BLASTX nr result

ID: Bupleurum21_contig00004162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004162
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC19402.1| 26S proteasome regulatory subunit S5A [Mesembryan...   150   2e-34
ref|XP_003629286.1| 26S proteasome non-ATPase regulatory subunit...   150   2e-34
ref|XP_003517168.1| PREDICTED: 26S proteasome non-ATPase regulat...   150   2e-34
ref|XP_002264558.1| PREDICTED: 26S proteasome non-ATPase regulat...   150   2e-34
ref|XP_002533858.1| 26S proteasome non-atpase regulatory subunit...   150   2e-34

>gb|AAC19402.1| 26S proteasome regulatory subunit S5A [Mesembryanthemum
           crystallinum]
          Length = 405

 Score =  150 bits (379), Expect = 2e-34
 Identities = 88/151 (58%), Positives = 96/151 (63%), Gaps = 4/151 (2%)
 Frame = +1

Query: 1   VKYDKKVLEMIGRKLKKNSVSLDVVNFGEEDDEKTEKLQALVAAVNNNDSSHIVHVPPGA 180
           VKYDKKVLE IGRKLKKNSV+LDVV+FGE++D K+EKL+ALVAAVNNND+SHIVHVP G 
Sbjct: 118 VKYDKKVLETIGRKLKKNSVALDVVDFGEDEDGKSEKLEALVAAVNNNDTSHIVHVPAGP 177

Query: 181 NALSDVLISTPIFT----XXXXXXXXXXXXXXXXXXXXXXXVDPNVDPELALALRVSMXX 348
           NALSDVLISTPIFT                           VDPN+DPELALALRVSM  
Sbjct: 178 NALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFDFGVDPNLDPELALALRVSMEE 237

Query: 349 XXXXXXXXXXXXXXXXXXXXKPGEQASSSQD 441
                               K GEQ SSSQD
Sbjct: 238 ERARQEAAAKRAAEEAGRQEKGGEQQSSSQD 268


>ref|XP_003629286.1| 26S proteasome non-ATPase regulatory subunit [Medicago truncatula]
           gi|355523308|gb|AET03762.1| 26S proteasome non-ATPase
           regulatory subunit [Medicago truncatula]
          Length = 389

 Score =  150 bits (379), Expect = 2e-34
 Identities = 85/151 (56%), Positives = 97/151 (64%), Gaps = 4/151 (2%)
 Frame = +1

Query: 1   VKYDKKVLEMIGRKLKKNSVSLDVVNFGEEDDEKTEKLQALVAAVNNNDSSHIVHVPPGA 180
           VK++KK+LEMIGRKLKKNSV+LD+VNFGEED+ KTEKL+AL+ AVNNNDSSH+VHVPPG 
Sbjct: 118 VKHEKKMLEMIGRKLKKNSVALDIVNFGEEDEGKTEKLEALLTAVNNNDSSHMVHVPPGP 177

Query: 181 NALSDVLISTPIFT----XXXXXXXXXXXXXXXXXXXXXXXVDPNVDPELALALRVSMXX 348
           NALSDVLISTPIFT                           VDPN+DPELALALRVSM  
Sbjct: 178 NALSDVLISTPIFTGDGEGGSGFAAAAAAASAGGVSGYDFGVDPNLDPELALALRVSMEE 237

Query: 349 XXXXXXXXXXXXXXXXXXXXKPGEQASSSQD 441
                               K GEQ ++SQD
Sbjct: 238 ERARQEAAAKKAAEDASKQEKGGEQQATSQD 268


>ref|XP_003517168.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 4-like
           [Glycine max]
          Length = 405

 Score =  150 bits (378), Expect = 2e-34
 Identities = 86/151 (56%), Positives = 97/151 (64%), Gaps = 4/151 (2%)
 Frame = +1

Query: 1   VKYDKKVLEMIGRKLKKNSVSLDVVNFGEEDDEKTEKLQALVAAVNNNDSSHIVHVPPGA 180
           VK++KK+LEMIGRKLKKNSV+LD+VNFGEED+ KTEKL+AL+AAVNNND+SHIVHVP G 
Sbjct: 118 VKHEKKMLEMIGRKLKKNSVALDIVNFGEEDEGKTEKLEALLAAVNNNDTSHIVHVPSGP 177

Query: 181 NALSDVLISTPIFT----XXXXXXXXXXXXXXXXXXXXXXXVDPNVDPELALALRVSMXX 348
           NALSDVLISTPIFT                           VDPN+DPELALALRVSM  
Sbjct: 178 NALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEE 237

Query: 349 XXXXXXXXXXXXXXXXXXXXKPGEQASSSQD 441
                               K GEQ +SSQD
Sbjct: 238 ERARQEAAAKKAAEDAAKQEKGGEQQASSQD 268


>ref|XP_002264558.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 [Vitis
           vinifera] gi|297734994|emb|CBI17356.3| unnamed protein
           product [Vitis vinifera]
          Length = 404

 Score =  150 bits (378), Expect = 2e-34
 Identities = 86/151 (56%), Positives = 95/151 (62%), Gaps = 4/151 (2%)
 Frame = +1

Query: 1   VKYDKKVLEMIGRKLKKNSVSLDVVNFGEEDDEKTEKLQALVAAVNNNDSSHIVHVPPGA 180
           VKYDKKVLEMIGRKLKKNSV++D+V+FGE+DD K EKL+AL+ +VNNNDSSHIVHVP G 
Sbjct: 118 VKYDKKVLEMIGRKLKKNSVAIDIVDFGEDDDGKPEKLEALLGSVNNNDSSHIVHVPAGP 177

Query: 181 NALSDVLISTPIFT----XXXXXXXXXXXXXXXXXXXXXXXVDPNVDPELALALRVSMXX 348
           NALSDVLISTPIFT                           VDPN+DPELALALRVSM  
Sbjct: 178 NALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVAGFDFGVDPNLDPELALALRVSMEE 237

Query: 349 XXXXXXXXXXXXXXXXXXXXKPGEQASSSQD 441
                               K GEQ SSSQD
Sbjct: 238 ERARQEAAAKKAAEEASRQEKEGEQQSSSQD 268


>ref|XP_002533858.1| 26S proteasome non-atpase regulatory subunit, putative [Ricinus
           communis] gi|223526195|gb|EEF28522.1| 26S proteasome
           non-atpase regulatory subunit, putative [Ricinus
           communis]
          Length = 402

 Score =  150 bits (378), Expect = 2e-34
 Identities = 83/149 (55%), Positives = 96/149 (64%), Gaps = 2/149 (1%)
 Frame = +1

Query: 1   VKYDKKVLEMIGRKLKKNSVSLDVVNFGEEDDEKTEKLQALVAAVNNNDSSHIVHVPPGA 180
           VKYDKK+LEMIG+KLKKN+VSLD+VNFGEE+DEK EKL+ALV+AVNNNDSSHIVH+PPG 
Sbjct: 118 VKYDKKMLEMIGKKLKKNNVSLDIVNFGEEEDEKPEKLEALVSAVNNNDSSHIVHIPPGP 177

Query: 181 NALSDVLISTPIFT--XXXXXXXXXXXXXXXXXXXXXXXVDPNVDPELALALRVSMXXXX 354
           NA+SDVLISTP+F                          VDPN+DPELALALRVSM    
Sbjct: 178 NAISDVLISTPVFNGDGGGSGFAAAAAAAAAGGGEFDFGVDPNLDPELALALRVSMEEER 237

Query: 355 XXXXXXXXXXXXXXXXXXKPGEQASSSQD 441
                             K  E +S+SQD
Sbjct: 238 ARQEAAAKRAAEESSTQGKVDEPSSTSQD 266


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