BLASTX nr result
ID: Bupleurum21_contig00004078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00004078
(700 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004135776.1| PREDICTED: uncharacterized protein LOC101207... 156 3e-36
emb|CBI22977.3| unnamed protein product [Vitis vinifera] 156 3e-36
ref|XP_002270635.1| PREDICTED: 60S ribosomal protein L18-2-like ... 155 6e-36
emb|CBI36879.3| unnamed protein product [Vitis vinifera] 155 1e-35
ref|XP_002271179.1| PREDICTED: 60S ribosomal protein L18-2-like ... 155 1e-35
>ref|XP_004135776.1| PREDICTED: uncharacterized protein LOC101207642 [Cucumis sativus]
gi|449524956|ref|XP_004169487.1| PREDICTED:
uncharacterized protein LOC101228164 [Cucumis sativus]
Length = 389
Score = 156 bits (395), Expect = 3e-36
Identities = 78/111 (70%), Positives = 90/111 (81%)
Frame = -1
Query: 700 YKNPKPPAPSKHLGFQPREEEEADVMGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRF 521
++NP +P P + A VMGIDL+AGGKSK+TKR AP+SDDIYLKL+VKLYRF
Sbjct: 178 FENPDSYSPLSSTPAAPADTRRAFVMGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRF 237
Query: 520 LVRRTGSKFNAVILKRLFMSKTNKPPISLSRLIRFMTGKEDKIAVIVGTVT 368
LVRRTGS FNAVILKRLFMSK NKPP+SLSRLI+F GKE KIAV+VGT+T
Sbjct: 238 LVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIQFTKGKESKIAVVVGTIT 288
Score = 130 bits (328), Expect = 2e-28
Identities = 61/66 (92%), Positives = 65/66 (98%)
Frame = -2
Query: 207 FDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARGRRN 28
FDQLALRAPLGQNTVLLRGPKNSREAVKHFG APGVPHSHSKPYVRSKGRKFE+ARG+RN
Sbjct: 324 FDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRN 383
Query: 27 SKGFRV 10
S+G+RV
Sbjct: 384 SRGYRV 389
>emb|CBI22977.3| unnamed protein product [Vitis vinifera]
Length = 254
Score = 156 bits (395), Expect = 3e-36
Identities = 78/89 (87%), Positives = 85/89 (95%)
Frame = -1
Query: 634 ADVMGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKT 455
A MGIDL+AGGKSK+TKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK
Sbjct: 65 AAAMGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKI 124
Query: 454 NKPPISLSRLIRFMTGKEDKIAVIVGTVT 368
NKPP+SLSRLIR+M GKEDKIAV+VGTVT
Sbjct: 125 NKPPMSLSRLIRYMQGKEDKIAVLVGTVT 153
Score = 133 bits (334), Expect = 4e-29
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = -2
Query: 207 FDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARGRRN 28
FDQLALRAPLGQNTVLLRGPKN+REAVKHFGKAPGVPHSH+KPYVRSKGRKFE+ARGRRN
Sbjct: 189 FDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRRN 248
Query: 27 SKGFRV 10
S+GFRV
Sbjct: 249 SRGFRV 254
>ref|XP_002270635.1| PREDICTED: 60S ribosomal protein L18-2-like [Vitis vinifera]
Length = 187
Score = 155 bits (393), Expect = 6e-36
Identities = 77/86 (89%), Positives = 84/86 (97%)
Frame = -1
Query: 625 MGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKTNKP 446
MGIDL+AGGKSK+TKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK NKP
Sbjct: 1 MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKINKP 60
Query: 445 PISLSRLIRFMTGKEDKIAVIVGTVT 368
P+SLSRLIR+M GKEDKIAV+VGTVT
Sbjct: 61 PMSLSRLIRYMQGKEDKIAVLVGTVT 86
Score = 133 bits (334), Expect = 4e-29
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = -2
Query: 207 FDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARGRRN 28
FDQLALRAPLGQNTVLLRGPKN+REAVKHFGKAPGVPHSH+KPYVRSKGRKFE+ARGRRN
Sbjct: 122 FDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRRN 181
Query: 27 SKGFRV 10
S+GFRV
Sbjct: 182 SRGFRV 187
>emb|CBI36879.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 155 bits (391), Expect = 1e-35
Identities = 76/86 (88%), Positives = 83/86 (96%)
Frame = -1
Query: 625 MGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKTNKP 446
MGIDL+AGGKSKRTKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK NKP
Sbjct: 111 MGIDLVAGGKSKRTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 170
Query: 445 PISLSRLIRFMTGKEDKIAVIVGTVT 368
P+SLSRL+R+M GKE KIAV+VGTVT
Sbjct: 171 PLSLSRLVRYMDGKEGKIAVVVGTVT 196
Score = 133 bits (334), Expect = 4e-29
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = -2
Query: 207 FDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARGRRN 28
FDQLALRAPLGQNTVLLRGPKN+REAVKHFGKAPGVPHSH+KPYVRSKGRKFE+ARGRRN
Sbjct: 232 FDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRRN 291
Query: 27 SKGFRV 10
S+GFRV
Sbjct: 292 SRGFRV 297
>ref|XP_002271179.1| PREDICTED: 60S ribosomal protein L18-2-like [Vitis vinifera]
Length = 187
Score = 155 bits (391), Expect = 1e-35
Identities = 76/86 (88%), Positives = 83/86 (96%)
Frame = -1
Query: 625 MGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKTNKP 446
MGIDL+AGGKSKRTKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK NKP
Sbjct: 1 MGIDLVAGGKSKRTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 60
Query: 445 PISLSRLIRFMTGKEDKIAVIVGTVT 368
P+SLSRL+R+M GKE KIAV+VGTVT
Sbjct: 61 PLSLSRLVRYMDGKEGKIAVVVGTVT 86
Score = 133 bits (334), Expect = 4e-29
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = -2
Query: 207 FDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARGRRN 28
FDQLALRAPLGQNTVLLRGPKN+REAVKHFGKAPGVPHSH+KPYVRSKGRKFE+ARGRRN
Sbjct: 122 FDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRRN 181
Query: 27 SKGFRV 10
S+GFRV
Sbjct: 182 SRGFRV 187