BLASTX nr result

ID: Bupleurum21_contig00004148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004148
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ02348.1| 60s ribosome protein L19 [Vernicia fordii]             193   1e-47
gb|ADV56679.1| 60S ribosomal protein [Phaseolus vulgaris] gi|319...   192   3e-47
ref|XP_002523128.1| 60S ribosomal protein L19, putative [Ricinus...   192   3e-47
ref|XP_002305919.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-47
ref|XP_002516973.1| 60S ribosomal protein L19, putative [Ricinus...   191   4e-47

>gb|ACJ02348.1| 60s ribosome protein L19 [Vernicia fordii]
          Length = 206

 Score =  193 bits (490), Expect = 1e-47
 Identities = 95/97 (97%), Positives = 96/97 (98%)
 Frame = +3

Query: 3   MVSLKLQKRLASSVLKCGKGKVWLDPNESNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 182
           MVSLKLQKRLASSVLKCGKGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 183 SRARRMKEAKRKGRHAGYGKRKGTREARLPTKVLWMR 293
           SRARRMKEAKRKGRHAGYGKRKGTREARLPTK+LWMR
Sbjct: 61  SRARRMKEAKRKGRHAGYGKRKGTREARLPTKILWMR 97


>gb|ADV56679.1| 60S ribosomal protein [Phaseolus vulgaris]
           gi|319428672|gb|ADV56695.1| 60S ribosomal protein
           [Phaseolus vulgaris]
          Length = 209

 Score =  192 bits (487), Expect = 3e-47
 Identities = 93/97 (95%), Positives = 97/97 (100%)
 Frame = +3

Query: 3   MVSLKLQKRLASSVLKCGKGKVWLDPNESNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 182
           MVSLKLQKRLA+SVLKCG+GKVWLDPNESNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNESNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 183 SRARRMKEAKRKGRHAGYGKRKGTREARLPTKVLWMR 293
           SRARRMKEAKRKGRH+GYGKRKGTREARLPTK+LWMR
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMR 97


>ref|XP_002523128.1| 60S ribosomal protein L19, putative [Ricinus communis]
           gi|223537690|gb|EEF39313.1| 60S ribosomal protein L19,
           putative [Ricinus communis]
          Length = 208

 Score =  192 bits (487), Expect = 3e-47
 Identities = 93/97 (95%), Positives = 97/97 (100%)
 Frame = +3

Query: 3   MVSLKLQKRLASSVLKCGKGKVWLDPNESNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 182
           MVSLKLQKRLA+SVLKCGKGKVWLDPNE+NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEANEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 183 SRARRMKEAKRKGRHAGYGKRKGTREARLPTKVLWMR 293
           SRARRMKEAKRKGRH+GYGKRKGTREARLPTK+LWMR
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMR 97


>ref|XP_002305919.1| predicted protein [Populus trichocarpa] gi|222848883|gb|EEE86430.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  192 bits (487), Expect = 3e-47
 Identities = 94/97 (96%), Positives = 96/97 (98%)
 Frame = +3

Query: 3   MVSLKLQKRLASSVLKCGKGKVWLDPNESNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 182
           MVSLKLQKRLA+SVLKCGKGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 183 SRARRMKEAKRKGRHAGYGKRKGTREARLPTKVLWMR 293
           SRARRMKEAKRKGRH+GYGKRKGTREARLPTKVLWMR
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMR 97


>ref|XP_002516973.1| 60S ribosomal protein L19, putative [Ricinus communis]
           gi|223544061|gb|EEF45587.1| 60S ribosomal protein L19,
           putative [Ricinus communis]
          Length = 206

 Score =  191 bits (486), Expect = 4e-47
 Identities = 93/97 (95%), Positives = 96/97 (98%)
 Frame = +3

Query: 3   MVSLKLQKRLASSVLKCGKGKVWLDPNESNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 182
           MVSLKLQKRLA+SVLKCGKGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 183 SRARRMKEAKRKGRHAGYGKRKGTREARLPTKVLWMR 293
           SRARRMKEAKRKGRH+GYGKRKGTREARLPTK+LWMR
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMR 97


Top