BLASTX nr result
ID: Bupleurum21_contig00004141
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00004141
(1874 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283895.2| PREDICTED: F-box/LRR-repeat protein At5g6352... 440 e-121
emb|CAN79767.1| hypothetical protein VITISV_019403 [Vitis vinifera] 438 e-120
ref|XP_003523154.1| PREDICTED: F-box/LRR-repeat protein At5g6352... 428 e-117
ref|XP_003526949.1| PREDICTED: F-box/LRR-repeat protein At5g6352... 426 e-116
ref|XP_002322271.1| f-box family protein [Populus trichocarpa] g... 416 e-114
>ref|XP_002283895.2| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Vitis vinifera]
gi|297734433|emb|CBI15680.3| unnamed protein product
[Vitis vinifera]
Length = 527
Score = 440 bits (1131), Expect = e-121
Identities = 247/537 (45%), Positives = 333/537 (62%), Gaps = 7/537 (1%)
Frame = -1
Query: 1763 IGEDLLRNVVGRLRAVDFASSACVSRSWNRLCNSILSIPKFSSALSLNPSIEVAVDEVFS 1584
+ EDLL+N++ RL A+ FA++ CVSRSW R +LS PK +SA+SLNPS + AV EV
Sbjct: 12 LSEDLLQNILSRLPALSFANAGCVSRSWRRAAGDVLSRPKLASAISLNPSFQDAVKEVLD 71
Query: 1583 KVFGEPIRPHFAIVSIGSSFGLHEARSLVTAKLGYNIPIICTTPFGLMGKDVATDTFKXX 1404
V PIRPHFAI IG F L L+T KLG P+I + G++G D T+ FK
Sbjct: 72 SVLSRPIRPHFAIACIGLKFSLERTHKLITKKLGSATPVITSVARGIIGSDAITEEFKE- 130
Query: 1403 XXXXXXXXXDVSHGSLFEQLLYEDPNSMFRKKTPKNPAVLLTVGFLPGLKIAAVTLQRT- 1227
V G E F K+ ++L VGF+PGLK+ A+ L R
Sbjct: 131 ----------VKWGVDVED---------FNLPANKDRGIVLIVGFMPGLKVDAIPLLREL 171
Query: 1226 DKVG-PLVDEFVTDIRECSAIHSGQTSPLAIMLFADIKTDTDRLLEKLDYAMSPETVIVG 1050
++ G L+D+FV DIR SA SG TSP I++F D D +LEK+DYAMS ETVI+G
Sbjct: 172 EEPGISLIDKFVMDIRNFSAAVSGCTSPTGIVMFGDKHADMKPVLEKMDYAMSMETVILG 231
Query: 1049 DGSGVLLCGGNCQQENHRQKNFRSNHHSGVALLFMCDRDKPHGIGTIRFDVALSTGMSPV 870
+ SG + N N GVAL+F D DKP G+G +F VALSTG+ PV
Sbjct: 232 EESGHFMYRSGDDSRNI--SGSLKNSCDGVALVFARDNDKPQGVGETQFHVALSTGVVPV 289
Query: 869 GPKYNAVSVREKS--GEGTTWLTAKREGLKERLDGQTILNQIYEEMPDRVQYPAFYLGIV 696
GP + A SV+ K E +TWLTA++EGLKE LDG+ +L+ IY+EM + Y+G+
Sbjct: 290 GPTHKAASVKVKGDGSERSTWLTARKEGLKEALDGERLLHDIYDEMENENASHDLYIGVT 349
Query: 695 KRRKCLVGSDEVRWITSQVFHQVDGGDEEYLYVEGSGIRTGDFFRVFQTDSNLALSTLRT 516
KRRKC +GS++VRW+T+ FH V GGDEEYL+V+G GI+TGD FR +++DS+ ALS+ R
Sbjct: 350 KRRKCSIGSEKVRWVTTLEFHDVLGGDEEYLFVDGVGIKTGDPFRFYRSDSDTALSSCRH 409
Query: 515 VRDKFRSLKQNNGAGSSNMTIRPTQGANNT-IFGGFVFTCSGRGEHFFGKPNVDSAPFLE 339
V ++FR+LKQ +S G + T + GG +F+C GRG+ FFG+ NVDS+PFLE
Sbjct: 410 VSEEFRNLKQAWTHKNSYHFRGVADGGDKTEVCGGIIFSCYGRGDSFFGQANVDSSPFLE 469
Query: 338 NFPGVTLAGLFCGGEICRGDSSSYDQE--SQQGSYRCSVHSFSSVYLIMSYTPTTPE 174
NFPG LAG+ CGGEI R SS D + ++ S R +H +S+VYL++S+TP++ E
Sbjct: 470 NFPGFPLAGIMCGGEIGRVHLSSADHQGGQEESSPRSYLHYYSTVYLVISHTPSSLE 526
>emb|CAN79767.1| hypothetical protein VITISV_019403 [Vitis vinifera]
Length = 527
Score = 438 bits (1127), Expect = e-120
Identities = 247/537 (45%), Positives = 332/537 (61%), Gaps = 7/537 (1%)
Frame = -1
Query: 1763 IGEDLLRNVVGRLRAVDFASSACVSRSWNRLCNSILSIPKFSSALSLNPSIEVAVDEVFS 1584
+ EDLL+N++ RL A+ FA++ CVSRSW R +LS PK +SA+SLNPS + AV EV
Sbjct: 12 LSEDLLQNILSRLPALSFANAGCVSRSWRRAAGDVLSRPKLASAISLNPSFQDAVKEVLD 71
Query: 1583 KVFGEPIRPHFAIVSIGSSFGLHEARSLVTAKLGYNIPIICTTPFGLMGKDVATDTFKXX 1404
V PIRPHFAI IG F L L+T KLG P+I + G++G D T+ FK
Sbjct: 72 SVLSRPIRPHFAIACIGLKFSLERTHKLITKKLGSATPVITSVARGIIGSDAITEEFKE- 130
Query: 1403 XXXXXXXXXDVSHGSLFEQLLYEDPNSMFRKKTPKNPAVLLTVGFLPGLKIAAVTLQRT- 1227
V G E F K+ ++L VGF+PGLK+ A+ L R
Sbjct: 131 ----------VKWGVDVED---------FNLPANKDRGIVLIVGFMPGLKVDAIPLLREL 171
Query: 1226 DKVG-PLVDEFVTDIRECSAIHSGQTSPLAIMLFADIKTDTDRLLEKLDYAMSPETVIVG 1050
++ G L+D+FV DIR SA SG TSP I++F D D +LEK+DYAMS ETVI+G
Sbjct: 172 EEPGISLIDKFVMDIRNFSAAVSGCTSPTGIVMFGDKHADMKPVLEKMDYAMSMETVILG 231
Query: 1049 DGSGVLLCGGNCQQENHRQKNFRSNHHSGVALLFMCDRDKPHGIGTIRFDVALSTGMSPV 870
+ SG + N N GVAL+F D DKP G+G +F VALSTG+ PV
Sbjct: 232 EESGHFMYRSGDDSRNI--SGSLKNSCDGVALVFARDNDKPQGVGESQFHVALSTGVVPV 289
Query: 869 GPKYNAVSVREKS--GEGTTWLTAKREGLKERLDGQTILNQIYEEMPDRVQYPAFYLGIV 696
GP A SV+ K E +TWLTA++EGLKE LDG+ +L+ IY+EM + Y+G+
Sbjct: 290 GPTLKAASVKVKGDGSERSTWLTARKEGLKEALDGERLLHDIYDEMENENASHDLYIGVT 349
Query: 695 KRRKCLVGSDEVRWITSQVFHQVDGGDEEYLYVEGSGIRTGDFFRVFQTDSNLALSTLRT 516
KRRKC +GS++VRW+T+ FH V GGDEEYL+V+G GI+TGD FR +++DS+ ALS+ R
Sbjct: 350 KRRKCSIGSEKVRWVTTLEFHDVLGGDEEYLFVDGVGIKTGDPFRFYRSDSDTALSSCRH 409
Query: 515 VRDKFRSLKQNNGAGSSNMTIRPTQGANNT-IFGGFVFTCSGRGEHFFGKPNVDSAPFLE 339
V ++FR+LKQ +S G + T + GG +F+C GRG+ FFG+ NVDS+PFLE
Sbjct: 410 VSEEFRNLKQAWTHKNSYHFRGVADGGDKTEVCGGIIFSCYGRGDSFFGQANVDSSPFLE 469
Query: 338 NFPGVTLAGLFCGGEICRGDSSSYDQE--SQQGSYRCSVHSFSSVYLIMSYTPTTPE 174
NFPG LAG+ CGGEI R SS D + ++ S R +H +S+VYL++S+TP++ E
Sbjct: 470 NFPGFPLAGIMCGGEIGRVHLSSADHQGGQEESSPRSYLHYYSTVYLVISHTPSSLE 526
>ref|XP_003523154.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Glycine max]
Length = 538
Score = 428 bits (1101), Expect = e-117
Identities = 243/539 (45%), Positives = 332/539 (61%), Gaps = 6/539 (1%)
Frame = -1
Query: 1772 IDCIGEDLLRNVVGRLRAVDFASSACVSRSWNRLCNSILSIPKFSSALSLNPSIEVAVDE 1593
+ + EDLL+N++ RL A+ FAS+ACVS+SWN LCN IL+ PK SSA+SLNPS+ AV+E
Sbjct: 28 LSMLNEDLLQNILARLPALHFASAACVSKSWNSLCNRILTRPKLSSAISLNPSLPDAVNE 87
Query: 1592 VFSKVFGEPIRPHFAIVSIGSSFGLHEARSLVTAKLGYNIPIICTTPFGLMGKDVATDTF 1413
V KV EPIRPHFAI +IG+ F + L+ LG NIP+I T G+MG+D TD F
Sbjct: 88 VVHKVLSEPIRPHFAIANIGTGFSTAKTLCLIRQSLGSNIPVIVTVASGIMGRDAVTDEF 147
Query: 1412 KXXXXXXXXXXXDVSHGSLFEQLLYEDPNSMFRKKTPKNPAVLLTVGFLPGLKIAAVTLQ 1233
K V G+LF E N ++LTVG+LPGLK+ AV L+
Sbjct: 148 KE-----------VKWGALFSGFGEESYTRFI------NEGLVLTVGYLPGLKVEAVPLR 190
Query: 1232 RTDKVGPL-VDEFVTDIRECSAIHSGQTSPLAIMLFADIKTDTDRLLEKLDYAMSPETVI 1056
R K + VD F+ DI+E SA S P+ I+LF + +D +LEKLD+AM +TVI
Sbjct: 191 RPTKTQAIWVDNFIKDIKEYSASVSSSPFPVGIILFGEASSDMKLVLEKLDHAMPMDTVI 250
Query: 1055 VGDGSG----VLLCGGNCQQENHRQKNFRSNHHSGVALLFMCDRDKPHGIGTIRFDVALS 888
VGD G V G + + ++ N + VAL+F DR++ +GTIRF VALS
Sbjct: 251 VGDERGSFDFVHKSGNDSRIICSKKGNIEA-----VALVFARDRNR--SLGTIRFHVALS 303
Query: 887 TGMSPVGPKYNAVSVREKSGEGTTWLTAKREGLKERLDGQTILNQIYEEMPDRVQYPAFY 708
G+S VGP+Y A SV+ + + +TWLTA+REG +E LDGQ+IL I + + V+ P +
Sbjct: 304 NGVSTVGPRYKAASVKSNNADCSTWLTARREGQQENLDGQSILLDINNLLDNHVESPDLH 363
Query: 707 LGIVKRRKCLVGSDEVRWITSQVFHQVDGGDEEYLYVEGSGIRTGDFFRVFQTDSNLALS 528
+G++K RK G+++ T +H V GGDEEYLYV+G GI+TGDFF+ + +D N+AL+
Sbjct: 364 IGVIKHRKLSTGAEKPMPRTCISYHGVVGGDEEYLYVDGIGIKTGDFFQFYYSDPNIALA 423
Query: 527 TLRTVRDKFRSLKQNNGAGSSNMTIRPTQGANNT-IFGGFVFTCSGRGEHFFGKPNVDSA 351
+L V D +S+K + SS G N T +FGG +F C RGE FFG+ NVDS+
Sbjct: 424 SLTKVHDALKSIKLEKKSKSSK-----GDGDNATNVFGGIIFACYSRGESFFGRQNVDSS 478
Query: 350 PFLENFPGVTLAGLFCGGEICRGDSSSYDQESQQGSYRCSVHSFSSVYLIMSYTPTTPE 174
PFLENFPGV ++G+FCGGE+ R ++ Q C +H +S+VYL MSYTP + E
Sbjct: 479 PFLENFPGVPVSGIFCGGEMVRPCTTVIGQCEGASPISCCLHVYSTVYLAMSYTPPSVE 537
>ref|XP_003526949.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Glycine max]
Length = 540
Score = 426 bits (1094), Expect = e-116
Identities = 241/541 (44%), Positives = 330/541 (60%), Gaps = 7/541 (1%)
Frame = -1
Query: 1775 TIDCIGEDLLRNVVGRLRAVDFASSACVSRSWNRLCNSILSIPKFSSALSLNPSIEVAVD 1596
++ + EDLL+N++ RL ++ FAS+ACVS+SWN LC+ ILS PK SSA+SLNPS+ AV+
Sbjct: 28 SLSMLNEDLLQNILARLPSLHFASAACVSKSWNSLCSRILSRPKLSSAISLNPSLPDAVN 87
Query: 1595 EVFSKVFGEPIRPHFAIVSIGSSFGLHEARSLVTAKLGYNIPIICTTPFGLMGKDVATDT 1416
EV KV EPIRPHFAI +IG+ F + L+ LG+NIP+I T G+MG+D TD
Sbjct: 88 EVVHKVLSEPIRPHFAIANIGTGFNTAKTLCLIRKSLGFNIPVIVTVANGIMGRDAVTDE 147
Query: 1415 FKXXXXXXXXXXXDVSHGSLFEQLLYEDPNSMFRKKTPKNPAVLLTVGFLPGLKIAAVTL 1236
FK V G+LF E N ++LTVG+LPGLK+ A+ L
Sbjct: 148 FKE-----------VKWGALFSGFGEESYTRFI------NEGLVLTVGYLPGLKVEALPL 190
Query: 1235 QRTDKVGPL--VDEFVTDIRECSAIHSGQTSPLAIMLFADIKTDTDRLLEKLDYAMSPET 1062
+R K VD F+ DI+E SA S P+ I+LF + +D +LEKLD+AM +
Sbjct: 191 RRPTKTSQATWVDNFIKDIKEYSASVSSSPFPVGIILFGEASSDMKLVLEKLDHAMPMDM 250
Query: 1061 VIVGDGSG----VLLCGGNCQQENHRQKNFRSNHHSGVALLFMCDRDKPHGIGTIRFDVA 894
VIVGD G V G + + ++ N + VAL+F DRD+ +GTIRF VA
Sbjct: 251 VIVGDERGSFDFVHKSGNDSRIICSKKGNIEA-----VALVFAQDRDR--SLGTIRFHVA 303
Query: 893 LSTGMSPVGPKYNAVSVREKSGEGTTWLTAKREGLKERLDGQTILNQIYEEMPDRVQYPA 714
LS G+S VGP+Y A SV+ + + +TWLTA+REG +E LDGQ+IL I + + ++ P
Sbjct: 304 LSNGVSTVGPRYKAASVKSNNADCSTWLTARREGQQENLDGQSILLDINNLLDNHIESPD 363
Query: 713 FYLGIVKRRKCLVGSDEVRWITSQVFHQVDGGDEEYLYVEGSGIRTGDFFRVFQTDSNLA 534
Y+G++K RK G+++ T +H V GGDEEYLYV+G GI+TGD F+ + +D N A
Sbjct: 364 LYIGVIKHRKLSTGAEKPMPRTCIAYHGVVGGDEEYLYVDGIGIKTGDIFQFYYSDPNTA 423
Query: 533 LSTLRTVRDKFRSLKQNNGAGSSNMTIRPTQGANNT-IFGGFVFTCSGRGEHFFGKPNVD 357
L++L V D +S+ + SS G N T +FGG VF C GRGE FFG+ NVD
Sbjct: 424 LASLTKVHDALKSIHLEKNSKSSK-----GDGDNATNVFGGIVFACYGRGESFFGRHNVD 478
Query: 356 SAPFLENFPGVTLAGLFCGGEICRGDSSSYDQESQQGSYRCSVHSFSSVYLIMSYTPTTP 177
S+PFLENFPGV ++G+FCGGE+ R ++ Q C +H +S+VYL MSYTP +
Sbjct: 479 SSPFLENFPGVPVSGIFCGGEMVRPCTTVIGQCEGASPISCCLHVYSTVYLAMSYTPPSV 538
Query: 176 E 174
E
Sbjct: 539 E 539
>ref|XP_002322271.1| f-box family protein [Populus trichocarpa]
gi|222869267|gb|EEF06398.1| f-box family protein [Populus
trichocarpa]
Length = 533
Score = 416 bits (1070), Expect = e-114
Identities = 244/564 (43%), Positives = 341/564 (60%), Gaps = 10/564 (1%)
Frame = -1
Query: 1838 TDMETKTKECEMDGDNSRRLITIDCIGEDLLRNVVGRLRAVDFASSACVSRSWNRLCNSI 1659
T +E K KE + + + I EDL+ N++ RL A+ FAS+ACVS+SWN++CN I
Sbjct: 3 TTIEEKPKEPKTP------MTSFASINEDLILNILKRLPALSFASAACVSKSWNQICNQI 56
Query: 1658 LSIPKFSSALSLNPSIEVAVDEVFSKVFGEPIRPHFAIVS-IGSSFGLHEARSLVTAKLG 1482
L PKF+SA SLNP +VA++EV +KV EPIRPHFAI + IGS L E + + KLG
Sbjct: 57 LYKPKFASAFSLNPDEKVALEEVVNKVLSEPIRPHFAIANVIGSGVDLSERLNFLATKLG 116
Query: 1481 YNIPIICTTPFGLMGKDVATDTFKXXXXXXXXXXXDVSHGSLFEQLLYEDPNSMFRKKTP 1302
+ PII + G+MG+D TD H + + + D S P
Sbjct: 117 FQTPIIVSCTSGIMGRDAVTD----------------EHREVMLEEYWVDGES-----NP 155
Query: 1301 KNPAVLLTVGFLPGLKIAAVTLQRTDKV--GPLVDEFVTDIRECSAIHSGQTSPLAIMLF 1128
N ++LTVGFLPGLK+ A+ L + K +VD FV DI++ + SG SP+ I++F
Sbjct: 156 CN-GIILTVGFLPGLKVDAIPLFQPRKGCRATMVDNFVMDIKDYATSISGCASPVGIIMF 214
Query: 1127 ADIKTDTDRLLEKLDYAMSPETVIVGDGSGVLLCGGNCQQENHRQKNFRSNHHSGVALLF 948
D D ++EKLD+AMS +T+I+GD L + N + + + VAL+F
Sbjct: 215 GDEDADQKPVMEKLDHAMSSDTIIIGDERAQFLYRNGVESRNDYESS--EYFSAAVALVF 272
Query: 947 MCDRDKPHGIGTIRFDVALSTGMSPVGPKYNAVSVRE-KSGEG-TTWLTAKREGLKERLD 774
DRDKP G G I+F ALS+G+S VGP+Y AVSV++ SG G TTWLTA+REG E D
Sbjct: 273 ARDRDKPCGTGEIQFHAALSSGVSAVGPRYKAVSVKKIVSGTGHTTWLTARREGEHEIQD 332
Query: 773 GQTILNQIYEEMPDRVQYPAFYLGIVKRRKCLVGSDEVRWITSQVFHQVDGGDEEYLYVE 594
GQ IL+ I E+ ++V +P Y+G+ ++R+C +GS + R +T VFH V GGD+EYL+ +
Sbjct: 333 GQRILDDINNELVNQVGHPDLYIGVTEQRRCFIGSQKSRVMTFLVFHGVMGGDQEYLFAD 392
Query: 593 GSGIRTGDFFRVFQTDSNLALSTLRTVRDKFRSLKQNNGAGSSNMTIRP----TQGANNT 426
G GIRTGD+F+ + D + ALS+ V FR+L N SS + N
Sbjct: 393 GVGIRTGDYFQFYHPDPSAALSSCSNVSKNFRNL---NLDWSSRNCLHARGVYDNVCNKE 449
Query: 425 IFGGFVFTCSGRGEHFFGKPNVDSAPFLENFPGVTLAGLFCGGEICRGDS-SSYDQESQQ 249
+ GGFVF+C GRGE FF + NVDS+PFL+NFPG +AG+FC GEI RG S + D+ ++
Sbjct: 450 LVGGFVFSCCGRGESFFERCNVDSSPFLDNFPGFPMAGIFCRGEIGRGFSVFNADEGQEE 509
Query: 248 GSYRCSVHSFSSVYLIMSYTPTTP 177
+ C +H +S+VYL++SYTP P
Sbjct: 510 RTSHCCLHVYSAVYLLVSYTPAHP 533