BLASTX nr result

ID: Bupleurum21_contig00004201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004201
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|2...   149   6e-34
ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...   148   1e-33
ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...   135   7e-30
gb|ACU18590.1| unknown [Glycine max]                                   82   2e-13
ref|XP_003547680.1| PREDICTED: F-box/kelch-repeat protein At3g06...    80   4e-13

>ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|222836749|gb|EEE75142.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  149 bits (376), Expect = 6e-34
 Identities = 79/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)
 Frame = -1

Query: 737 GDLAKAYDLESNKCYIYVDGCYYWFGSLEEYSC---EVIISFDMSNDSFKEIDVPDYAQP 567
           GDL++ Y L +NKCYI V+G +YW GS    +C   EV+I+FDM+ +  +EI +PDY + 
Sbjct: 239 GDLSRYYHLRNNKCYICVEGVFYWLGSYG--ACGDPEVVINFDMATNVCQEIQLPDYDKS 296

Query: 566 -SSKCLAVYDDYLVFLSLHDIEKNFDIWTWSDGCWTKKFTVGPLPDVRSPVGHWNGNKLL 390
            +S+ LAVY+D +  L +   E    +WT  + CWTKKF VGPL  V+ PVGHW  N ++
Sbjct: 297 INSESLAVYNDSIALLVVQ--ESVLHVWTLDERCWTKKFVVGPLLGVQYPVGHWQNNTII 354

Query: 389 LECEDCRLVLFDPDTQETKDLAFQ--EISCEGVFAYMESLVSIKNKTEAGQ 243
           L  +   L+L DP TQE   L F+   I CEG+FAY ESLV +KN  E  +
Sbjct: 355 LISDSYELLLCDPRTQEMSGLGFEGGTIRCEGIFAYKESLVPVKNGHEEAE 405


>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score =  148 bits (373), Expect = 1e-33
 Identities = 72/163 (44%), Positives = 105/163 (64%), Gaps = 4/163 (2%)
 Frame = -1

Query: 737 GDLAKAYDLESNKCYIYVDGCYYWFGSLEEYSC--EVIISFDMSNDSFKEIDVPDYAQPS 564
           GDL++ Y L++NKCYI ++G ++W GS E +    +VIISFDM+ ++ +EI +PD  +  
Sbjct: 237 GDLSRYYYLQNNKCYICMNGVFFWLGSYEIFGDPEKVIISFDMATETCQEIQLPDCGKSH 296

Query: 563 S-KCLAVYDDYLVFLSLHDIEKNFDIWTWSDGCWTKKFTVGPLPDVRSPVGHWNGNKLLL 387
           + +CLA Y D L  L +H  EK   +WT ++ CW K F++GPLP++  P+GHW  +KL+L
Sbjct: 297 NCQCLATYQDSLAILDVH--EKFLHMWTLNERCWVKNFSIGPLPEISYPIGHWKNSKLIL 354

Query: 386 ECEDCRLVLFDPDTQETKDLAFQE-ISCEGVFAYMESLVSIKN 261
             +   L+L DP TQE   L     + C GVFAY ESLV + N
Sbjct: 355 VSDSGELILCDPSTQEISGLGLTRWVRCVGVFAYKESLVLVNN 397


>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  135 bits (341), Expect = 7e-30
 Identities = 67/161 (41%), Positives = 100/161 (62%), Gaps = 2/161 (1%)
 Frame = -1

Query: 737 GDLAKAYDLESNKCYIYVDGCYYWFGSLEEYSCEVIISFDMSNDSFKEIDVPDYAQPS-S 561
           G L + Y L  N CY  VDG YYW          VI+SF+M+ D+F+EI  PDY +P+ S
Sbjct: 193 GSLDQGYTLLGNYCYTNVDGVYYWQAG-HGVHMNVILSFNMATDAFQEIQEPDYDKPAYS 251

Query: 560 KCLAVYDDYLVFLSLHDIEKNFDIWTWSDGCWTKKFTVGPLPDVRSPVGHWNGNKLLLEC 381
             L +Y D + F ++H++EK  DIW  ++GCW ++F   PL ++R+PV HW    ++L+ 
Sbjct: 252 TRLILYHDSIAFSTVHNVEKFLDIWVLNEGCWIRQFKSRPLLELRNPVAHWKNGNVILDS 311

Query: 380 EDCRLVLFDPDTQETKDLAFQEIS-CEGVFAYMESLVSIKN 261
           ++ +L+L+D + QE KDL F+    C  +  Y ESLVSIK+
Sbjct: 312 DNDQLMLYDTNKQELKDLRFKGTGVCYEILVYRESLVSIKD 352


>gb|ACU18590.1| unknown [Glycine max]
          Length = 405

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 14/166 (8%)
 Frame = -1

Query: 707 SNKCYIYVDGCYYWFGSLEEYSC--EVIISFDMSNDSFKEIDVPDYAQPSSKCLAVYDDY 534
           S++ + Y + C +W+G +E+     +++++FDM  +SF++I VP     S +  A    +
Sbjct: 217 SSRVFTYANNCCHWWGFVEDSGATQDIVLAFDMVKESFRKIRVPKVRDSSDEKFATLVPF 276

Query: 533 -------LVFLSLHDIEKNFDIWT----WSDGCWTKKFTVGPLPDVRSPVGHWNGNKLLL 387
                  ++   +   EK+FD+W     W +G W K+++VGP+      VG +  N+LL 
Sbjct: 277 EESASIGVLVYPVRGAEKSFDVWVMKDYWDEGSWVKQYSVGPVQVNHRIVGFYGTNRLLW 336

Query: 386 ECEDCRLVLFDPDTQETKDL-AFQEISCEGVFAYMESLVSIKNKTE 252
           +  + RLVL+  D+++T+DL  + +        Y ESLVS+    E
Sbjct: 337 KDSNERLVLY--DSEKTRDLQVYGKFDSIRAARYTESLVSLHRGNE 380


>ref|XP_003547680.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 405

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
 Frame = -1

Query: 707 SNKCYIYVDGCYYWFGSLEEYSC--EVIISFDMSNDSFKEIDVPDYAQPSSKCLAVYDDY 534
           S++ + Y + C +W+G +E+     +++++FDM  +SF++I VP     S +  A    +
Sbjct: 217 SSRVFTYANNCCHWWGFVEDSGATQDIVLAFDMVKESFRKIRVPKVRDSSDEKFATLVPF 276

Query: 533 -------LVFLSLHDIEKNFDIWT----WSDGCWTKKFTVGPLPDVRSPVGHWNGNKLLL 387
                  ++   +   EK+FD+W     W +G W K+++VGP+      VG +  N+ L 
Sbjct: 277 EESASIGVLVYPVRGAEKSFDVWVMKDYWDEGSWVKQYSVGPVQVNHRIVGFYGTNRFLW 336

Query: 386 ECEDCRLVLFDPDTQETKDL-AFQEISCEGVFAYMESLVSIKNKTE 252
           +  + RLVL+  D+++T+DL  + +        Y ESLVS+    E
Sbjct: 337 KDSNERLVLY--DSEKTRDLQVYGKFDSIRAARYTESLVSLHRGNE 380


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