BLASTX nr result

ID: Bupleurum21_contig00004090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004090
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24060.3| unnamed protein product [Vitis vinifera]              116   1e-23
ref|XP_002265949.1| PREDICTED: uncharacterized protein LOC100244...   116   1e-23
ref|XP_004172869.1| PREDICTED: uncharacterized LOC101216928 [Cuc...    91   8e-16
ref|XP_004152859.1| PREDICTED: uncharacterized protein LOC101216...    91   8e-16
ref|XP_002331407.1| predicted protein [Populus trichocarpa] gi|2...    86   1e-14

>emb|CBI24060.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score =  116 bits (291), Expect = 1e-23
 Identities = 81/191 (42%), Positives = 103/191 (53%), Gaps = 16/191 (8%)
 Frame = +1

Query: 79  LNMAEMKGNKKRLPINLSFLSPNDKTQTQIFN-------TTKSSKKFEGAVVGLGIVAAM 237
           L M    G K RL +NLS  + + + ++Q+++       TTKS + FEG VVGLGIVAA+
Sbjct: 54  LQMESFSG-KGRLAMNLSLFTNSFEPKSQVWSLDSKVSSTTKSPRNFEGGVVGLGIVAAL 112

Query: 238 TELDHTHDPLKSN--RPGFLGF-SPRSNPIPIFGNTSDLNTGSDLGSN---LEDNMELSE 399
            +LD+TH+ L S   +   L   SPRSNPIPI      +        +   +E  ME+SE
Sbjct: 113 NDLDNTHESLSSKPCKASILAATSPRSNPIPIANRAKHMPKVEKCRPSSGMMEMEMEMSE 172

Query: 400 EYTCVISHIGNNLIKKREYFDGNLTSKCETTVTSGLFCAASPPVVTNVGDYAAKAV---F 570
            YTCVISH GNNLIKKR YFD       +   T      A P   T+   + A      F
Sbjct: 173 SYTCVISHCGNNLIKKRVYFDDKPNGVVDDITT------AVPISSTDAAYWVASEAAPPF 226

Query: 571 GTADFLSSCYL 603
            TADFLSSCYL
Sbjct: 227 KTADFLSSCYL 237


>ref|XP_002265949.1| PREDICTED: uncharacterized protein LOC100244902 isoform 1 [Vitis
           vinifera]
          Length = 267

 Score =  116 bits (291), Expect = 1e-23
 Identities = 81/191 (42%), Positives = 103/191 (53%), Gaps = 16/191 (8%)
 Frame = +1

Query: 79  LNMAEMKGNKKRLPINLSFLSPNDKTQTQIFN-------TTKSSKKFEGAVVGLGIVAAM 237
           L M    G K RL +NLS  + + + ++Q+++       TTKS + FEG VVGLGIVAA+
Sbjct: 18  LQMESFSG-KGRLAMNLSLFTNSFEPKSQVWSLDSKVSSTTKSPRNFEGGVVGLGIVAAL 76

Query: 238 TELDHTHDPLKSN--RPGFLGF-SPRSNPIPIFGNTSDLNTGSDLGSN---LEDNMELSE 399
            +LD+TH+ L S   +   L   SPRSNPIPI      +        +   +E  ME+SE
Sbjct: 77  NDLDNTHESLSSKPCKASILAATSPRSNPIPIANRAKHMPKVEKCRPSSGMMEMEMEMSE 136

Query: 400 EYTCVISHIGNNLIKKREYFDGNLTSKCETTVTSGLFCAASPPVVTNVGDYAAKAV---F 570
            YTCVISH GNNLIKKR YFD       +   T      A P   T+   + A      F
Sbjct: 137 SYTCVISHCGNNLIKKRVYFDDKPNGVVDDITT------AVPISSTDAAYWVASEAAPPF 190

Query: 571 GTADFLSSCYL 603
            TADFLSSCYL
Sbjct: 191 KTADFLSSCYL 201


>ref|XP_004172869.1| PREDICTED: uncharacterized LOC101216928 [Cucumis sativus]
          Length = 236

 Score = 90.5 bits (223), Expect = 8e-16
 Identities = 65/151 (43%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
 Frame = +1

Query: 178 TKSSKKFEGAVVGLGIVAAMTELDHTHDPLKSNRPGFLGFSPRSNPIPIFGNTSDLNTGS 357
           TKS + FE  VVGLGIVAAMT+ D  H+   S++      SPRS  IPI  +        
Sbjct: 29  TKSPRDFEKGVVGLGIVAAMTDSDKIHEAFVSSK----AVSPRSCSIPIVSSAKPAANFR 84

Query: 358 DLGSNLEDNM------ELSEEYTCVISHIGNNLIKKREYFDGNL---TSKCETTVTSGLF 510
             G NLE         ELSE YTCV SH GN L +KR YF+G L     +    V SG+F
Sbjct: 85  G-GFNLEKETLPEVVDELSESYTCVTSHFGNRLFEKRVYFNGELDLVNGRSSNIVRSGVF 143

Query: 511 CAASPPVVTNVGDYAAKAVFGTADFLSSCYL 603
             ++ P+   V    A+  F  A+FLSSCYL
Sbjct: 144 --STSPMSFGV----AERGFCAAEFLSSCYL 168


>ref|XP_004152859.1| PREDICTED: uncharacterized protein LOC101216928 [Cucumis sativus]
          Length = 234

 Score = 90.5 bits (223), Expect = 8e-16
 Identities = 65/151 (43%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
 Frame = +1

Query: 178 TKSSKKFEGAVVGLGIVAAMTELDHTHDPLKSNRPGFLGFSPRSNPIPIFGNTSDLNTGS 357
           TKS + FE  VVGLGIVAAMT+ D  H+   S++      SPRS  IPI  +        
Sbjct: 29  TKSPRDFEKGVVGLGIVAAMTDSDKIHEAFVSSK----AVSPRSCSIPIVSSAKPAANFR 84

Query: 358 DLGSNLEDNM------ELSEEYTCVISHIGNNLIKKREYFDGNL---TSKCETTVTSGLF 510
             G NLE         ELSE YTCV SH GN L +KR YF+G L     +    V SG+F
Sbjct: 85  G-GFNLEKETLPEVVDELSESYTCVTSHFGNRLFEKRVYFNGELDLVNGRSSNIVRSGVF 143

Query: 511 CAASPPVVTNVGDYAAKAVFGTADFLSSCYL 603
             ++ P+   V    A+  F  A+FLSSCYL
Sbjct: 144 --STSPMSFGV----AERGFCAAEFLSSCYL 168


>ref|XP_002331407.1| predicted protein [Populus trichocarpa] gi|222873621|gb|EEF10752.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 72/181 (39%), Positives = 92/181 (50%), Gaps = 15/181 (8%)
 Frame = +1

Query: 106 KKRLPINLSFLSPNDKTQTQIFN-TTKSSKKFE--GAVVGLGIVAAMTELDHTHDPLKSN 276
           KKR  I+LS  +    T T+ F+   KS + F+  G+ VGLGIVAAM E D   D     
Sbjct: 3   KKRPRISLSLFT----TLTETFSMANKSPRNFKNGGSAVGLGIVAAMDESDKVSD----- 53

Query: 277 RPGFLGFSPRSNPIPIFG---NTSDLNTGS------DLGSNLEDNMELSEEYTCVISHIG 429
                  SPRS+P+P+       S    G       D G  + D  E  E YTCVISH+G
Sbjct: 54  ----FALSPRSSPVPVVSLKKPASCFKEGGIGVWNFDKGGVVVD--ENDESYTCVISHVG 107

Query: 430 NNLIKKREYFDGN--LTSKCETTVTSGLFCAASPPVVTNVG-DYAAKAVFGTADFLSSCY 600
           NN+IKK  Y+D    + S     V SGL  AASP V+  +    A +  F + DFLSSC+
Sbjct: 108 NNVIKKSVYYDDKVCVDSVSWFDVGSGLLYAASPAVMMPIDVATAERREFWSKDFLSSCH 167

Query: 601 L 603
           L
Sbjct: 168 L 168


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