BLASTX nr result

ID: Bupleurum21_contig00004065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004065
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26023.3| unnamed protein product [Vitis vinifera]               60   5e-07
ref|XP_002269582.1| PREDICTED: uncharacterized protein LOC100242...    60   5e-07

>emb|CBI26023.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
 Frame = -1

Query: 247 MEFSGIVFRSIP----SVYQNSVSKSCVLGGGNEAGGMFSG--EIKKMGHQDLRVCVKPR 86
           ME SG+VFR +P    +      SKS   G   ++G   S   E++ +G +D RV V+PR
Sbjct: 1   MEVSGVVFRQVPFFSGAGIDTQSSKSSFSGVSVDSGNRISAFSELRLLGSRDSRVAVRPR 60

Query: 85  KLNGFCDDGHVEYYKSSKITRCGGVKEK 2
           K +GF D+ H++YY  S   RCG  K+K
Sbjct: 61  KPSGFRDESHLKYYYES--PRCGAKKDK 86


>ref|XP_002269582.1| PREDICTED: uncharacterized protein LOC100242564 [Vitis vinifera]
           gi|147865786|emb|CAN81152.1| hypothetical protein
           VITISV_020818 [Vitis vinifera]
          Length = 362

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
 Frame = -1

Query: 247 MEFSGIVFRSIP----SVYQNSVSKSCVLGGGNEAGGMFSG--EIKKMGHQDLRVCVKPR 86
           ME SG+VFR +P    +      SKS   G   ++G   S   E++ +G +D RV V+PR
Sbjct: 1   MEVSGVVFRQVPFFSGAGIDTQSSKSSFSGVSVDSGNRISAFSELRLLGSRDSRVAVRPR 60

Query: 85  KLNGFCDDGHVEYYKSSKITRCGGVKEK 2
           K +GF D+ H++YY  S   RCG  K+K
Sbjct: 61  KPSGFRDESHLKYYYES--PRCGAKKDK 86


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