BLASTX nr result

ID: Bupleurum21_contig00004077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004077
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22977.3| unnamed protein product [Vitis vinifera]              348   2e-93
emb|CBI36879.3| unnamed protein product [Vitis vinifera]              347   2e-93
ref|XP_002271179.1| PREDICTED: 60S ribosomal protein L18-2-like ...   346   7e-93
ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259...   345   1e-92
emb|CBI39539.3| unnamed protein product [Vitis vinifera]              345   1e-92

>emb|CBI22977.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  348 bits (892), Expect = 2e-93
 Identities = 170/190 (89%), Positives = 186/190 (97%)
 Frame = -3

Query: 834 ASAMGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKT 655
           A+AMGIDL+AGGKSK+TKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK 
Sbjct: 65  AAAMGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKI 124

Query: 654 NKPPMSLSRLIRFMTGKEDKIAVIVGTITDDVRVHEIPCMKVTALRFTETARARIEKAGG 475
           NKPPMSLSRLIR+M GKEDKIAV+VGT+TDD+RV+E+P +KVTALRFTE ARARIEKAGG
Sbjct: 125 NKPPMSLSRLIRYMQGKEDKIAVLVGTVTDDLRVYEVPTLKVTALRFTERARARIEKAGG 184

Query: 474 ECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKAR 295
           ECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGKAPGVPHSH+KPYVRSKGRKFE+AR
Sbjct: 185 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERAR 244

Query: 294 GRRNSKGFRV 265
           GRRNS+GFRV
Sbjct: 245 GRRNSRGFRV 254


>emb|CBI36879.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  347 bits (891), Expect = 2e-93
 Identities = 168/188 (89%), Positives = 184/188 (97%)
 Frame = -3

Query: 828 AMGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKTNK 649
           AMGIDL+AGGKSKRTKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK NK
Sbjct: 110 AMGIDLVAGGKSKRTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNK 169

Query: 648 PPMSLSRLIRFMTGKEDKIAVIVGTITDDVRVHEIPCMKVTALRFTETARARIEKAGGEC 469
           PP+SLSRL+R+M GKE KIAV+VGT+TDD+RV+E+PC+KVTALRFTE ARARIEKAGGEC
Sbjct: 170 PPLSLSRLVRYMDGKEGKIAVVVGTVTDDLRVYEVPCLKVTALRFTERARARIEKAGGEC 229

Query: 468 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARGR 289
           LTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGKAPGVPHSH+KPYVRSKGRKFE+ARGR
Sbjct: 230 LTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGR 289

Query: 288 RNSKGFRV 265
           RNS+GFRV
Sbjct: 290 RNSRGFRV 297


>ref|XP_002271179.1| PREDICTED: 60S ribosomal protein L18-2-like [Vitis vinifera]
          Length = 187

 Score =  346 bits (887), Expect = 7e-93
 Identities = 167/187 (89%), Positives = 183/187 (97%)
 Frame = -3

Query: 825 MGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKTNKP 646
           MGIDL+AGGKSKRTKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK NKP
Sbjct: 1   MGIDLVAGGKSKRTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 60

Query: 645 PMSLSRLIRFMTGKEDKIAVIVGTITDDVRVHEIPCMKVTALRFTETARARIEKAGGECL 466
           P+SLSRL+R+M GKE KIAV+VGT+TDD+RV+E+PC+KVTALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVRYMDGKEGKIAVVVGTVTDDLRVYEVPCLKVTALRFTERARARIEKAGGECL 120

Query: 465 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARGRR 286
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGKAPGVPHSH+KPYVRSKGRKFE+ARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRR 180

Query: 285 NSKGFRV 265
           NS+GFRV
Sbjct: 181 NSRGFRV 187


>ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259659 [Vitis vinifera]
          Length = 429

 Score =  345 bits (885), Expect = 1e-92
 Identities = 167/187 (89%), Positives = 183/187 (97%)
 Frame = -3

Query: 825 MGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKTNKP 646
           MGIDL+AGGKSK+TKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK NKP
Sbjct: 243 MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 302

Query: 645 PMSLSRLIRFMTGKEDKIAVIVGTITDDVRVHEIPCMKVTALRFTETARARIEKAGGECL 466
           P+SLSRL+R+M GKE KIAV+VGT+TDD+RV+E+P +KVTALRFTETARARIEKAGGECL
Sbjct: 303 PLSLSRLVRYMGGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 362

Query: 465 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARGRR 286
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSH+KPYVRSKGRKFE+ARGRR
Sbjct: 363 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRR 422

Query: 285 NSKGFRV 265
           NS+GFRV
Sbjct: 423 NSRGFRV 429


>emb|CBI39539.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  345 bits (885), Expect = 1e-92
 Identities = 167/187 (89%), Positives = 183/187 (97%)
 Frame = -3

Query: 825 MGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKTNKP 646
           MGIDL+AGGKSK+TKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK NKP
Sbjct: 63  MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 122

Query: 645 PMSLSRLIRFMTGKEDKIAVIVGTITDDVRVHEIPCMKVTALRFTETARARIEKAGGECL 466
           P+SLSRL+R+M GKE KIAV+VGT+TDD+RV+E+P +KVTALRFTETARARIEKAGGECL
Sbjct: 123 PLSLSRLVRYMGGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 182

Query: 465 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARGRR 286
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSH+KPYVRSKGRKFE+ARGRR
Sbjct: 183 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRR 242

Query: 285 NSKGFRV 265
           NS+GFRV
Sbjct: 243 NSRGFRV 249


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