BLASTX nr result

ID: Bupleurum21_contig00004098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004098
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336408.1| predicted protein [Populus trichocarpa] gi|2...   158   2e-36
ref|XP_002309827.1| predicted protein [Populus trichocarpa] gi|2...   157   3e-36
ref|XP_002327944.1| predicted protein [Populus trichocarpa] gi|2...   157   3e-36
ref|XP_002268984.1| PREDICTED: uncharacterized protein LOC100244...   154   3e-35
emb|CBI39173.3| unnamed protein product [Vitis vinifera]              153   5e-35

>ref|XP_002336408.1| predicted protein [Populus trichocarpa] gi|222834926|gb|EEE73375.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  158 bits (399), Expect = 2e-36
 Identities = 99/245 (40%), Positives = 135/245 (55%), Gaps = 4/245 (1%)
 Frame = -1

Query: 730 TTKDDNLNVGDSVSPAQ-NIEHISGRAEQAS---PINVNELPDPVKLEPEDIVNRFKPIN 563
           T ++   N+ D  S    N++      ++ S   P   N+LP  +      I +    I 
Sbjct: 72  TAEETITNLDDKTSTKSFNVQKSQTTGDERSTCPPDKDNKLPSSITKSDHTIADH---IF 128

Query: 562 VGVESPVQEKNLVDLRSEGSMVNSEEFVDEPKSAVQADTFKESKNDTRALSLDKSDVHLN 383
            G E  +  +  +     G     +E   + K A   D       D +      SDVHLN
Sbjct: 129 SGAEDGLLAQEKIIGNHSGDTTEIKEAGGD-KKAESTDGLGPGTLDDKKTVTVSSDVHLN 187

Query: 382 IRLPDCTYLQEKFSLISTLREVKSYVDENQGTSMRSYDLAIPYPRKVFGIEDLSKTLSEL 203
           IRLPD   LQEKFS+ STLR VK YVD NQ   + +YDLAIPYPRK F  +DLSK+LSEL
Sbjct: 188 IRLPDGVSLQEKFSVTSTLRMVKDYVDRNQAGGIGAYDLAIPYPRKTFTDQDLSKSLSEL 247

Query: 202 GLRDRQALILVPHSKVTSYRGEGSAFGHQATGINNTGSSNGSTEGYLSFVKRIISYVNPL 23
            L +RQAL++VPH + TSY   GS+   +AT   ++GS+N +  GY ++VKR++SYVNPL
Sbjct: 248 ALLNRQALMVVPHQRATSYHRGGSS-SDRATTTTSSGSANANDGGYFAYVKRVLSYVNPL 306

Query: 22  SYIGS 8
           SY G+
Sbjct: 307 SYFGA 311


>ref|XP_002309827.1| predicted protein [Populus trichocarpa] gi|222852730|gb|EEE90277.1|
           predicted protein [Populus trichocarpa]
          Length = 520

 Score =  157 bits (398), Expect = 3e-36
 Identities = 98/241 (40%), Positives = 138/241 (57%), Gaps = 2/241 (0%)
 Frame = -1

Query: 727 TKDDNLNVGDSVSPAQNI--EHISGRAEQASPINVNELPDPVKLEPEDIVNRFKPINVGV 554
           T++D  +   SV+   NI  +H S  AE           D +  + + + N     + GV
Sbjct: 228 TEEDKKSPSSSVTSTDNIIADHTSSAAE-----------DGLLAQEKSVSN-----HTGV 271

Query: 553 ESPVQEKNLVDLRSEGSMVNSEEFVDEPKSAVQADTFKESKNDTRALSLDKSDVHLNIRL 374
            +   E +  +++  G          + K+    D    + N+ + +++  SDVHLNIRL
Sbjct: 272 PTGGSELSTTEIKEVG----------DKKAESMDDMVPGTLNNNKKVNVS-SDVHLNIRL 320

Query: 373 PDCTYLQEKFSLISTLREVKSYVDENQGTSMRSYDLAIPYPRKVFGIEDLSKTLSELGLR 194
           PD   LQEKFS+ STLR VK YVD NQ + + +YDLAIPYPRK F  +DL+K+LSEL L 
Sbjct: 321 PDGVSLQEKFSVTSTLRTVKDYVDRNQASGIGAYDLAIPYPRKTFSDQDLNKSLSELSLL 380

Query: 193 DRQALILVPHSKVTSYRGEGSAFGHQATGINNTGSSNGSTEGYLSFVKRIISYVNPLSYI 14
           +RQALI+VP  + TSY   GS    +AT   ++GS N +  GY ++VKRI+SYVNPLSY 
Sbjct: 381 NRQALIVVPRQRATSYHQRGS-LSDRATTTTSSGSVNANDGGYFAYVKRILSYVNPLSYF 439

Query: 13  G 11
           G
Sbjct: 440 G 440


>ref|XP_002327944.1| predicted protein [Populus trichocarpa] gi|222837353|gb|EEE75732.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score =  157 bits (398), Expect = 3e-36
 Identities = 83/154 (53%), Positives = 104/154 (67%)
 Frame = -1

Query: 469 KSAVQADTFKESKNDTRALSLDKSDVHLNIRLPDCTYLQEKFSLISTLREVKSYVDENQG 290
           K A   D       D +      SDVHLNIRLPD   LQEKFS+ STLR VK YVD NQ 
Sbjct: 249 KKAESTDGLGPGTLDDKKTVTVSSDVHLNIRLPDGVSLQEKFSVTSTLRMVKDYVDRNQA 308

Query: 289 TSMRSYDLAIPYPRKVFGIEDLSKTLSELGLRDRQALILVPHSKVTSYRGEGSAFGHQAT 110
             + +YDLAIPYPRK F  +DLSK+LSEL L +RQAL++VPH + TSY   GS+   +AT
Sbjct: 309 GGIGAYDLAIPYPRKTFSDQDLSKSLSELALLNRQALMVVPHQRATSYHRGGSS-SDRAT 367

Query: 109 GINNTGSSNGSTEGYLSFVKRIISYVNPLSYIGS 8
              ++GS+N +  GY ++VKR++SYVNPLSY G+
Sbjct: 368 TTTSSGSANANDGGYFAYVKRVLSYVNPLSYFGA 401


>ref|XP_002268984.1| PREDICTED: uncharacterized protein LOC100244691 [Vitis vinifera]
          Length = 543

 Score =  154 bits (389), Expect = 3e-35
 Identities = 96/246 (39%), Positives = 139/246 (56%), Gaps = 9/246 (3%)
 Frame = -1

Query: 718 DNLNVGDSVSPA--QNIEHISGRAEQASPINVNE---LPDPVKLEPEDIVNRFKPINVGV 554
           +N+ VGD+ S       E  SG  EQ + +N      LP        +       +  G 
Sbjct: 197 ENIEVGDATSSKVLHANELDSGENEQPTSLNATAKELLPITADHNNSEGCPISPTVKDGC 256

Query: 553 ESPVQEKNLVDLRSEGSMVNSEEFVDEPKSAV---QADTFKESKNDTRALSLDKS-DVHL 386
             P +  N  +   E S  +S+    E   AV   + +  ++ K  T  +S +KS DVHL
Sbjct: 257 PVPEENSNFTNPHLEVSEGSSQSIPTEVNQAVVGTKTENVEDQKAGTLDISTNKSTDVHL 316

Query: 385 NIRLPDCTYLQEKFSLISTLREVKSYVDENQGTSMRSYDLAIPYPRKVFGIEDLSKTLSE 206
           NIRLP+   LQEKF + STL  VK +VD+NQ + + SYDLA+PYPRKVF  +DLSK+LS+
Sbjct: 317 NIRLPNGNSLQEKFPVTSTLSMVKDFVDQNQASGIGSYDLAVPYPRKVFKGQDLSKSLSD 376

Query: 205 LGLRDRQALILVPHSKVTSYRGEGSAFGHQATGINNTGSSNGSTEGYLSFVKRIISYVNP 26
           LGL +RQAL++VPH +  ++R   S+        N++GS+N S  GY + ++  +SY+NP
Sbjct: 377 LGLLNRQALMVVPHQRAVAHRRGVSSSRDLTNSTNDSGSANDSNGGYFALLRSFLSYLNP 436

Query: 25  LSYIGS 8
           LSY+GS
Sbjct: 437 LSYLGS 442


>emb|CBI39173.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score =  153 bits (387), Expect = 5e-35
 Identities = 96/245 (39%), Positives = 138/245 (56%), Gaps = 9/245 (3%)
 Frame = -1

Query: 715 NLNVGDSVSPA--QNIEHISGRAEQASPINVNE---LPDPVKLEPEDIVNRFKPINVGVE 551
           N+ VGD+ S       E  SG  EQ + +N      LP        +       +  G  
Sbjct: 197 NIEVGDATSSKVLHANELDSGENEQPTSLNATAKELLPITADHNNSEGCPISPTVKDGCP 256

Query: 550 SPVQEKNLVDLRSEGSMVNSEEFVDEPKSAV---QADTFKESKNDTRALSLDKS-DVHLN 383
            P +  N  +   E S  +S+    E   AV   + +  ++ K  T  +S +KS DVHLN
Sbjct: 257 VPEENSNFTNPHLEVSEGSSQSIPTEVNQAVVGTKTENVEDQKAGTLDISTNKSTDVHLN 316

Query: 382 IRLPDCTYLQEKFSLISTLREVKSYVDENQGTSMRSYDLAIPYPRKVFGIEDLSKTLSEL 203
           IRLP+   LQEKF + STL  VK +VD+NQ + + SYDLA+PYPRKVF  +DLSK+LS+L
Sbjct: 317 IRLPNGNSLQEKFPVTSTLSMVKDFVDQNQASGIGSYDLAVPYPRKVFKGQDLSKSLSDL 376

Query: 202 GLRDRQALILVPHSKVTSYRGEGSAFGHQATGINNTGSSNGSTEGYLSFVKRIISYVNPL 23
           GL +RQAL++VPH +  ++R   S+        N++GS+N S  GY + ++  +SY+NPL
Sbjct: 377 GLLNRQALMVVPHQRAVAHRRGVSSSRDLTNSTNDSGSANDSNGGYFALLRSFLSYLNPL 436

Query: 22  SYIGS 8
           SY+GS
Sbjct: 437 SYLGS 441


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