BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004118
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297750.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|NP_001065723.1| Os11g0143400 [Oryza sativa Japonica Group] g...    86   3e-15
ref|NP_001066119.1| Os12g0139500 [Oryza sativa Japonica Group] g...    86   3e-15
gb|ABA96407.2| RNA polymerase Rpb5, N-terminal domain containing...    86   3e-15
gb|EAY79909.1| hypothetical protein OsI_35073 [Oryza sativa Indi...    83   2e-14

>ref|XP_002297750.1| predicted protein [Populus trichocarpa] gi|222845008|gb|EEE82555.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/79 (56%), Positives = 58/79 (73%)
 Frame = -2

Query: 252 CVARFIDRGSVESHRLFLARRTVLEMLRDRGYDVDESEINLSLDEFRSEFGESAELAGRL 73
           C+  F+D GS ES+R +++RRTVLEML+DRGYDV +SE+N SL EFRS FG S +L   L
Sbjct: 24  CLTDFVDEGSAESYRYYISRRTVLEMLKDRGYDVLDSELNRSLTEFRSVFGNSPDL-DSL 82

Query: 72  RFSVSLIGKPSEKEVSVML 16
           RFSVSL   P +K + + L
Sbjct: 83  RFSVSLRSIPHKKTLVMFL 101


>ref|NP_001065723.1| Os11g0143400 [Oryza sativa Japonica Group]
           gi|77548620|gb|ABA91417.1| RNA polymerase Rpb5,
           N-terminal domain containing protein, expressed [Oryza
           sativa Japonica Group] gi|113644427|dbj|BAF27568.1|
           Os11g0143400 [Oryza sativa Japonica Group]
           gi|125576186|gb|EAZ17408.1| hypothetical protein
           OsJ_32930 [Oryza sativa Japonica Group]
          Length = 227

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/83 (56%), Positives = 58/83 (69%)
 Frame = -2

Query: 282 VGVEESPAKHCVARFIDRGSVESHRLFLARRTVLEMLRDRGYDVDESEINLSLDEFRSEF 103
           V V E P   C+A  IDRGSVESHRLFLARRT +EMLRDRGY V E+EI  +L EFR+ +
Sbjct: 10  VDVHEVP--ECIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWW 67

Query: 102 GESAELAGRLRFSVSLIGKPSEK 34
            E   +  RL F+ +L+  PS+K
Sbjct: 68  AEKPGIE-RLAFTTTLVSDPSKK 89


>ref|NP_001066119.1| Os12g0139500 [Oryza sativa Japonica Group]
           gi|113648626|dbj|BAF29138.1| Os12g0139500 [Oryza sativa
           Japonica Group] gi|125535725|gb|EAY82213.1| hypothetical
           protein OsI_37416 [Oryza sativa Indica Group]
           gi|125578454|gb|EAZ19600.1| hypothetical protein
           OsJ_35178 [Oryza sativa Japonica Group]
           gi|346703760|emb|CBX24428.1| hypothetical_protein [Oryza
           glaberrima]
          Length = 227

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/83 (56%), Positives = 58/83 (69%)
 Frame = -2

Query: 282 VGVEESPAKHCVARFIDRGSVESHRLFLARRTVLEMLRDRGYDVDESEINLSLDEFRSEF 103
           V V E P   C+A  IDRGSVESHRLFLARRT +EMLRDRGY V E+EI  +L EFR+ +
Sbjct: 10  VDVHEVP--ECIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWW 67

Query: 102 GESAELAGRLRFSVSLIGKPSEK 34
            E   +  RL F+ +L+  PS+K
Sbjct: 68  AEKPGIE-RLAFTTTLVSDPSKK 89


>gb|ABA96407.2| RNA polymerase Rpb5, N-terminal domain containing protein,
           expressed [Oryza sativa Japonica Group]
          Length = 335

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/83 (56%), Positives = 58/83 (69%)
 Frame = -2

Query: 282 VGVEESPAKHCVARFIDRGSVESHRLFLARRTVLEMLRDRGYDVDESEINLSLDEFRSEF 103
           V V E P   C+A  IDRGSVESHRLFLARRT +EMLRDRGY V E+EI  +L EFR+ +
Sbjct: 118 VDVHEVP--ECIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWW 175

Query: 102 GESAELAGRLRFSVSLIGKPSEK 34
            E   +  RL F+ +L+  PS+K
Sbjct: 176 AEKPGIE-RLAFTTTLVSDPSKK 197


>gb|EAY79909.1| hypothetical protein OsI_35073 [Oryza sativa Indica Group]
          Length = 227

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/83 (55%), Positives = 57/83 (68%)
 Frame = -2

Query: 282 VGVEESPAKHCVARFIDRGSVESHRLFLARRTVLEMLRDRGYDVDESEINLSLDEFRSEF 103
           V V E P   C+A  IDRGSVESHRLFLARRT +EMLRDRGY V E+EI  +  EFR+ +
Sbjct: 10  VDVHEVP--ECIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTPPEFRAWW 67

Query: 102 GESAELAGRLRFSVSLIGKPSEK 34
            E   +  RL F+ +L+  PS+K
Sbjct: 68  AEKPGIE-RLAFTTTLVSDPSKK 89