BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004221
         (2193 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               71   1e-09
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    71   1e-09
gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]                70   2e-09
gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thali...    70   2e-09
ref|NP_680382.1| RNase H domain-containing protein [Arabidopsis ...    69   5e-09

>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 44/134 (32%), Positives = 69/134 (51%)
 Frame = -3

Query: 403 ANTGQRVLANTGQRVEAFIRWIAPPVGWMVLNTDXXXXXXXXXXXXXGVFRDYTGKLVYA 224
           A++G  ++  T  RVE  I W++P VGW+ +NTD             GV RD TG     
Sbjct: 541 AHSGNVLVGITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGG 600

Query: 223 FSLNLGTCNTFMAEVKALEYGLEMAVRLGPDKLQVQIDSQVLVHVLKNSQAYAGEAIHNV 44
           FSLN+G C+   AE+  + YGL  A      ++++++DS+V+V  LK   + +      V
Sbjct: 601 FSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLV 660

Query: 43  NRCKLLLEETNWQV 2
             C   L++ +W V
Sbjct: 661 RLCHGFLQK-DWLV 673


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 44/134 (32%), Positives = 69/134 (51%)
 Frame = -3

Query: 403 ANTGQRVLANTGQRVEAFIRWIAPPVGWMVLNTDXXXXXXXXXXXXXGVFRDYTGKLVYA 224
           A++G  ++  T  RVE  I W++P VGW+ +NTD             GV RD TG     
Sbjct: 432 AHSGNVLVGITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGG 491

Query: 223 FSLNLGTCNTFMAEVKALEYGLEMAVRLGPDKLQVQIDSQVLVHVLKNSQAYAGEAIHNV 44
           FSLN+G C+   AE+  + YGL  A      ++++++DS+V+V  LK   + +      V
Sbjct: 492 FSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLV 551

Query: 43  NRCKLLLEETNWQV 2
             C   L++ +W V
Sbjct: 552 RLCHGFLQK-DWLV 564


>gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]
          Length = 253

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 45/136 (33%), Positives = 64/136 (47%)
 Frame = -3

Query: 409 WIANTGQRVLANTGQRVEAFIRWIAPPVGWMVLNTDXXXXXXXXXXXXXGVFRDYTGKLV 230
           W A+  +  +     R E  I W  P VGW  LNTD             GV RD  G   
Sbjct: 63  WKAHVHKMGVTTRTAREERLIAWSPPRVGWFKLNTDGASRGNPRLATAGGVVRDGDGNWC 122

Query: 229 YAFSLNLGTCNTFMAEVKALEYGLEMAVRLGPDKLQVQIDSQVLVHVLKNSQAYAGEAIH 50
           Y FSLN+G C+  +AE+    YGL +A   G  +L+++IDS+++V  L+     +     
Sbjct: 123 YGFSLNIGICSAPLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSF 182

Query: 49  NVNRCKLLLEETNWQV 2
            V  C  LL + +W V
Sbjct: 183 LVRLCHGLLSK-DWSV 197


>gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thaliana]
           gi|55978717|gb|AAV68820.1| hypothetical protein
           AT1G17390 [Arabidopsis thaliana]
          Length = 272

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 45/136 (33%), Positives = 64/136 (47%)
 Frame = -3

Query: 409 WIANTGQRVLANTGQRVEAFIRWIAPPVGWMVLNTDXXXXXXXXXXXXXGVFRDYTGKLV 230
           W A+  +  +     R E  I W  P VGW  LNTD             GV RD  G   
Sbjct: 82  WKAHVHKMGVTTRTAREERLIAWSPPRVGWFKLNTDGASRGNPRLATAGGVVRDGDGNWC 141

Query: 229 YAFSLNLGTCNTFMAEVKALEYGLEMAVRLGPDKLQVQIDSQVLVHVLKNSQAYAGEAIH 50
           Y FSLN+G C+  +AE+    YGL +A   G  +L+++IDS+++V  L+     +     
Sbjct: 142 YGFSLNIGICSAPLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSF 201

Query: 49  NVNRCKLLLEETNWQV 2
            V  C  LL + +W V
Sbjct: 202 LVRLCHGLLSK-DWSV 216


>ref|NP_680382.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|332007502|gb|AED94885.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 258

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 41/134 (30%), Positives = 67/134 (50%)
 Frame = -3

Query: 403 ANTGQRVLANTGQRVEAFIRWIAPPVGWMVLNTDXXXXXXXXXXXXXGVFRDYTGKLVYA 224
           A+ G  ++ +T  RVE  I W+ P VGW+ +NTD             GV RD  G     
Sbjct: 120 AHLGNALVGSTQPRVERLIGWVLPCVGWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGG 179

Query: 223 FSLNLGTCNTFMAEVKALEYGLEMAVRLGPDKLQVQIDSQVLVHVLKNSQAYAGEAIHNV 44
           FSLN+G C+   AE+  + YGL  A      ++++++DS+ +V  LK   + +      V
Sbjct: 180 FSLNIGRCSAQHAELWGVYYGLYFAWEKKVPRVELEVDSEAIVGFLKTGISDSHPLSFLV 239

Query: 43  NRCKLLLEETNWQV 2
             C   L++ +W++
Sbjct: 240 RLCHNFLQK-DWRI 252