BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004203
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266159.1| PREDICTED: phytochrome A-associated F-box pr...    89   5e-32
emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]    89   2e-31
ref|XP_002523077.1| Phytochrome A-associated F-box protein, puta...    85   4e-29
ref|XP_004173063.1| PREDICTED: phytochrome A-associated F-box pr...    88   8e-29
ref|XP_002302709.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-28

>ref|XP_002266159.1| PREDICTED: phytochrome A-associated F-box protein-like [Vitis
           vinifera]
          Length = 330

 Score = 89.4 bits (220), Expect(2) = 5e-32
 Identities = 40/58 (68%), Positives = 50/58 (86%), Gaps = 2/58 (3%)
 Frame = +1

Query: 232 APPGGWASLHKLAVCCPGLVRSGVLLEHSDFGLERELGPDQNYQSSNLYQ--VGQAQT 399
           +PPGGWA+LHKL+VCCPGL+ SGVLLE+SDFGLERELGPD++Y+ +  +Q  VG A T
Sbjct: 73  SPPGGWAALHKLSVCCPGLLHSGVLLENSDFGLERELGPDEDYRKAGSFQITVGDATT 130



 Score = 73.6 bits (179), Expect(2) = 5e-32
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +3

Query: 6   LEDDPTHWAILSCVCTKFSSLISSVCWKDKCYEKIPHVVSDLLSG 140
           LEDDP +WA L+CVCTKFSSLI +VCWK KC + IP +V+DL SG
Sbjct: 24  LEDDPRYWARLACVCTKFSSLIRNVCWKTKCSQTIPSIVADLFSG 68


>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score = 89.4 bits (220), Expect(2) = 2e-31
 Identities = 40/58 (68%), Positives = 50/58 (86%), Gaps = 2/58 (3%)
 Frame = +1

Query: 232 APPGGWASLHKLAVCCPGLVRSGVLLEHSDFGLERELGPDQNYQSSNLYQ--VGQAQT 399
           +PPGGWA+LHKL+VCCPGL+ SGVLLE+SDFGLERELGPD++Y+ +  +Q  VG A T
Sbjct: 463 SPPGGWAALHKLSVCCPGLLHSGVLLENSDFGLERELGPDEDYRKAGSFQITVGDATT 520



 Score = 71.6 bits (174), Expect(2) = 2e-31
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = +3

Query: 6   LEDDPTHWAILSCVCTKFSSLISSVCWKDKCYEKIPHVVSDLLSG 140
           LEDDP +WA L+CVCTKFSSLI +VCWK KC +  P +V+DL SG
Sbjct: 414 LEDDPRYWARLACVCTKFSSLIRNVCWKTKCSQTXPSIVADLFSG 458


>ref|XP_002523077.1| Phytochrome A-associated F-box protein, putative [Ricinus communis]
           gi|223537639|gb|EEF39262.1| Phytochrome A-associated
           F-box protein, putative [Ricinus communis]
          Length = 332

 Score = 84.7 bits (208), Expect(2) = 4e-29
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = +1

Query: 232 APPGGWASLHKLAVCCPGLVRSGVLLEHSDFGLERELGPDQNYQSSNLYQVGQAQ 396
           A PGGW+SLHKL+VCCPGL+ +G LLEHSDFGLERELGPD NY  +++ +   +Q
Sbjct: 70  AIPGGWSSLHKLSVCCPGLLHAGFLLEHSDFGLERELGPDDNYHKTSVSRTTSSQ 124



 Score = 68.6 bits (166), Expect(2) = 4e-29
 Identities = 30/49 (61%), Positives = 38/49 (77%)
 Frame = +3

Query: 6   LEDDPTHWAILSCVCTKFSSLISSVCWKDKCYEKIPHVVSDLLSGQRAA 152
           LEDDP +WA L+CVCTKF+SLI ++C+K KC+  IP VVSDLL+    A
Sbjct: 22  LEDDPRNWARLACVCTKFTSLIRNICFKAKCHRTIPSVVSDLLASSDGA 70


>ref|XP_004173063.1| PREDICTED: phytochrome A-associated F-box protein-like [Cucumis
           sativus]
          Length = 379

 Score = 88.2 bits (217), Expect(2) = 8e-29
 Identities = 40/55 (72%), Positives = 44/55 (80%)
 Frame = +1

Query: 235 PPGGWASLHKLAVCCPGLVRSGVLLEHSDFGLERELGPDQNYQSSNLYQVGQAQT 399
           P GGWASLHKLAVCCPGLV SGVLLE+SDFGLERELGPD+NY      Q  Q ++
Sbjct: 114 PAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPES 168



 Score = 63.9 bits (154), Expect(2) = 8e-29
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = +3

Query: 6   LEDDPTHWAILSCVCTKFSSLISSVCWKDKCYEKIPHVVSDLLSG 140
           LEDDP +WA L+CV TKFS  I ++CWK KC   IP +VSDLL G
Sbjct: 66  LEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLVG 110


>ref|XP_002302709.1| predicted protein [Populus trichocarpa] gi|222844435|gb|EEE81982.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 77.8 bits (190), Expect(2) = 2e-28
 Identities = 34/48 (70%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
 Frame = +1

Query: 229 DAP-PGGWASLHKLAVCCPGLVRSGVLLEHSDFGLERELGPDQNYQSS 369
           D+P PG W++LHKLAVCCPGL+ +GV LEHSDFGLERELGPD  +  S
Sbjct: 68  DSPFPGAWSALHKLAVCCPGLLHAGVFLEHSDFGLERELGPDDYFHKS 115



 Score = 73.2 bits (178), Expect(2) = 2e-28
 Identities = 32/44 (72%), Positives = 36/44 (81%)
 Frame = +3

Query: 6   LEDDPTHWAILSCVCTKFSSLISSVCWKDKCYEKIPHVVSDLLS 137
           LEDDP +WA L+CVCTKFSSLI  +CWK KC + IP VVSDLLS
Sbjct: 22  LEDDPRNWARLACVCTKFSSLIRDICWKSKCNKTIPSVVSDLLS 65