BLASTX nr result

ID: Bupleurum21_contig00004212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004212
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283168.2| PREDICTED: fumarate hydratase 2, chloroplast...   189   3e-46
ref|NP_182273.1| fumarate hydratase, class II [Arabidopsis thali...   187   1e-45
ref|XP_004152237.1| PREDICTED: fumarate hydratase 1, mitochondri...   186   2e-45
ref|XP_002302734.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45
ref|XP_002273033.1| PREDICTED: fumarate hydratase 1, mitochondri...   184   5e-45

>ref|XP_002283168.2| PREDICTED: fumarate hydratase 2, chloroplastic-like [Vitis
           vinifera] gi|296089733|emb|CBI39552.3| unnamed protein
           product [Vitis vinifera]
          Length = 496

 Score =  189 bits (479), Expect = 3e-46
 Identities = 96/106 (90%), Positives = 101/106 (95%)
 Frame = -3

Query: 383 NVYKPMIANGLLHSLRLLADASASFEKNCVRGIAANRERISKLLHESLMLVTSLNPKIGY 204
           NVYKP+IA+GLL SLRLL DASASFEKNC+RGI AN+ERISKLLHESLMLVTSLNPKIGY
Sbjct: 391 NVYKPLIASGLLRSLRLLGDASASFEKNCIRGIQANQERISKLLHESLMLVTSLNPKIGY 450

Query: 203 DNAAAVAKKAHKEGTTLKEAALNLKVLTSEEFDKLVVPEKMIGPSD 66
           DNAAAVAKKAHKEGTTLK AALNL VLTSEEF+KLVVPEKMIGPSD
Sbjct: 451 DNAAAVAKKAHKEGTTLKHAALNLGVLTSEEFEKLVVPEKMIGPSD 496


>ref|NP_182273.1| fumarate hydratase, class II [Arabidopsis thaliana]
           gi|145331433|ref|NP_001078075.1| fumarate hydratase,
           class II [Arabidopsis thaliana]
           gi|39931311|sp|P93033.2|FUM1_ARATH RecName:
           Full=Fumarate hydratase 1, mitochondrial; Short=Fumarase
           1; Flags: Precursor gi|2443751|gb|AAB71399.1| fumarase
           [Arabidopsis thaliana] gi|2529676|gb|AAC62859.1|
           putative fumarase [Arabidopsis thaliana]
           gi|15809968|gb|AAL06911.1| At2g47510/T30B22.19
           [Arabidopsis thaliana] gi|17064768|gb|AAL32538.1|
           putative fumarase [Arabidopsis thaliana]
           gi|28059023|gb|AAO29979.1| putative fumarase
           [Arabidopsis thaliana] gi|330255758|gb|AEC10852.1|
           fumarate hydratase, class II [Arabidopsis thaliana]
           gi|330255759|gb|AEC10853.1| fumarate hydratase, class II
           [Arabidopsis thaliana]
          Length = 492

 Score =  187 bits (474), Expect = 1e-45
 Identities = 95/106 (89%), Positives = 101/106 (95%)
 Frame = -3

Query: 383 NVYKPMIANGLLHSLRLLADASASFEKNCVRGIAANRERISKLLHESLMLVTSLNPKIGY 204
           NV+KP+IA+ LLHS+RL+ADASASFEKNCVRGI ANRERISKLLHESLMLVTSLNPKIGY
Sbjct: 387 NVFKPVIASALLHSVRLIADASASFEKNCVRGIEANRERISKLLHESLMLVTSLNPKIGY 446

Query: 203 DNAAAVAKKAHKEGTTLKEAALNLKVLTSEEFDKLVVPEKMIGPSD 66
           DNAAAVAKKAHKEG TLKEAALNL VLT+EEFD LVVPEKMIGPSD
Sbjct: 447 DNAAAVAKKAHKEGCTLKEAALNLGVLTAEEFDTLVVPEKMIGPSD 492


>ref|XP_004152237.1| PREDICTED: fumarate hydratase 1, mitochondrial-like [Cucumis
           sativus] gi|449484240|ref|XP_004156827.1| PREDICTED:
           fumarate hydratase 1, mitochondrial-like [Cucumis
           sativus]
          Length = 495

 Score =  186 bits (472), Expect = 2e-45
 Identities = 95/106 (89%), Positives = 99/106 (93%)
 Frame = -3

Query: 383 NVYKPMIANGLLHSLRLLADASASFEKNCVRGIAANRERISKLLHESLMLVTSLNPKIGY 204
           NVYKPMIAN LLHSLRLL DASASFEKNCVRGI ANRERISKLLHESLMLVT+LNPKIGY
Sbjct: 389 NVYKPMIANALLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTALNPKIGY 448

Query: 203 DNAAAVAKKAHKEGTTLKEAALNLKVLTSEEFDKLVVPEKMIGPSD 66
           DNAAAVAKKAHKEG+TLKEAAL L VL+ E+FDK VVPEKMIGPSD
Sbjct: 449 DNAAAVAKKAHKEGSTLKEAALKLGVLSEEDFDKHVVPEKMIGPSD 494


>ref|XP_002302734.1| predicted protein [Populus trichocarpa] gi|222844460|gb|EEE82007.1|
           predicted protein [Populus trichocarpa]
          Length = 490

 Score =  185 bits (469), Expect = 4e-45
 Identities = 94/106 (88%), Positives = 100/106 (94%)
 Frame = -3

Query: 383 NVYKPMIANGLLHSLRLLADASASFEKNCVRGIAANRERISKLLHESLMLVTSLNPKIGY 204
           NV+KPMIA+GLLHS+RLL DASASFEKNCVRGI ANRERISKLLHESLMLVTSLNPKIGY
Sbjct: 385 NVFKPMIASGLLHSIRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGY 444

Query: 203 DNAAAVAKKAHKEGTTLKEAALNLKVLTSEEFDKLVVPEKMIGPSD 66
           DNAAAVAK AHKEG+TLKEAAL L +LTSEEFD LVVPEKMIGP+D
Sbjct: 445 DNAAAVAKLAHKEGSTLKEAALKLGMLTSEEFDTLVVPEKMIGPTD 490


>ref|XP_002273033.1| PREDICTED: fumarate hydratase 1, mitochondrial [Vitis vinifera]
           gi|297743928|emb|CBI36898.3| unnamed protein product
           [Vitis vinifera]
          Length = 494

 Score =  184 bits (468), Expect = 5e-45
 Identities = 94/106 (88%), Positives = 100/106 (94%)
 Frame = -3

Query: 383 NVYKPMIANGLLHSLRLLADASASFEKNCVRGIAANRERISKLLHESLMLVTSLNPKIGY 204
           NV+KP+IA+GLL S+RLL DASASFEKNCVRGI AN+ERI KLLHESLMLVTSLNPKIGY
Sbjct: 389 NVFKPLIASGLLRSIRLLGDASASFEKNCVRGIQANKERILKLLHESLMLVTSLNPKIGY 448

Query: 203 DNAAAVAKKAHKEGTTLKEAALNLKVLTSEEFDKLVVPEKMIGPSD 66
           DNAAAVAKKAHKEG TLKEAALNL VLTSEEFD+LVVPEKMIGPSD
Sbjct: 449 DNAAAVAKKAHKEGRTLKEAALNLGVLTSEEFDQLVVPEKMIGPSD 494


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