 3e-60
 Identities = 122/218 (55%), Positives = 157/218 (72%)
 Frame = -2

Query: 746  ALLRQSQKAGVFGNMSNAMVYSTFLSLDEKKTLDSDTVQPCGKSGLAASLVRQLREEQEE 567
            ALLR+ +KAG   N+S+ MV +  LS        S +     KS L   L+R++REE++ 
Sbjct: 488  ALLRKMRKAGFVVNLSDEMVATACLSEAANNASSSSS-----KSDLIDFLIREMREEEKA 542

Query: 566  ATFLVNELNSSIYFFMKANMIDDAVKAYRRMQEMKLNTTRITFFTLISGYSSLEMYREIT 387
               +  ELNSSIY+F KA M++DA+K Y+RMQ MK+  T  TF  LI G+SSL MYR+IT
Sbjct: 543  IPSVGYELNSSIYYFCKAKMMEDALKTYKRMQHMKIQPTVQTFSYLIDGFSSLGMYRDIT 602

Query: 386  ILWGDMKRNMQSKNLEIDRDMYELLLCNFIRGGYFERVMEVISQTKDHGMYMDKWMYKRE 207
            ILWGD+KRN+ SK+LE+ RD+YE+L  NF+RGGYFER MEVI   K+  MY DKWMYK E
Sbjct: 603  ILWGDIKRNVGSKDLEVSRDLYEVLHLNFLRGGYFERAMEVIGYMKERNMYCDKWMYKDE 662

Query: 206  FLKYHKDLYWNLKASDAKNEVQSNRIEYVQAFRKWVGI 93
            FLK HK+LY +LKAS+A+ E QS R+E+V+AFRKWVGI
Sbjct: 663  FLKLHKNLYRSLKASEARTEAQSKRLEHVKAFRKWVGI 700


>ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containing protein At4g17616-like
            [Glycine max]
          Length = 684

 Score =  235 bits (599), Expect = 8e-60
 Identities = 121/218 (55%), Positives = 158/218 (72%)
 Frame = -2

Query: 746  ALLRQSQKAGVFGNMSNAMVYSTFLSLDEKKTLDSDTVQPCGKSGLAASLVRQLREEQEE 567
            ALL+Q +K G+   +S+  +        ++  L  +T+   GK+ LA +LV+ L++E + 
Sbjct: 474  ALLKQMKKVGLDKGLSDDAI--------DEHNLCEETLNSLGKADLAIALVQILKDEDQT 525

Query: 566  ATFLVNELNSSIYFFMKANMIDDAVKAYRRMQEMKLNTTRITFFTLISGYSSLEMYREIT 387
               LV  LNSSI+FF KA MI+DA++AYRRM +MK+  T  TF  L+ GYSSL MYREIT
Sbjct: 526  VFPLVYNLNSSIFFFCKAGMIEDALRAYRRMVDMKIQPTSQTFAFLMCGYSSLGMYREIT 585

Query: 386  ILWGDMKRNMQSKNLEIDRDMYELLLCNFIRGGYFERVMEVISQTKDHGMYMDKWMYKRE 207
            ILWGD+KR M+S NL  +RD+YELLL NF+RGGYFERV+EVIS  +DH MY DKWMYK E
Sbjct: 586  ILWGDIKRFMRSGNLVGNRDLYELLLLNFLRGGYFERVLEVISHMRDHNMYPDKWMYKNE 645

Query: 206  FLKYHKDLYWNLKASDAKNEVQSNRIEYVQAFRKWVGI 93
            FL+ HK+LY +LKAS+ + E QS R+E+VQ FRKWVGI
Sbjct: 646  FLRLHKNLYRSLKASNTRTEAQSKRLEHVQEFRKWVGI 683


>ref|XP_002533788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223526289|gb|EEF28601.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 689

 Score =  231 bits (588), Expect = 2e-58
 Identities = 125/218 (57%), Positives = 156/218 (71%)
 Frame = -2

Query: 746  ALLRQSQKAGVFGNMSNAMVYSTFLSLDEKKTLDSDTVQPCGKSGLAASLVRQLREEQEE 567
            AL+RQ +KAG+  N+S  MV   F SL E+    S ++    KS LA  ++++ REE+E 
Sbjct: 477  ALVRQLRKAGLIKNLSVEMV--AFTSLLERADNSSSSLS---KSDLADFIIQETREEKE- 530

Query: 566  ATFLVNELNSSIYFFMKANMIDDAVKAYRRMQEMKLNTTRITFFTLISGYSSLEMYREIT 387
             T  V+ELNSSIYFF KA M+ DA+K YR+MQ   +  T  TF  L+ GYSSL  YR+IT
Sbjct: 531  VTPTVHELNSSIYFFCKAKMMGDALKIYRKMQMKGIQPTVQTFAYLVYGYSSLGSYRDIT 590

Query: 386  ILWGDMKRNMQSKNLEIDRDMYELLLCNFIRGGYFERVMEVISQTKDHGMYMDKWMYKRE 207
            ILWGD+KRNM+++N  + RD+YELLL NF+RGGYFERVMEV    K+  MY DKWMYK E
Sbjct: 591  ILWGDIKRNMKNRNFLVSRDLYELLLVNFLRGGYFERVMEVAGYMKECKMYTDKWMYKSE 650

Query: 206  FLKYHKDLYWNLKASDAKNEVQSNRIEYVQAFRKWVGI 93
            FLK HK+LY  LKASD +NEVQ  R+E+VQ FRKWVGI
Sbjct: 651  FLKLHKNLYKCLKASDTRNEVQRKRLEFVQTFRKWVGI 688


>ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g17616-like, partial [Vitis vinifera]
          Length = 457

 Score =  212 bits (540), Expect = 6e-53
 Identities = 114/218 (52%), Positives = 142/218 (65%)
 Frame = -2

Query: 746 ALLRQSQKAGVFGNMSNAMVYSTFLSLDEKKTLDSDTVQPCGKSGLAASLVRQLREEQEE 567
           ALL+Q +KAG   ++S+ MV +T L   EK      T+ P                    
Sbjct: 268 ALLKQMRKAGFVVDLSDEMVMTTCLLGVEK------TILP-------------------- 301

Query: 566 ATFLVNELNSSIYFFMKANMIDDAVKAYRRMQEMKLNTTRITFFTLISGYSSLEMYREIT 387
              +V E NSSIYFF KA  IDDA++ YRRMQE ++  T  T   L+ GYS L MYREIT
Sbjct: 302 ---VVYEFNSSIYFFCKAKKIDDALRIYRRMQETEIEPTVQTSINLVYGYSCLNMYREIT 358

Query: 386 ILWGDMKRNMQSKNLEIDRDMYELLLCNFIRGGYFERVMEVISQTKDHGMYMDKWMYKRE 207
           ILWG++KR+ +S +L + RD+YE L+ NF+RGGYFERVMEVI   K+  MY DKWMYK E
Sbjct: 359 ILWGNIKRSRESGSLVVCRDLYEFLVLNFLRGGYFERVMEVIGHMKEQNMYCDKWMYKSE 418

Query: 206 FLKYHKDLYWNLKASDAKNEVQSNRIEYVQAFRKWVGI 93
           FLK+HKDLY NLKAS+ + E QS R+EYV+AFRKW GI
Sbjct: 419 FLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRKWAGI 456