BLASTX nr result

ID: Bupleurum21_contig00004117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004117
         (1369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516481.1| 3'-5' exonuclease, putative [Ricinus communi...   554   e-155
ref|XP_002276186.1| PREDICTED: uncharacterized protein LOC100259...   546   e-153
ref|XP_002324746.1| predicted protein [Populus trichocarpa] gi|2...   545   e-152
ref|XP_004142915.1| PREDICTED: uncharacterized protein LOC101214...   531   e-148
emb|CBI35995.3| unnamed protein product [Vitis vinifera]              527   e-147

>ref|XP_002516481.1| 3'-5' exonuclease, putative [Ricinus communis]
            gi|223544301|gb|EEF45822.1| 3'-5' exonuclease, putative
            [Ricinus communis]
          Length = 342

 Score =  554 bits (1428), Expect = e-155
 Identities = 268/337 (79%), Positives = 298/337 (88%), Gaps = 1/337 (0%)
 Frame = -2

Query: 1296 TSHQTQFSVPCNPGG-ETLSNNGNLHPVPIFIVTHASQLPKEFLEPSPDRQLVIGFDCEG 1120
            +SHQT   +P + GG + L +   L  VPI +VT ASQLP EFL P+PD+QL+IGFDCEG
Sbjct: 6    SSHQTHIPLPSDSGGNKPLDHEAQLSLVPIHVVTDASQLPAEFLNPTPDKQLIIGFDCEG 65

Query: 1119 VDLCRNGTLCIMQLAFPDAIYLVDAIQGGEVLVQACKPALESVNITKVIHDCKRDSEALY 940
            VDLCR+GTLCIMQ+AFPDAI+LVDA QGGE+L++ACKPALES  ITKVIHDCKRDSEALY
Sbjct: 66   VDLCRHGTLCIMQIAFPDAIFLVDATQGGEMLLKACKPALESSYITKVIHDCKRDSEALY 125

Query: 939  FQFGIKLHNVVDTQIAYSLIEEQEGRTKAPDDYISFVGLLADPRYCGVSYLEKEEVRYLL 760
            FQFGIKLHNV DTQIAYSLIEEQEGRTK PDDYISFVGLLADPRYCG+SYLEKEEVR LL
Sbjct: 126  FQFGIKLHNVFDTQIAYSLIEEQEGRTKLPDDYISFVGLLADPRYCGISYLEKEEVRLLL 185

Query: 759  RQDPNFWIYRPLSEQMVRAAADDVRFLLSIYYKMVKKLNQRSLWYLSVRGALYCRCFCIS 580
            RQD NFW YRPLSE M+RAAADDVRFLL IY+KM+KKLNQRSLWYL+VR ALYCRCFC +
Sbjct: 186  RQDSNFWTYRPLSELMIRAAADDVRFLLYIYHKMIKKLNQRSLWYLAVRSALYCRCFCTN 245

Query: 579  GNNYADWPSLPQVPDNLIAENTAIDEEVLSVLDVPPGKMGCIIGRRGASILSIKESCNAE 400
             NNYADWPS+P +P NL+ +  A +EE+LSVL VPPGKMG +IGRRGASILSIKESCNAE
Sbjct: 246  DNNYADWPSIPPIPGNLVGDGNAPEEEILSVLGVPPGKMGRVIGRRGASILSIKESCNAE 305

Query: 399  IFIGGAKGPPDKVFIIGPVKQVRKAEAMLRGKMQEIY 289
            IFIGG+KGPPDKVFIIGPVKQVRKAEA+LRGKM EIY
Sbjct: 306  IFIGGSKGPPDKVFIIGPVKQVRKAEAILRGKMLEIY 342


>ref|XP_002276186.1| PREDICTED: uncharacterized protein LOC100259526 [Vitis vinifera]
            gi|147856945|emb|CAN82846.1| hypothetical protein
            VITISV_007988 [Vitis vinifera]
            gi|296081603|emb|CBI20608.3| unnamed protein product
            [Vitis vinifera]
          Length = 341

 Score =  546 bits (1406), Expect = e-153
 Identities = 266/335 (79%), Positives = 299/335 (89%)
 Frame = -2

Query: 1293 SHQTQFSVPCNPGGETLSNNGNLHPVPIFIVTHASQLPKEFLEPSPDRQLVIGFDCEGVD 1114
            S  T   +P +PGG+ + + G L  VPI IVT  SQLP EFLEPSP+R+LVIGFDCEGVD
Sbjct: 7    SQPTYIPMPSDPGGKPIDHEGLLPLVPIHIVTLPSQLPIEFLEPSPERKLVIGFDCEGVD 66

Query: 1113 LCRNGTLCIMQLAFPDAIYLVDAIQGGEVLVQACKPALESVNITKVIHDCKRDSEALYFQ 934
            LCR+GTLCIMQ+AFPDAIYLVDAIQGGE+L++ACKPALES  ITKVIHDCKRDSEALYFQ
Sbjct: 67   LCRHGTLCIMQIAFPDAIYLVDAIQGGEMLMKACKPALESSYITKVIHDCKRDSEALYFQ 126

Query: 933  FGIKLHNVVDTQIAYSLIEEQEGRTKAPDDYISFVGLLADPRYCGVSYLEKEEVRYLLRQ 754
            FGIKLHNVVDTQIAYSLIEEQEGR +  DDYISFVGLLADPRYCGVSYLEK+EVR LLRQ
Sbjct: 127  FGIKLHNVVDTQIAYSLIEEQEGRKRLVDDYISFVGLLADPRYCGVSYLEKQEVRDLLRQ 186

Query: 753  DPNFWIYRPLSEQMVRAAADDVRFLLSIYYKMVKKLNQRSLWYLSVRGALYCRCFCISGN 574
            +P+FW +RPLS+ MVRAAADDVRFLL IY+KM++KLN+RSLWYL+VRGALYCRCFCI+ N
Sbjct: 187  NPDFWTHRPLSDLMVRAAADDVRFLLYIYHKMMEKLNERSLWYLAVRGALYCRCFCINDN 246

Query: 573  NYADWPSLPQVPDNLIAENTAIDEEVLSVLDVPPGKMGCIIGRRGASILSIKESCNAEIF 394
            +YADWP LP +PDNLI E  A +EE+LSVL VPPGKMG +IGRRGASILS+KESCNAEI 
Sbjct: 247  DYADWPPLPPIPDNLIVEGNAPEEEILSVLHVPPGKMGRVIGRRGASILSVKESCNAEIL 306

Query: 393  IGGAKGPPDKVFIIGPVKQVRKAEAMLRGKMQEIY 289
            IGGAKGPPDKVFIIGPVKQVRKAEA+LRG+M E+Y
Sbjct: 307  IGGAKGPPDKVFIIGPVKQVRKAEAILRGRMLEMY 341


>ref|XP_002324746.1| predicted protein [Populus trichocarpa] gi|222866180|gb|EEF03311.1|
            predicted protein [Populus trichocarpa]
          Length = 331

 Score =  545 bits (1403), Expect = e-152
 Identities = 264/336 (78%), Positives = 293/336 (87%)
 Frame = -2

Query: 1296 TSHQTQFSVPCNPGGETLSNNGNLHPVPIFIVTHASQLPKEFLEPSPDRQLVIGFDCEGV 1117
            +SHQT   +P +P           H VPI +VT  SQLP EFL PS  +QL+IGFDCEGV
Sbjct: 6    SSHQTHTPLPSDPD----------HEVPIHVVTEPSQLPAEFLNPSAAKQLIIGFDCEGV 55

Query: 1116 DLCRNGTLCIMQLAFPDAIYLVDAIQGGEVLVQACKPALESVNITKVIHDCKRDSEALYF 937
            DLCR+GTLCIMQLAFPDAIYLVDAI+GGE L++ACKPALES +ITKVIHDCKRDSEALYF
Sbjct: 56   DLCRHGTLCIMQLAFPDAIYLVDAIKGGESLIRACKPALESSHITKVIHDCKRDSEALYF 115

Query: 936  QFGIKLHNVVDTQIAYSLIEEQEGRTKAPDDYISFVGLLADPRYCGVSYLEKEEVRYLLR 757
            QFGIKLHNVVDTQIAYS IEEQEGRT+ PDDYISFVGLLADPRYCG+SYLEKEEVR LLR
Sbjct: 116  QFGIKLHNVVDTQIAYSQIEEQEGRTRLPDDYISFVGLLADPRYCGISYLEKEEVRVLLR 175

Query: 756  QDPNFWIYRPLSEQMVRAAADDVRFLLSIYYKMVKKLNQRSLWYLSVRGALYCRCFCISG 577
            QDP FW YRPLSE M+ AAADDVRFLL IYYKM++KLNQRSLWYL+VRG LYCRCFCI+ 
Sbjct: 176  QDPMFWTYRPLSEMMIHAAADDVRFLLRIYYKMMEKLNQRSLWYLAVRGVLYCRCFCINE 235

Query: 576  NNYADWPSLPQVPDNLIAENTAIDEEVLSVLDVPPGKMGCIIGRRGASILSIKESCNAEI 397
            N+YADWP +P +PDNLI E+ A +EE+LSVLDVPPGKMG +IGRRGASILS+KESCNAEI
Sbjct: 236  NDYADWPHIPPIPDNLIIEDNAPEEEILSVLDVPPGKMGRVIGRRGASILSVKESCNAEI 295

Query: 396  FIGGAKGPPDKVFIIGPVKQVRKAEAMLRGKMQEIY 289
            FIGGAKGP DKVFI+GPVKQVRKAEAMLRGKM +I+
Sbjct: 296  FIGGAKGPTDKVFIVGPVKQVRKAEAMLRGKMLDIF 331


>ref|XP_004142915.1| PREDICTED: uncharacterized protein LOC101214970 [Cucumis sativus]
            gi|449522022|ref|XP_004168027.1| PREDICTED:
            uncharacterized protein LOC101223734 [Cucumis sativus]
          Length = 340

 Score =  531 bits (1367), Expect = e-148
 Identities = 259/340 (76%), Positives = 290/340 (85%), Gaps = 2/340 (0%)
 Frame = -2

Query: 1305 MAHT--SHQTQFSVPCNPGGETLSNNGNLHPVPIFIVTHASQLPKEFLEPSPDRQLVIGF 1132
            MA+T  SHQT   +P + G        N   VPI IVTH SQLPKEF+EPSP++ LV+GF
Sbjct: 1    MANTPPSHQTCIPLPSDSGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSPEKPLVVGF 60

Query: 1131 DCEGVDLCRNGTLCIMQLAFPDAIYLVDAIQGGEVLVQACKPALESVNITKVIHDCKRDS 952
            DCEGVDLCR+G LC+MQ+AFPDA+YLVDA+QGGE LV+ CKPALES  +TKVIHDCKRDS
Sbjct: 61   DCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDS 120

Query: 951  EALYFQFGIKLHNVVDTQIAYSLIEEQEGRTKAPDDYISFVGLLADPRYCGVSYLEKEEV 772
            EALYFQFGIKL+NV+DTQIAYSL+EEQEGRTK PD+YISFV LLAD RYCGVSY+EKEEV
Sbjct: 121  EALYFQFGIKLNNVIDTQIAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEV 180

Query: 771  RYLLRQDPNFWIYRPLSEQMVRAAADDVRFLLSIYYKMVKKLNQRSLWYLSVRGALYCRC 592
            R LLR+DP FW YRP+SE MVRAAADDVRFLL IY+KM++KLN RSLWYL+VRGALYCRC
Sbjct: 181  RLLLRKDPKFWTYRPMSELMVRAAADDVRFLLYIYHKMMEKLNHRSLWYLAVRGALYCRC 240

Query: 591  FCISGNNYADWPSLPQVPDNLIAENTAIDEEVLSVLDVPPGKMGCIIGRRGASILSIKES 412
            FCIS N YADWP LP VPDNL+ E  A +EE+LSVLDVP G MG +IGRRGASILSIKES
Sbjct: 241  FCISDNGYADWPPLPSVPDNLVKEGNAPEEEILSVLDVPHGMMGRVIGRRGASILSIKES 300

Query: 411  CNAEIFIGGAKGPPDKVFIIGPVKQVRKAEAMLRGKMQEI 292
            CNAEI IGGAKGPPDKV IIG V+QVRKAEAMLRG+M EI
Sbjct: 301  CNAEILIGGAKGPPDKVLIIGSVRQVRKAEAMLRGRMLEI 340


>emb|CBI35995.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  527 bits (1358), Expect = e-147
 Identities = 252/330 (76%), Positives = 291/330 (88%)
 Frame = -2

Query: 1290 HQTQFSVPCNPGGETLSNNGNLHPVPIFIVTHASQLPKEFLEPSPDRQLVIGFDCEGVDL 1111
            HQT   +P + GG+   +   L  VPI+IVTHASQLPK+FL PSP RQLVIGFDCEGVDL
Sbjct: 38   HQTYIPLPSDSGGQHPDHAALLSLVPIYIVTHASQLPKDFLVPSPVRQLVIGFDCEGVDL 97

Query: 1110 CRNGTLCIMQLAFPDAIYLVDAIQGGEVLVQACKPALESVNITKVIHDCKRDSEALYFQF 931
            CR+G+LCIMQLAFPDAIYLVDAIQGGE L++ACKPALES  ITKVIHDCKRDSEALYFQF
Sbjct: 98   CRHGSLCIMQLAFPDAIYLVDAIQGGEKLMKACKPALESSYITKVIHDCKRDSEALYFQF 157

Query: 930  GIKLHNVVDTQIAYSLIEEQEGRTKAPDDYISFVGLLADPRYCGVSYLEKEEVRYLLRQD 751
            GIKLHNVVD+QIAYSLIEEQ+GR ++PDDYISFVGLLADPRYCG+SYLEK+EVR LL+QD
Sbjct: 158  GIKLHNVVDSQIAYSLIEEQQGRRRSPDDYISFVGLLADPRYCGISYLEKKEVRVLLKQD 217

Query: 750  PNFWIYRPLSEQMVRAAADDVRFLLSIYYKMVKKLNQRSLWYLSVRGALYCRCFCISGNN 571
            P FW YRPLSE MVRAAADDVRFL  IYYKM+++LN+ SLW L+VRGALYCRCFC++ N 
Sbjct: 218  PKFWTYRPLSELMVRAAADDVRFLPYIYYKMMEELNEHSLWKLAVRGALYCRCFCVNDNE 277

Query: 570  YADWPSLPQVPDNLIAENTAIDEEVLSVLDVPPGKMGCIIGRRGASILSIKESCNAEIFI 391
            YADWPSLP +P+NL+ +  A +EE+LSVL++P GKMGC+IGR+GASILSIK+ C AEI I
Sbjct: 278  YADWPSLPNMPENLMVDGKAPEEEILSVLEIPQGKMGCVIGRKGASILSIKQCCKAEILI 337

Query: 390  GGAKGPPDKVFIIGPVKQVRKAEAMLRGKM 301
            GGAKGPPD VFIIGPVK+VRKAEA+LRG++
Sbjct: 338  GGAKGPPDMVFIIGPVKEVRKAEAILRGRI 367


Top