BLASTX nr result

ID: Bupleurum21_contig00004217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004217
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus ...   478   e-133
ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] re...   476   e-132
ref|XP_003537678.1| PREDICTED: isocitrate dehydrogenase [NAD] re...   474   e-131
ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] re...   474   e-131
ref|XP_003612317.1| Isocitrate dehydrogenase [Medicago truncatul...   474   e-131

>ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus communis]
           gi|223531764|gb|EEF33583.1| isocitrate dehydrogenase,
           putative [Ricinus communis]
          Length = 372

 Score =  478 bits (1230), Expect = e-133
 Identities = 244/288 (84%), Positives = 252/288 (87%)
 Frame = -1

Query: 866 SSSYDHLRCLPSRFDSSRSVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQVMEAMHAP 687
           SSS +   C  SR  S RSVTYMPRPGDGAPR VTLIPGDGIGPLVTGAVEQVMEAMHAP
Sbjct: 14  SSSNNESTC--SRLVSRRSVTYMPRPGDGAPRGVTLIPGDGIGPLVTGAVEQVMEAMHAP 71

Query: 686 VLFEKFECHGDMKAVPTEVMESIKRNKVCLKGGLMTPMGGGVSSLNLQLRKELDLYASLV 507
           V FE++E HGDMK VP EV+ESIK+NKVCLKGGL TPMGGGVSSLN+QLRKELDLYASLV
Sbjct: 72  VYFERYEVHGDMKKVPAEVIESIKKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLV 131

Query: 506 NCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFE 327
           NCFNLPGLPTRHENVDIVVIRENTEGEY+GLEHEVVPGVVESLKVITKFCSERIAKYAFE
Sbjct: 132 NCFNLPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFE 191

Query: 326 YAYLNNRKMVTAVHKANIMKLADGLFLESCREVASKYPSIKYNEIIVDNCCMQLVSKPEQ 147
           YAYLNNRK VTAVHKANIMKLADGLFLESCREVA+KYP IKYNEIIVDNCCMQLVSKPEQ
Sbjct: 192 YAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQ 251

Query: 146 FDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXGADHAIFEQGASAGN 3
           FDVMVTPNLYGNLV                   GADHAIFEQGASAGN
Sbjct: 252 FDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAIFEQGASAGN 299


>ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
           mitochondrial-like [Cucumis sativus]
          Length = 381

 Score =  476 bits (1224), Expect = e-132
 Identities = 238/281 (84%), Positives = 250/281 (88%), Gaps = 1/281 (0%)
 Frame = -1

Query: 842 CLPSRFDS-SRSVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVLFEKFE 666
           C  S  D+ SRSVTYMPRPGDGAPR VTLIPGDGIGPLVTGAVEQVM+AMHAPV FEKFE
Sbjct: 28  CFKSSIDAQSRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTGAVEQVMDAMHAPVYFEKFE 87

Query: 665 CHGDMKAVPTEVMESIKRNKVCLKGGLMTPMGGGVSSLNLQLRKELDLYASLVNCFNLPG 486
            HGDMK VP EV++SIK+NKVCLKGGL+TP+GGGVSSLN+QLRKELDLYASLVNCFNLPG
Sbjct: 88  IHGDMKKVPQEVIDSIKKNKVCLKGGLVTPVGGGVSSLNVQLRKELDLYASLVNCFNLPG 147

Query: 485 LPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNR 306
           LPTRHENVDIVVIRENTEGEY+GLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNR
Sbjct: 148 LPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNR 207

Query: 305 KMVTAVHKANIMKLADGLFLESCREVASKYPSIKYNEIIVDNCCMQLVSKPEQFDVMVTP 126
           K VTAVHKANIMKLADGLFLESCREVA+KYP IKYNE+IVDNCCMQLVSKPEQFDVMVTP
Sbjct: 208 KKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEVIVDNCCMQLVSKPEQFDVMVTP 267

Query: 125 NLYGNLVXXXXXXXXXXXXXXXXXXXGADHAIFEQGASAGN 3
           NLYGNLV                   GADHA+FEQGASAGN
Sbjct: 268 NLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGN 308


>ref|XP_003537678.1| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
           mitochondrial-like [Glycine max]
          Length = 364

 Score =  474 bits (1220), Expect = e-131
 Identities = 236/282 (83%), Positives = 251/282 (89%)
 Frame = -1

Query: 848 LRCLPSRFDSSRSVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVLFEKF 669
           L+ L +R + SRSVTYMPRPGDG PR VTLIPGDGIGPLVTGAVEQVMEAMHAP+ FEK+
Sbjct: 10  LKHLLTRLNPSRSVTYMPRPGDGTPRGVTLIPGDGIGPLVTGAVEQVMEAMHAPLYFEKY 69

Query: 668 ECHGDMKAVPTEVMESIKRNKVCLKGGLMTPMGGGVSSLNLQLRKELDLYASLVNCFNLP 489
           E HGDMKAVP EV+ESI++NKVCLKGGL TPMGGGV+SLN+QLRKELDLYASLVNCFNLP
Sbjct: 70  EVHGDMKAVPAEVLESIRKNKVCLKGGLATPMGGGVNSLNVQLRKELDLYASLVNCFNLP 129

Query: 488 GLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNN 309
           GLPTRH+NVDIVVIRENTEGEY+GLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNN
Sbjct: 130 GLPTRHDNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNN 189

Query: 308 RKMVTAVHKANIMKLADGLFLESCREVASKYPSIKYNEIIVDNCCMQLVSKPEQFDVMVT 129
           RK VTAVHKANIMKLADGLFLESCREVA++YP IKYNEIIVDNCCMQLVSKPEQFDVMVT
Sbjct: 190 RKKVTAVHKANIMKLADGLFLESCREVATRYPGIKYNEIIVDNCCMQLVSKPEQFDVMVT 249

Query: 128 PNLYGNLVXXXXXXXXXXXXXXXXXXXGADHAIFEQGASAGN 3
           PNLYGNLV                   GADHA+FEQGASAGN
Sbjct: 250 PNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGN 291


>ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
           mitochondrial-like [Vitis vinifera]
          Length = 375

 Score =  474 bits (1220), Expect = e-131
 Identities = 239/288 (82%), Positives = 253/288 (87%)
 Frame = -1

Query: 866 SSSYDHLRCLPSRFDSSRSVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQVMEAMHAP 687
           SSSY+    + SRF   RSVTYMPRPGDGAPR VTLIPGDGIGPLVTGAVEQVM+AMHAP
Sbjct: 16  SSSYN-TNFIGSRFAPKRSVTYMPRPGDGAPRPVTLIPGDGIGPLVTGAVEQVMDAMHAP 74

Query: 686 VLFEKFECHGDMKAVPTEVMESIKRNKVCLKGGLMTPMGGGVSSLNLQLRKELDLYASLV 507
           V FE++E HGDMK VP EV+ESI++NKVCLKGGL TPMGGGVSSLN+QLRKELDLYASLV
Sbjct: 75  VYFERYEVHGDMKKVPEEVLESIRKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLV 134

Query: 506 NCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFE 327
           NCFNLPGLPTRH+NVDIVVIRENTEGEY+GLEHEVVPGVVESLKVITKFCSERIAKYAFE
Sbjct: 135 NCFNLPGLPTRHQNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFE 194

Query: 326 YAYLNNRKMVTAVHKANIMKLADGLFLESCREVASKYPSIKYNEIIVDNCCMQLVSKPEQ 147
           YAYLNNRK VTAVHKANIMKLADGLFLESCREVA+KYP IKY+EIIVDNCCMQLVSKPEQ
Sbjct: 195 YAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYSEIIVDNCCMQLVSKPEQ 254

Query: 146 FDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXGADHAIFEQGASAGN 3
           FDVMVTPNLYGNLV                   GADHA+FEQGASAGN
Sbjct: 255 FDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGN 302


>ref|XP_003612317.1| Isocitrate dehydrogenase [Medicago truncatula]
           gi|355513652|gb|AES95275.1| Isocitrate dehydrogenase
           [Medicago truncatula]
          Length = 367

 Score =  474 bits (1219), Expect = e-131
 Identities = 239/283 (84%), Positives = 247/283 (87%)
 Frame = -1

Query: 851 HLRCLPSRFDSSRSVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVLFEK 672
           HL          R+VTYMPRPGDG PRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVLFEK
Sbjct: 12  HLISTRHHLTHHRTVTYMPRPGDGTPRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVLFEK 71

Query: 671 FECHGDMKAVPTEVMESIKRNKVCLKGGLMTPMGGGVSSLNLQLRKELDLYASLVNCFNL 492
           FE HG+MKA+P+EVMESIK+NKVCLKGGL TPMGGGVSSLNLQLRKELDLYASLVNCFNL
Sbjct: 72  FEVHGNMKAIPSEVMESIKKNKVCLKGGLATPMGGGVSSLNLQLRKELDLYASLVNCFNL 131

Query: 491 PGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLN 312
            GL TRH+NVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLN
Sbjct: 132 EGLTTRHDNVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLN 191

Query: 311 NRKMVTAVHKANIMKLADGLFLESCREVASKYPSIKYNEIIVDNCCMQLVSKPEQFDVMV 132
           NRK VTAVHKANIMKLADGLFLESCREVA+KYP IKYNEIIVDNCCMQLVSKPEQFDVMV
Sbjct: 192 NRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMV 251

Query: 131 TPNLYGNLVXXXXXXXXXXXXXXXXXXXGADHAIFEQGASAGN 3
           TPNLYGNLV                   GADHA+FEQGASAGN
Sbjct: 252 TPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGN 294


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