BLASTX nr result

ID: Bupleurum21_contig00004218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004218
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612317.1| Isocitrate dehydrogenase [Medicago truncatul...   498   e-138
ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus ...   497   e-138
ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] re...   496   e-138
ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] re...   493   e-137
ref|XP_003547899.1| PREDICTED: isocitrate dehydrogenase [NAD] re...   491   e-136

>ref|XP_003612317.1| Isocitrate dehydrogenase [Medicago truncatula]
           gi|355513652|gb|AES95275.1| Isocitrate dehydrogenase
           [Medicago truncatula]
          Length = 367

 Score =  498 bits (1281), Expect = e-138
 Identities = 248/288 (86%), Positives = 259/288 (89%)
 Frame = -2

Query: 865 RSVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVLFEKFECHGDMKAVPP 686
           R+VTYMPRPGDG PRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVLFEKFE HG+MKA+P 
Sbjct: 24  RTVTYMPRPGDGTPRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVLFEKFEVHGNMKAIPS 83

Query: 685 EVMESIKRNKVCLKGGLMTPMGGGISSLNLQLRKELDLYASLVNCFNLPGLPTRHENVDI 506
           EVMESIK+NKVCLKGGL TPMGGG+SSLNLQLRKELDLYASLVNCFNL GL TRH+NVDI
Sbjct: 84  EVMESIKKNKVCLKGGLATPMGGGVSSLNLQLRKELDLYASLVNCFNLEGLTTRHDNVDI 143

Query: 505 VVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKMVTAVHKAN 326
           VVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRK VTAVHKAN
Sbjct: 144 VVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKAN 203

Query: 325 IMKLADGLFLESCREVASKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVXXX 146
           IMKLADGLFLESCREVA+KYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLV   
Sbjct: 204 IMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANT 263

Query: 145 XXXXXXXXXXXXXXXXXGDHAIFEQGASAGNVGKVELVQQKKANPVAL 2
                             DHA+FEQGASAGNVGK ++VQ+KKANPVAL
Sbjct: 264 AAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGKEKVVQEKKANPVAL 311


>ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus communis]
           gi|223531764|gb|EEF33583.1| isocitrate dehydrogenase,
           putative [Ricinus communis]
          Length = 372

 Score =  497 bits (1280), Expect = e-138
 Identities = 248/290 (85%), Positives = 259/290 (89%)
 Frame = -2

Query: 871 SARSVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVLFEKFECHGDMKAV 692
           S RSVTYMPRPGDGAPR VTLIPGDGIGPLVTGAVEQVMEAMHAPV FE++E HGDMK V
Sbjct: 27  SRRSVTYMPRPGDGAPRGVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFERYEVHGDMKKV 86

Query: 691 PPEVMESIKRNKVCLKGGLMTPMGGGISSLNLQLRKELDLYASLVNCFNLPGLPTRHENV 512
           P EV+ESIK+NKVCLKGGL TPMGGG+SSLN+QLRKELDLYASLVNCFNLPGLPTRHENV
Sbjct: 87  PAEVIESIKKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHENV 146

Query: 511 DIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKMVTAVHK 332
           DIVVIRENTEGEY+GLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRK VTAVHK
Sbjct: 147 DIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHK 206

Query: 331 ANIMKLADGLFLESCREVASKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVX 152
           ANIMKLADGLFLESCREVA+KYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLV 
Sbjct: 207 ANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVA 266

Query: 151 XXXXXXXXXXXXXXXXXXXGDHAIFEQGASAGNVGKVELVQQKKANPVAL 2
                               DHAIFEQGASAGNVG  ++V+QKKANPVAL
Sbjct: 267 NTAAGIAGGTGVMPGGNVGADHAIFEQGASAGNVGNEKIVEQKKANPVAL 316


>ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
           mitochondrial-like [Cucumis sativus]
          Length = 381

 Score =  496 bits (1277), Expect = e-138
 Identities = 245/289 (84%), Positives = 259/289 (89%)
 Frame = -2

Query: 868 ARSVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVLFEKFECHGDMKAVP 689
           +RSVTYMPRPGDGAPR VTLIPGDGIGPLVTGAVEQVM+AMHAPV FEKFE HGDMK VP
Sbjct: 37  SRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTGAVEQVMDAMHAPVYFEKFEIHGDMKKVP 96

Query: 688 PEVMESIKRNKVCLKGGLMTPMGGGISSLNLQLRKELDLYASLVNCFNLPGLPTRHENVD 509
            EV++SIK+NKVCLKGGL+TP+GGG+SSLN+QLRKELDLYASLVNCFNLPGLPTRHENVD
Sbjct: 97  QEVIDSIKKNKVCLKGGLVTPVGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHENVD 156

Query: 508 IVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKMVTAVHKA 329
           IVVIRENTEGEY+GLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRK VTAVHKA
Sbjct: 157 IVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKA 216

Query: 328 NIMKLADGLFLESCREVASKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVXX 149
           NIMKLADGLFLESCREVA+KYPGIKYNE+IVDNCCMQLVSKPEQFDVMVTPNLYGNLV  
Sbjct: 217 NIMKLADGLFLESCREVATKYPGIKYNEVIVDNCCMQLVSKPEQFDVMVTPNLYGNLVAN 276

Query: 148 XXXXXXXXXXXXXXXXXXGDHAIFEQGASAGNVGKVELVQQKKANPVAL 2
                              DHA+FEQGASAGNVG   LV+QKKANPVAL
Sbjct: 277 TAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNERLVEQKKANPVAL 325


>ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
           mitochondrial-like [Vitis vinifera]
          Length = 375

 Score =  493 bits (1268), Expect = e-137
 Identities = 244/292 (83%), Positives = 259/292 (88%)
 Frame = -2

Query: 877 FESARSVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVLFEKFECHGDMK 698
           F   RSVTYMPRPGDGAPR VTLIPGDGIGPLVTGAVEQVM+AMHAPV FE++E HGDMK
Sbjct: 28  FAPKRSVTYMPRPGDGAPRPVTLIPGDGIGPLVTGAVEQVMDAMHAPVYFERYEVHGDMK 87

Query: 697 AVPPEVMESIKRNKVCLKGGLMTPMGGGISSLNLQLRKELDLYASLVNCFNLPGLPTRHE 518
            VP EV+ESI++NKVCLKGGL TPMGGG+SSLN+QLRKELDLYASLVNCFNLPGLPTRH+
Sbjct: 88  KVPEEVLESIRKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHQ 147

Query: 517 NVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKMVTAV 338
           NVDIVVIRENTEGEY+GLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRK VTAV
Sbjct: 148 NVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAV 207

Query: 337 HKANIMKLADGLFLESCREVASKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNL 158
           HKANIMKLADGLFLESCREVA+KYPGIKY+EIIVDNCCMQLVSKPEQFDVMVTPNLYGNL
Sbjct: 208 HKANIMKLADGLFLESCREVATKYPGIKYSEIIVDNCCMQLVSKPEQFDVMVTPNLYGNL 267

Query: 157 VXXXXXXXXXXXXXXXXXXXXGDHAIFEQGASAGNVGKVELVQQKKANPVAL 2
           V                     DHA+FEQGASAGNVG  +LV+QKKANPVAL
Sbjct: 268 VANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGHQKLVEQKKANPVAL 319


>ref|XP_003547899.1| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
           mitochondrial-like [Glycine max]
          Length = 363

 Score =  491 bits (1263), Expect = e-136
 Identities = 242/289 (83%), Positives = 260/289 (89%)
 Frame = -2

Query: 868 ARSVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVLFEKFECHGDMKAVP 689
           ARSVTYM RPGDG+PR VTLIPGDGIGP+VTGAVEQVMEAMHAPV FEKFE HG+MKAVP
Sbjct: 19  ARSVTYMHRPGDGSPRPVTLIPGDGIGPMVTGAVEQVMEAMHAPVYFEKFEVHGNMKAVP 78

Query: 688 PEVMESIKRNKVCLKGGLMTPMGGGISSLNLQLRKELDLYASLVNCFNLPGLPTRHENVD 509
           PEV++SI++NKVCLKGGL+TPMGGG+SSLN+QLRKELDLYASLVNCFNLPGLPTRH+NVD
Sbjct: 79  PEVLDSIRKNKVCLKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVD 138

Query: 508 IVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKMVTAVHKA 329
           IVVIRENTEGEY+GLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRK VTAVHKA
Sbjct: 139 IVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKA 198

Query: 328 NIMKLADGLFLESCREVASKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVXX 149
           NIMKLADGLFLESCREVA+KYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLV  
Sbjct: 199 NIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVAN 258

Query: 148 XXXXXXXXXXXXXXXXXXGDHAIFEQGASAGNVGKVELVQQKKANPVAL 2
                              +HA+FEQGASAGNVG  ++ +QKKANPVAL
Sbjct: 259 TAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGSDKIREQKKANPVAL 307


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