BLASTX nr result

ID: Bupleurum21_contig00004243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004243
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555763.1| PREDICTED: pentatricopeptide repeat-containi...    58   9e-07
ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06
emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera]    57   1e-06
ref|XP_003591286.1| Pentatricopeptide repeat-containing protein ...    54   1e-05

>ref|XP_003555763.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Glycine max]
          Length = 289

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/38 (71%), Positives = 29/38 (76%)
 Frame = +1

Query: 7   LEVMKGKGFVADEKEAREALKGKRGPEFRGVMDILFGK 120
           LE MKGKGFV DEK  RE L  KRGP FR V+D+LFGK
Sbjct: 252 LEQMKGKGFVPDEKAVREVLASKRGPVFRNVIDVLFGK 289


>ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Vitis vinifera]
          Length = 307

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/40 (67%), Positives = 29/40 (72%)
 Frame = +1

Query: 1   EFLEVMKGKGFVADEKEAREALKGKRGPEFRGVMDILFGK 120
           EFLE MK KGF  DEK  RE LK +RG  FR +MDILFGK
Sbjct: 268 EFLEQMKAKGFTPDEKAVREILKNRRGQVFRSIMDILFGK 307


>emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera]
          Length = 347

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/40 (67%), Positives = 29/40 (72%)
 Frame = +1

Query: 1   EFLEVMKGKGFVADEKEAREALKGKRGPEFRGVMDILFGK 120
           EFLE MK KGF  DEK  RE LK +RG  FR +MDILFGK
Sbjct: 308 EFLEQMKAKGFTPDEKAVREILKNRRGQVFRSIMDILFGK 347


>ref|XP_003591286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480334|gb|AES61537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 276

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/40 (65%), Positives = 29/40 (72%)
 Frame = +1

Query: 1   EFLEVMKGKGFVADEKEAREALKGKRGPEFRGVMDILFGK 120
           + LE MKGKGFV DE   RE L  KRGP FR V++ILFGK
Sbjct: 237 KLLEEMKGKGFVPDENAVREVLSNKRGPVFRTVINILFGK 276


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