BLASTX nr result

ID: Bupleurum21_contig00004106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004106
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|2...    74   5e-11
ref|XP_002275593.1| PREDICTED: importin subunit alpha-1 [Vitis v...    73   9e-11
ref|XP_004150082.1| PREDICTED: importin subunit alpha-1-like [Cu...    72   2e-10
ref|XP_002966958.1| hypothetical protein SELMODRAFT_439828 [Sela...    72   2e-10
ref|XP_003554623.1| PREDICTED: importin subunit alpha-1b-like [G...    71   4e-10

>ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|222857854|gb|EEE95401.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 11/260 (4%)
 Frame = +2

Query: 206 KLLEKVASKICSV--DDVGLQYDGTQQLADLITTDHR--LCDYIDSPVLDHLVGFLDNLD 373
           K LE +   +  V  DD  LQ + T Q   L++ +    + D I + V+   V FL   D
Sbjct: 74  KKLESLPMMVQGVWSDDPSLQLEATTQFRKLLSIERSPPIDDVIKAGVVPRFVEFLGRHD 133

Query: 374 DTKKNILGDKKLKNIQYYSNIVLTVVAC--SKKVTVIKDR-AIPAVLCVIPHAHMIGQVQ 544
                      L  +Q+ +   LT VA   S+   V+ D  A+P  + ++       + Q
Sbjct: 134 -----------LPQLQFEAAWALTNVASGTSEHTRVVIDHGAVPMFVQLLSSGSDDVREQ 182

Query: 545 ALWVLLNLCSISESSDXXXXXXXXXXXXXXXXXXSNPSEVLRLATELLAALCMMKPAQLF 724
           A+W L N+   S S                    ++   +LR AT  L+  C  KP   F
Sbjct: 183 AVWALGNVAGDSPSCRDLVLGHGALMPLLAQLNENSKLSMLRNATWTLSNFCRGKPPTPF 242

Query: 725 DKIEVVLRILGKIIKYEMISVIVPSCMAITYLSDDR----YVPIGGEVLVRLISLIDYPL 892
           D+++  L +L ++I      V+  +C A++YLSD +       I   V  RL+ L+ +P 
Sbjct: 243 DQVKPALPVLQQLIHLNDEEVLTDACWALSYLSDGQNDKIQAVIDAGVCRRLVELLLHPS 302

Query: 893 PEIVINALKSLGNCVRWGDD 952
           P ++I AL+++GN V  GDD
Sbjct: 303 PTVLIPALRTVGNIVT-GDD 321


>ref|XP_002275593.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera]
           gi|296083287|emb|CBI22923.3| unnamed protein product
           [Vitis vinifera]
          Length = 529

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 9/302 (2%)
 Frame = +2

Query: 104 KTNREKENYNPDENDIHVSPFVSEALAFTVGRKRKLLEKVASKICSVDDVGLQYDGTQQL 283
           K+ RE+         +    F + A A TV +K + L  + + + S D+  LQ + T Q 
Sbjct: 38  KSKREESLQKKRREGLQAQQFPAAAHASTVEKKLESLPSMVAGVWS-DNSSLQLEATTQF 96

Query: 284 ADLITTDHR--LCDYIDSPVLDHLVGFLDNLDDTKKNILGDKKLKNIQYYSNIVLTVVAC 457
             L++ +    + + I S V+   V FL   D              +Q+ +   LT +A 
Sbjct: 97  RKLLSIERSPPIEEVIQSGVVPRFVEFLVRED-----------FPQLQFEAAWALTNIAS 145

Query: 458 --SKKVTVIKDR-AIPAVLCVIPHAHMIGQVQALWVLLNLCSISESSDXXXXXXXXXXXX 628
             S+   V+ D  A+P  + ++       + QA+W L N+   S                
Sbjct: 146 GTSENTKVVIDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPRCRDLVLGHGALIPL 205

Query: 629 XXXXXXSNPSEVLRLATELLAALCMMKPAQLFDKIEVVLRILGKIIKYEMISVIVPSCMA 808
                      +LR AT  L+  C  KP   FD+++  L  L +++      V+  +C A
Sbjct: 206 LAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALPALERLVHSSDEEVLTDACWA 265

Query: 809 ITYLSDDR----YVPIGGEVLVRLISLIDYPLPEIVINALKSLGNCVRWGDDDLINDLIR 976
           ++YLSD         I   V  RL+ L+ +P P ++I AL+++GN V  GDD     +I 
Sbjct: 266 LSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVT-GDDIQTQSIIN 324

Query: 977 DG 982
            G
Sbjct: 325 HG 326


>ref|XP_004150082.1| PREDICTED: importin subunit alpha-1-like [Cucumis sativus]
           gi|449501502|ref|XP_004161385.1| PREDICTED: importin
           subunit alpha-1-like [Cucumis sativus]
          Length = 530

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 75/302 (24%), Positives = 127/302 (42%), Gaps = 9/302 (2%)
 Frame = +2

Query: 104 KTNREKENYNPDENDIHVSPFVSEALAFTVGRKRKLLEKVASKICSVDDVGLQYDGTQQL 283
           K+ RE+         +    F S     TV +K + L  + + + S D+  LQ + T Q 
Sbjct: 38  KSKREESLQKKRREGLQAQQFPSAVHTSTVEKKLESLPSMVAGVWS-DNSSLQLEATTQF 96

Query: 284 ADLITTDHR--LCDYIDSPVLDHLVGFLDNLDDTKKNILGDKKLKNIQYYSNIVLTVVAC 457
             L++ +    + + I S V+   V FL   D              +Q+ +   LT +A 
Sbjct: 97  RKLLSIERSPPIEEVIQSGVVPRFVEFLVRED-----------FPQLQFEAAWALTNIAS 145

Query: 458 --SKKVTVIKDR-AIPAVLCVIPHAHMIGQVQALWVLLNLCSISESSDXXXXXXXXXXXX 628
             S+   V+ D  A+P  + ++       + QA+W L N+   S +              
Sbjct: 146 GTSEHTKVVIDHGAVPIFVKLLASPSDDVREQAVWALGNVAGDSPTCRDLVLRHGALIPL 205

Query: 629 XXXXXXSNPSEVLRLATELLAALCMMKPAQLFDKIEVVLRILGKIIKYEMISVIVPSCMA 808
                      +LR AT  L+  C  KP   FD+++  L  L +++      V+  +C A
Sbjct: 206 LSQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALPALERLVHSNDEEVLTDACWA 265

Query: 809 ITYLSDDR----YVPIGGEVLVRLISLIDYPLPEIVINALKSLGNCVRWGDDDLINDLIR 976
           ++YLSD         I   V  RL+ L+ +P P ++I AL+++GN V  GDD     ++ 
Sbjct: 266 LSYLSDGTNDKIQAVIEAGVCGRLVQLLLHPSPSVLIPALRTVGNIVT-GDDIQTQWIVN 324

Query: 977 DG 982
           DG
Sbjct: 325 DG 326


>ref|XP_002966958.1| hypothetical protein SELMODRAFT_439828 [Selaginella moellendorffii]
           gi|300164949|gb|EFJ31557.1| hypothetical protein
           SELMODRAFT_439828 [Selaginella moellendorffii]
          Length = 527

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 73/273 (26%), Positives = 115/273 (42%), Gaps = 9/273 (3%)
 Frame = +2

Query: 191 VGRKRKLLEKVASKICSVDDVGLQYDGTQQLADLITTDHR--LCDYIDSPVLDHLVGFLD 364
           V RK + L  + S + S DD  LQ + T Q   L++ + R  + + I + V+   V FL 
Sbjct: 65  VERKLESLPVMVSGVWS-DDPNLQVEATTQFRKLLSIERRPPIEEVIKAGVVPRFVEFLK 123

Query: 365 NLDDTKKNILGDKKLKNIQYYSNIVLTVVACSKK---VTVIKDRAIPAVLCVIPHAHMIG 535
             D              +Q+ +   LT +A         VI   A+P  + ++       
Sbjct: 124 RHD-----------FHQLQFEAAWALTNIASGTSDHTTVVINHGAVPIFVQLLSSPSEDV 172

Query: 536 QVQALWVLLNLCSISESSDXXXXXXXXXXXXXXXXXXSNPSEVLRLATELLAALCMMKPA 715
           + QA+W L N+   S                      +    +LR AT  L+  C  KP 
Sbjct: 173 REQAVWALGNVAGDSPKCRDLVLNSNAMMPLLAQLNENAKLSMLRNATWTLSNFCRGKPQ 232

Query: 716 QLFDKIEVVLRILGKIIKYEMISVIVPSCMAITYLSDDR----YVPIGGEVLVRLISLID 883
             F++    L  L K+I      V+  +C A++Y+SD         I   V  RL+SL+ 
Sbjct: 233 PNFEQSRPALSALEKLIHSTDEEVLTDACWALSYISDGTNDKIQAVIEAGVCPRLVSLLM 292

Query: 884 YPLPEIVINALKSLGNCVRWGDDDLINDLIRDG 982
           YP P ++I AL+++GN V  GDD     +I +G
Sbjct: 293 YPSPNVLIPALRTVGNIVT-GDDVQTQFIINNG 324


>ref|XP_003554623.1| PREDICTED: importin subunit alpha-1b-like [Glycine max]
          Length = 532

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 11/295 (3%)
 Frame = +2

Query: 101 VKTNREKENYNPDENDIHVSPFVSEALAFTVGRKRKLLEKVASKICSV--DDVGLQYDGT 274
           ++ NR +E+      +   S  +  +L  TV  K+  LE + + +  V  DD  +Q++ T
Sbjct: 38  IRKNRREESLLKKRREGLQSQQIPSSLHSTVIEKK--LEHLPAMVTGVFTDDNNMQFEAT 95

Query: 275 QQLADLITTDHR--LCDYIDSPVLDHLVGFLDNLDDTKKNILGDKKLKNIQYYSNIVLTV 448
            Q   L++ +    + + I + V+   V FL   D              +Q+ +   LT 
Sbjct: 96  TQFRKLLSIERSPPIEEVIQAGVVPRFVEFLMRED-----------FPQLQFEAAWALTN 144

Query: 449 VAC--SKKVTVIKDR-AIPAVLCVIPHAHMIGQVQALWVLLNLCSISESSDXXXXXXXXX 619
           +A   S+   V+ D  A+P  + ++   +   + QA+W L N+   S             
Sbjct: 145 IASGTSENTKVVIDHGAVPIFVKLLGSPNDDVREQAVWALGNVAGDSPRCRDLVLGDGAL 204

Query: 620 XXXXXXXXXSNPSEVLRLATELLAALCMMKPAQLFDKIEVVLRILGKIIKYEMISVIVPS 799
                         +LR AT  L+  C  KP   FD+++  L  L  +I+     V+  +
Sbjct: 205 LPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPAFDQVKPALPALASLIQSTDEEVLTDA 264

Query: 800 CMAITYLSDDRYVPIGG----EVLVRLISLIDYPLPEIVINALKSLGNCVRWGDD 952
           C A++YLSD     I G     V  RL+ L+ +P P ++I AL+++GN V  GDD
Sbjct: 265 CWALSYLSDGTNDKIQGVIEAGVCSRLVELLLHPSPSVLIPALRTVGNIVT-GDD 318


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