BLASTX nr result
ID: Bupleurum21_contig00004134
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00004134
(1603 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16337.3| unnamed protein product [Vitis vinifera] 118 4e-24
ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|2... 112 3e-22
ref|XP_002330022.1| chromatin remodeling complex subunit [Populu... 102 3e-19
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu... 96 4e-17
ref|XP_002328309.1| chromatin remodeling complex subunit [Populu... 93 2e-16
>emb|CBI16337.3| unnamed protein product [Vitis vinifera]
Length = 805
Score = 118 bits (296), Expect = 4e-24
Identities = 87/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Frame = +1
Query: 967 ENTTLLFGQTSLLTGQ---TVQENLVTGTSVMRQPAHKQPEILQQIEAPVLQNQPDLPST 1137
EN L Q +L TG T Q + G+S+ + Q+ ++N +
Sbjct: 349 ENPVELSNQAALQTGAHLATEQSSSELGSSIQNS------QTPTQLVEDSVENTCREGGS 402
Query: 1138 NTVDHQQPITFLQS--EALPQ-VTGSTTELPRQAVIPTGA------STSVIQGSNDIPLG 1290
+ + Q P ++S E L Q V+ S T L I T A +T +I G ++ P+
Sbjct: 403 SFQNAQTPTQLVESSVELLNQAVSQSVTHLAVHQPIDTLAGGSDTRTTPIISGLSNRPIQ 462
Query: 1291 AEHQVPSRIPKLTSYNDPLQNQLEGIRKETEETIKLHKDTKMKLDS----ELEEIIAQAR 1458
VP R+P L ++DPLQN+LE IRKE ++TIK+H+DTK +L S E+EE++AQ R
Sbjct: 463 TAPPVPLRMP-LPLHSDPLQNELERIRKEIDQTIKIHEDTKQQLKSDCEKEIEEVVAQLR 521
Query: 1459 RLYEGKHKDADAAFQRKKNELDKNHNKVLMNKILADAFRSKCVE 1590
Y+ K +D +A F KK ELD N KV MNKILADAFRSKC++
Sbjct: 522 GKYDAKLQDVEATFVLKKMELDINQKKVTMNKILADAFRSKCMD 565
>ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|223531092|gb|EEF32941.1|
mom(plant), putative [Ricinus communis]
Length = 1982
Score = 112 bits (280), Expect = 3e-22
Identities = 73/205 (35%), Positives = 111/205 (54%), Gaps = 29/205 (14%)
Frame = +1
Query: 1063 AHKQPEILQQ--IEAPVLQNQPDLPSTNTVDHQQP----ITF-LQSEALPQV-------- 1197
AH +LQ E+ + N DLPST+ HQ IT + ++P V
Sbjct: 1544 AHVAEHVLQMPPTESAISVNAMDLPSTSETQHQSNHEDFITCNIAGTSMPMVEDQVQCSD 1603
Query: 1198 -------TGSTTELPRQAVIPTGASTSVIQGSNDIPLGA-------EHQVPSRIPKLTSY 1335
T +T LP A IP S + + + +P+ + + P R+P L Y
Sbjct: 1604 LAISQHGTHTTQHLP--ADIPVHGSGTHVSDTRTLPISSGVNNYTVQTVPPVRVPPLPFY 1661
Query: 1336 NDPLQNQLEGIRKETEETIKLHKDTKMKLDSELEEIIAQARRLYEGKHKDADAAFQRKKN 1515
+DPLQ +LE +RKE ++ + H++TK++L S+ E+ +AQ R+ YE K ++ ++ F KK
Sbjct: 1662 HDPLQVELERLRKEADQIVNAHENTKLQLKSDCEQEVAQIRKKYEVKLQELESEFLMKKK 1721
Query: 1516 ELDKNHNKVLMNKILADAFRSKCVE 1590
E+D N KVLMNKILA+AFRSKC++
Sbjct: 1722 EMDMNEKKVLMNKILAEAFRSKCMD 1746
Score = 59.3 bits (142), Expect = 3e-06
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Frame = +1
Query: 1 EIEELNRYWEAQRVEVEDKLKVESAIIKEMYSHVAVREEKLKTLDNECTMKLEEIQQQKE 180
EI E N+ + ++ ++E K K E+A+I+ ++S+ ++R+ KLK LD E K EE++QQ
Sbjct: 1066 EIVEFNKKYNEEKAQLEYKQKTEAAVIR-LHSNSSMRKNKLKLLDIEYKKKFEELEQQMV 1124
Query: 181 IMLKQLKAKQFIASSTENKKVAQFLEEARSVATAVADQDELQLHRSDVQNEVGYSHSGKH 360
I K L+ A K+ A +LE +S A +++L N++G H
Sbjct: 1125 IRRKDLEEMHMAARDKLKKRKACWLEGVKSWA-------QVELINKPPSNKIG------H 1171
Query: 361 GSSNVSEDDAAL-SMHPNVFAGDTNIIKMMPDKTCVTDQHRDASFRSCDNVVTTTENI 531
N + ++ L +P V G N K +P + T D V +T E I
Sbjct: 1172 NQENAASVNSYLKKQNPEVIQGMQN--KKVPLEVPETVSSDDDDDYLLPGVQSTNEQI 1227
>ref|XP_002330022.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222871447|gb|EEF08578.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 1441
Score = 102 bits (254), Expect = 3e-19
Identities = 52/95 (54%), Positives = 72/95 (75%), Gaps = 4/95 (4%)
Frame = +1
Query: 1312 RIPKLTSYNDPLQNQLEGIRKETEETIKLHKDTKMKLDS----ELEEIIAQARRLYEGKH 1479
R+P TS DPLQN+L+ IR ET++ IK+H+DTK++L S E++E++AQ RR Y+ K
Sbjct: 1082 RMPVSTS-QDPLQNELDRIRTETDQIIKIHEDTKLRLKSDCEKEIQEVVAQIRRTYDFKL 1140
Query: 1480 KDADAAFQRKKNELDKNHNKVLMNKILADAFRSKC 1584
+D + F RKK E+D N +KVLMNKILA+AFR+KC
Sbjct: 1141 QDLEYEFLRKKKEMDDNQSKVLMNKILAEAFRTKC 1175
>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222857313|gb|EEE94860.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 2283
Score = 95.5 bits (236), Expect = 4e-17
Identities = 66/181 (36%), Positives = 102/181 (56%), Gaps = 13/181 (7%)
Frame = +1
Query: 1087 QQIEAPVLQNQPDLPSTNTVDHQQPITFL----QSEALPQVTGSTTELPRQAVIPTGAST 1254
QQ++A L +QP + S ++ P+T L S A Q T S E I G S
Sbjct: 1885 QQVDA--LASQPFVASDHS-HSDAPVTELLPSMDSSAGSQPTTSFAEHAPANSIAVGESG 1941
Query: 1255 SVIQGSNDIPL-----GAEHQVPSRIPKLTSYNDPLQNQLEGIRKETEETIKLHKDTKMK 1419
+ I + P+ P+ ++ DPLQN+L+ I +ETE+ IK+H+DTK++
Sbjct: 1942 TRISNTMTAPVTSIISNCPVTAPAVRMPVSMSQDPLQNELDRICRETEQIIKIHEDTKLQ 2001
Query: 1420 LDS----ELEEIIAQARRLYEGKHKDADAAFQRKKNELDKNHNKVLMNKILADAFRSKCV 1587
L S E++E++AQ R ++ K ++ ++ F RKK E+ N NKV +NKILA+AFRSKC+
Sbjct: 2002 LKSDCEKEIQEVVAQIRTKHDIKLQEIESEFLRKKKEMADNQNKVFLNKILAEAFRSKCM 2061
Query: 1588 E 1590
+
Sbjct: 2062 D 2062
>ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222837824|gb|EEE76189.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 1996
Score = 93.2 bits (230), Expect = 2e-16
Identities = 44/88 (50%), Positives = 68/88 (77%), Gaps = 4/88 (4%)
Frame = +1
Query: 1339 DPLQNQLEGIRKETEETIKLHKDTKMKLDSELE----EIIAQARRLYEGKHKDADAAFQR 1506
DPLQN+L+ + KETEE IK+H+DTK++L S+ E E++AQ + ++ K ++ ++ FQ
Sbjct: 1677 DPLQNELDRLSKETEEIIKIHEDTKLQLKSDCEKEIVEVVAQIHKKHDIKLQEIESDFQC 1736
Query: 1507 KKNELDKNHNKVLMNKILADAFRSKCVE 1590
KK E++ N NKVLMNKILA+AF++KC++
Sbjct: 1737 KKKEMNDNQNKVLMNKILAEAFKTKCMD 1764