BLASTX nr result

ID: Bupleurum21_contig00004075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004075
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523537.1| structural constituent of ribosome, putative...   134   8e-30
emb|CBI25607.3| unnamed protein product [Vitis vinifera]              132   4e-29
ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256...   132   4e-29
ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
ref|XP_004171549.1| PREDICTED: 37S ribosomal protein MRP17, mito...   130   1e-28

>ref|XP_002523537.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223537244|gb|EEF38876.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 162

 Score =  134 bits (337), Expect = 8e-30
 Identities = 61/85 (71%), Positives = 75/85 (88%)
 Frame = +2

Query: 2   TELKSFGKQQLGYGIKKLDGRYYQGQLMQMTMMAPPSISKELHYLNKEDRLLRWLMVKHR 181
           T++KSFG  QLGYGIKK + RY+QGQLMQMTMMA P+I+KELHYLNKEDRLLRWL+VKHR
Sbjct: 38  TDMKSFGTIQLGYGIKKRENRYFQGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHR 97

Query: 182 DVKYGLDFLDDDSDRGGLSRLSTSR 256
           D KYGLDF+D++  +G L++LS S+
Sbjct: 98  DTKYGLDFMDENDGKGELNKLSPSK 122


>emb|CBI25607.3| unnamed protein product [Vitis vinifera]
          Length = 156

 Score =  132 bits (331), Expect = 4e-29
 Identities = 61/87 (70%), Positives = 74/87 (85%)
 Frame = +2

Query: 2   TELKSFGKQQLGYGIKKLDGRYYQGQLMQMTMMAPPSISKELHYLNKEDRLLRWLMVKHR 181
           T++KSFG  +LGYGIKKLDGRYYQGQLMQM+MMA P+ +KELHYLNKEDRLLRWL+VKHR
Sbjct: 32  TDIKSFGIVRLGYGIKKLDGRYYQGQLMQMSMMATPNFNKELHYLNKEDRLLRWLLVKHR 91

Query: 182 DVKYGLDFLDDDSDRGGLSRLSTSRIF 262
           + KYGL+FL++D  R  LS+   S +F
Sbjct: 92  NTKYGLEFLNEDDVRSELSKFPRSTLF 118


>ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256785 [Vitis vinifera]
          Length = 162

 Score =  132 bits (331), Expect = 4e-29
 Identities = 61/87 (70%), Positives = 74/87 (85%)
 Frame = +2

Query: 2   TELKSFGKQQLGYGIKKLDGRYYQGQLMQMTMMAPPSISKELHYLNKEDRLLRWLMVKHR 181
           T++KSFG  +LGYGIKKLDGRYYQGQLMQM+MMA P+ +KELHYLNKEDRLLRWL+VKHR
Sbjct: 38  TDIKSFGIVRLGYGIKKLDGRYYQGQLMQMSMMATPNFNKELHYLNKEDRLLRWLLVKHR 97

Query: 182 DVKYGLDFLDDDSDRGGLSRLSTSRIF 262
           + KYGL+FL++D  R  LS+   S +F
Sbjct: 98  NTKYGLEFLNEDDVRSELSKFPRSTLF 124


>ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|222866591|gb|EEF03722.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  131 bits (330), Expect = 5e-29
 Identities = 58/76 (76%), Positives = 71/76 (93%)
 Frame = +2

Query: 2   TELKSFGKQQLGYGIKKLDGRYYQGQLMQMTMMAPPSISKELHYLNKEDRLLRWLMVKHR 181
           T++KSFG  QLGYGIKKLDGR+YQGQLMQ+TMMA P+I+KELHYLNKEDRLLRWL+VKHR
Sbjct: 38  TDIKSFGTVQLGYGIKKLDGRHYQGQLMQITMMATPNINKELHYLNKEDRLLRWLLVKHR 97

Query: 182 DVKYGLDFLDDDSDRG 229
           D+K+GL+F+D+D + G
Sbjct: 98  DIKFGLEFMDEDDEDG 113


>ref|XP_004171549.1| PREDICTED: 37S ribosomal protein MRP17, mitochondrial-like [Cucumis
           sativus]
          Length = 153

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/81 (72%), Positives = 72/81 (88%)
 Frame = +2

Query: 5   ELKSFGKQQLGYGIKKLDGRYYQGQLMQMTMMAPPSISKELHYLNKEDRLLRWLMVKHRD 184
           ++KSFG  QLGYGIKKLDGRYYQGQLMQMTMMA P+++KEL YLNKEDRLLRW++VKHRD
Sbjct: 39  DIKSFGVVQLGYGIKKLDGRYYQGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRD 98

Query: 185 VKYGLDFLDDDSDRGGLSRLS 247
            ++GL+FL +D D+ GL +LS
Sbjct: 99  RQFGLEFLGEDDDKNGLEKLS 119


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