BLASTX nr result

ID: Bupleurum21_contig00004142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004142
         (1747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22113.3| unnamed protein product [Vitis vinifera]              548   e-153
ref|XP_002279618.2| PREDICTED: cyclin-L1-1 [Vitis vinifera]           543   e-152
ref|XP_004135616.1| PREDICTED: cyclin-L1-1-like [Cucumis sativus...   543   e-152
ref|XP_002529710.1| Cyclin-L2, putative [Ricinus communis] gi|22...   530   e-148
ref|XP_002312033.1| predicted protein [Populus trichocarpa] gi|2...   529   e-148

>emb|CBI22113.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  548 bits (1412), Expect = e-153
 Identities = 273/365 (74%), Positives = 311/365 (85%), Gaps = 4/365 (1%)
 Frame = -2

Query: 1557 MIYTAIDTFYLTDEELKNSPSRKDGIDEATEVNLRIYGCDLIQESGILLKLPQAVMASGQ 1378
            MIYTAIDTFYLTDE+LKNSPSRKDGIDEATE+ LRIYGCDLIQESGILL+LPQ VMA+GQ
Sbjct: 1    MIYTAIDTFYLTDEQLKNSPSRKDGIDEATEMTLRIYGCDLIQESGILLRLPQVVMATGQ 60

Query: 1377 VLFHRFYCKKSFAKFNVKRLAASCVWVASKLEENPRKARHVINVFHRMECRRENLPIEHL 1198
            VLFHRFYCKKSFA+FNVKR+AASCVW+ASKLEE+ RKAR V+ VFHRMECRRENLP+ HL
Sbjct: 61   VLFHRFYCKKSFARFNVKRVAASCVWLASKLEESLRKARQVLIVFHRMECRRENLPVVHL 120

Query: 1197 DSFSKKYAELKLDLIRTERHLLKEMGFVCHVEHPHKFISNYLATLETPPELRQEAWNLAN 1018
            D FSKKYAELK  L RTERH+LKEMGF+CHVEHPHKFISNYLATL+TPPELRQEAWNLAN
Sbjct: 121  DPFSKKYAELKTHLSRTERHILKEMGFICHVEHPHKFISNYLATLKTPPELRQEAWNLAN 180

Query: 1017 DSLRTTLCVQFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSGIDEVCRVLAHLY 838
            DSLRTTLCV+FKSEVVACGVVYAAARRFQVPLPEN PWW+ FDA+KS IDEVCRVLAHLY
Sbjct: 181  DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENEPWWEVFDAEKSAIDEVCRVLAHLY 240

Query: 837  SLPKAQYIPVCKEGGSFTTTSRSWDPPAQPLSKEGSLSGAPTKDD---PKAVTT-VSIDF 670
            +LPKAQYIPVCK+G SFT++++S D   QP+SKE   SG    +D   PKA +  ++ + 
Sbjct: 241  NLPKAQYIPVCKDGDSFTSSNKSQDSQTQPVSKEVLQSGPSANNDTVTPKAASALINPES 300

Query: 669  GGSKESLGKAAVGKSKESKKNDDDISQTMPTVEGEAKEEQLPRKSRSEHKMEAGGERIKD 490
            GGSK S+ K A+   KESKK DDD       VEGE +EE +P  S+SEH+ EA GER K+
Sbjct: 301  GGSKNSMVKQALDMLKESKKGDDDPKSM--AVEGEGREEPIP--SKSEHRTEASGERNKE 356

Query: 489  RERDR 475
            R+++R
Sbjct: 357  RDKER 361


>ref|XP_002279618.2| PREDICTED: cyclin-L1-1 [Vitis vinifera]
          Length = 451

 Score =  543 bits (1399), Expect = e-152
 Identities = 282/424 (66%), Positives = 318/424 (75%), Gaps = 17/424 (4%)
 Frame = -2

Query: 1557 MIYTAIDTFYLTDEELKNSPSRKDGIDEATEVNLRIYGCDLIQESGILLKLPQAVMASGQ 1378
            MIYTAIDTFYLTDE+LKNSPSRKDGIDEATE+ LRIYGCDLIQESGILL+LPQ VMA+GQ
Sbjct: 1    MIYTAIDTFYLTDEQLKNSPSRKDGIDEATEMTLRIYGCDLIQESGILLRLPQVVMATGQ 60

Query: 1377 VLFHRFYCKKSFAKFNVKRLAASCVWVASKLEENPRKARHVINVFHRMECRRENLPIEHL 1198
            VLFHRFYCKKSFA+FNVKR+AASCVW+ASKLEE+ RKAR V+ VFHRMECRRENLP+ HL
Sbjct: 61   VLFHRFYCKKSFARFNVKRVAASCVWLASKLEESLRKARQVLIVFHRMECRRENLPVVHL 120

Query: 1197 DSFSKKYAELKLDLIRTERHLLKEMGFVCHVEHPHKFISNYLATLETPPELRQEAWNLAN 1018
            D FSKKYAELK  L RTERH+LKEMGF+CHVEHPHKFISNYLATL+TPPELRQEAWNLAN
Sbjct: 121  DPFSKKYAELKTHLSRTERHILKEMGFICHVEHPHKFISNYLATLKTPPELRQEAWNLAN 180

Query: 1017 DSLRTTLCVQFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSGIDEVCRVLAHLY 838
            DSLRTTLCV+FKSEVVACGVVYAAARRFQVPLPEN PWW+ FDA+KS IDEVCRVLAHLY
Sbjct: 181  DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENEPWWEVFDAEKSAIDEVCRVLAHLY 240

Query: 837  SLPKAQYIPVCKEGGSFTTTSRSWDPPAQPLSKEGSLSGAPTKDDPKAVTT-VSIDFGGS 661
            +LPKAQYIPVCK+G SFT++++S D   QP   +   S       PKA +  ++ + GGS
Sbjct: 241  NLPKAQYIPVCKDGDSFTSSNKSQDSQTQPEVLQSGPSANNDTVTPKAASALINPESGGS 300

Query: 660  KESLGKAAVGKSKESKKNDDDISQTMPTVEGEAKEEQLPRKSRSEHKMEAGGERIK---- 493
            K S+ K A+   KESKK DDD       VEGE +EE +P  S+SEH+ EA GER K    
Sbjct: 301  KNSMVKQALDMLKESKKGDDDPKSM--AVEGEGREEPIP--SKSEHRTEASGERNKERDK 356

Query: 492  ------------DRERDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTHRYKDKGRGS 349
                        DRER+R                              R HR KDKG+ S
Sbjct: 357  ERERERERDRDRDRERERAKARDRDRGRDSDRERERDEIDKDREKVKDRKHRSKDKGKDS 416

Query: 348  GHSD 337
            GHS+
Sbjct: 417  GHSE 420


>ref|XP_004135616.1| PREDICTED: cyclin-L1-1-like [Cucumis sativus]
            gi|449485709|ref|XP_004157252.1| PREDICTED:
            cyclin-L1-1-like [Cucumis sativus]
          Length = 443

 Score =  543 bits (1398), Expect = e-152
 Identities = 269/364 (73%), Positives = 309/364 (84%), Gaps = 3/364 (0%)
 Frame = -2

Query: 1557 MIYTAIDTFYLTDEELKNSPSRKDGIDEATEVNLRIYGCDLIQESGILLKLPQAVMASGQ 1378
            MIYTAIDTFYLTDE+LKNSPSRKDGIDE TE  LRIYGCDLIQE+GILLKLPQAVMA+GQ
Sbjct: 1    MIYTAIDTFYLTDEQLKNSPSRKDGIDETTETTLRIYGCDLIQEAGILLKLPQAVMATGQ 60

Query: 1377 VLFHRFYCKKSFAKFNVKRLAASCVWVASKLEENPRKARHVINVFHRMECRRENLPIEHL 1198
            VLFHRFYCKKSFA+FNVK++A+SCVW+ASKLEENPRKAR VI VFHRMECRRENL IE L
Sbjct: 61   VLFHRFYCKKSFARFNVKKVASSCVWLASKLEENPRKARQVIIVFHRMECRRENLSIEFL 120

Query: 1197 DSFSKKYAELKLDLIRTERHLLKEMGFVCHVEHPHKFISNYLATLETPPELRQEAWNLAN 1018
            D   KKYA+LK++L RTERH+LKEMGF+CHVEHPHKFISNYLATL TPPELRQEAWNLAN
Sbjct: 121  DPSLKKYADLKIELSRTERHILKEMGFICHVEHPHKFISNYLATLGTPPELRQEAWNLAN 180

Query: 1017 DSLRTTLCVQFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSGIDEVCRVLAHLY 838
            DSLRTTLCV+FKSEVVACGVVYAAARRFQVPLPENPPWWKAFD +KSGIDEVCRVLAHLY
Sbjct: 181  DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDGEKSGIDEVCRVLAHLY 240

Query: 837  SLPKAQYIPVCKEGGSFTTTSRSWDPPAQPLSKEGSLSGAPTKDDP---KAVTTVSIDFG 667
            +LPKAQYIPVCK+G SFT +++SWD  + P++KE   S     DDP   KA +  +++ G
Sbjct: 241  TLPKAQYIPVCKDGDSFTFSNKSWDSQSLPVAKEVPQSSPTANDDPSIVKATSGTNLESG 300

Query: 666  GSKESLGKAAVGKSKESKKNDDDISQTMPTVEGEAKEEQLPRKSRSEHKMEAGGERIKDR 487
             SK+ + K A+ K KESKK+DD+    MP  E   +EE +PR S+S+ + +  GER K+R
Sbjct: 301  VSKDEMLKLALNKLKESKKSDDESKSLMP--EATTREELVPR-SKSDRRADI-GERNKER 356

Query: 486  ERDR 475
            ER+R
Sbjct: 357  ERER 360


>ref|XP_002529710.1| Cyclin-L2, putative [Ricinus communis] gi|223530812|gb|EEF32676.1|
            Cyclin-L2, putative [Ricinus communis]
          Length = 446

 Score =  530 bits (1364), Expect = e-148
 Identities = 270/364 (74%), Positives = 309/364 (84%), Gaps = 3/364 (0%)
 Frame = -2

Query: 1557 MIYTAIDTFYLTDEELKNSPSRKDGIDEATEVNLRIYGCDLIQESGILLKLPQAVMASGQ 1378
            MIYTAID FYLTDE+L+NSPS+KDGIDEATE  LRIYGCDLIQESGILLKLPQAVMA+GQ
Sbjct: 1    MIYTAIDNFYLTDEQLQNSPSKKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQ 60

Query: 1377 VLFHRFYCKKSFAKFNVKRLAASCVWVASKLEENPRKARHVINVFHRMECRRENLPIEHL 1198
            VLFHRFYCKKSF +FNVK++AASCVW+ASKLEENPRK+R VI VFHRMECRRENLPIE L
Sbjct: 61   VLFHRFYCKKSFGRFNVKKVAASCVWLASKLEENPRKSRQVIIVFHRMECRRENLPIEFL 120

Query: 1197 DSFSKKYAELKLDLIRTERHLLKEMGFVCHVEHPHKFISNYLATLETPPELRQEAWNLAN 1018
            D  SKK+AELK++L RTERH+LKEMGFVCHVEHPHKFISNYL TL+TPPELRQEAWNLAN
Sbjct: 121  DLNSKKFAELKVELSRTERHILKEMGFVCHVEHPHKFISNYLVTLKTPPELRQEAWNLAN 180

Query: 1017 DSLRTTLCVQFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSGIDEVCRVLAHLY 838
            DSLRTTLCV+FKSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSGIDEVCRVLAHLY
Sbjct: 181  DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSGIDEVCRVLAHLY 240

Query: 837  SLPKAQYIPVCKEGGSFTTTSRSWDPPAQPLSKEGSLSGAPTKD--DPKAVTT-VSIDFG 667
            SLPKA+YI VCK+ G F+ +S+S D  A P  KE S + +P  D   PKA    VS + G
Sbjct: 241  SLPKAKYISVCKD-GDFSFSSKSSDSQATP--KEVSQASSPANDATAPKAAPAGVSAESG 297

Query: 666  GSKESLGKAAVGKSKESKKNDDDISQTMPTVEGEAKEEQLPRKSRSEHKMEAGGERIKDR 487
            GS+  + K A+ K K+SKK++D+       V+GEA++E +PR S+SEH+ E+  ER K+R
Sbjct: 298  GSRGPIVKPALDKLKDSKKSNDE----SKAVDGEARDEPIPR-SKSEHRAESSVERSKER 352

Query: 486  ERDR 475
            +R R
Sbjct: 353  DRGR 356


>ref|XP_002312033.1| predicted protein [Populus trichocarpa] gi|222851853|gb|EEE89400.1|
            predicted protein [Populus trichocarpa]
          Length = 421

 Score =  529 bits (1363), Expect = e-148
 Identities = 269/366 (73%), Positives = 310/366 (84%), Gaps = 5/366 (1%)
 Frame = -2

Query: 1557 MIYTAIDTFYLTDEELKNSPSRKDGIDEATEVNLRIYGCDLIQESGILLKLPQAVMASGQ 1378
            MIYTAID FYLTD+EL+NSPSRKDGIDEATE  LRIYGCDLIQESGILLKLPQAVMA+GQ
Sbjct: 1    MIYTAIDNFYLTDDELQNSPSRKDGIDEATETTLRIYGCDLIQESGILLKLPQAVMATGQ 60

Query: 1377 VLFHRFYCKKSFAKFNVKRLAASCVWVASKLEENPRKARHVINVFHRMECRRENLPIEHL 1198
            VLFHRFYCKKSFA+FNVK++AASCVW+ASKLEE+PRK+R VI VFHRMECRRENLP+E L
Sbjct: 61   VLFHRFYCKKSFARFNVKKVAASCVWLASKLEESPRKSRQVIIVFHRMECRRENLPLEFL 120

Query: 1197 DSFSKKYAELKLDLIRTERHLLKEMGFVCHVEHPHKFISNYLATLETPPELRQEAWNLAN 1018
            D  SKK+AELK++L +TERH+LKEMGFVCHVEHPHKFISNYL TL TP ELRQEAWNLAN
Sbjct: 121  DLNSKKFAELKIELSKTERHILKEMGFVCHVEHPHKFISNYLMTLGTPQELRQEAWNLAN 180

Query: 1017 DSLRTTLCVQFKSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSGIDEVCRVLAHLY 838
            DSLRTTLCV+FKS VVACGVVYAAARRFQVPLPENPPWWKAFDA+KSGIDEVCRVLAHLY
Sbjct: 181  DSLRTTLCVRFKSAVVACGVVYAAARRFQVPLPENPPWWKAFDAEKSGIDEVCRVLAHLY 240

Query: 837  SLPKAQYIPVCKEGGSFTTTSRSWDPPAQPLSKE----GSLSGAPTKDDPKAVTT-VSID 673
            SLPKAQY+ VCK+ G F+ +++S D   Q +SKE     SL       +PKA  + V+++
Sbjct: 241  SLPKAQYVSVCKD-GDFSFSNKSSDSQLQLISKEIPRTTSLPANNDSTEPKAAPSGVNVE 299

Query: 672  FGGSKESLGKAAVGKSKESKKNDDDISQTMPTVEGEAKEEQLPRKSRSEHKMEAGGERIK 493
             GGSK+ + K A+ K KESKK DD+        EGEA+EE +PR S+SEH+ EAGG++ K
Sbjct: 300  SGGSKD-ITKVALDKLKESKKTDDE----SKPAEGEAREELIPR-SKSEHRTEAGGDKSK 353

Query: 492  DRERDR 475
            +R+RDR
Sbjct: 354  ERDRDR 359


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