BLASTX nr result

ID: Bupleurum21_contig00004045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004045
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140689.1| PREDICTED: cytochrome b-c1 complex subunit 6...   129   3e-28
ref|XP_003531564.1| PREDICTED: cytochrome b-c1 complex subunit 6...   126   2e-27
ref|XP_002307493.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|NP_172964.1| Ubiquinol-cytochrome C reductase hinge protein ...   125   5e-27
ref|XP_003547586.1| PREDICTED: cytochrome b-c1 complex subunit 6...   125   5e-27

>ref|XP_004140689.1| PREDICTED: cytochrome b-c1 complex subunit 6-like [Cucumis sativus]
           gi|449528698|ref|XP_004171340.1| PREDICTED: cytochrome
           b-c1 complex subunit 6-like [Cucumis sativus]
          Length = 69

 Score =  129 bits (324), Expect = 3e-28
 Identities = 56/69 (81%), Positives = 60/69 (86%)
 Frame = -1

Query: 534 MADEEPVDQKKLLEESCKPKCVKTLLAYNACADRISGDESGHKHCTGQYFDYWQCIDKCV 355
           MADEEPVDQK+ LEE+CKPKCVK LL Y AC  RI GD+SGHKHCTGQYFDYW CIDKCV
Sbjct: 1   MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60

Query: 354 APKLLVELK 328
           APKLL +LK
Sbjct: 61  APKLLTKLK 69


>ref|XP_003531564.1| PREDICTED: cytochrome b-c1 complex subunit 6 [Glycine max]
           gi|255628593|gb|ACU14641.1| unknown [Glycine max]
          Length = 69

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/69 (81%), Positives = 58/69 (84%)
 Frame = -1

Query: 534 MADEEPVDQKKLLEESCKPKCVKTLLAYNACADRISGDESGHKHCTGQYFDYWQCIDKCV 355
           MADEEPVDQK+ LEESCKPKCVK LL Y AC  RI GDESG KHCTGQYFDYW CIDKCV
Sbjct: 1   MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDESGQKHCTGQYFDYWSCIDKCV 60

Query: 354 APKLLVELK 328
           APKL  +LK
Sbjct: 61  APKLFTKLK 69


>ref|XP_002307493.1| predicted protein [Populus trichocarpa] gi|222856942|gb|EEE94489.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score =  126 bits (316), Expect = 2e-27
 Identities = 54/69 (78%), Positives = 58/69 (84%)
 Frame = -1

Query: 534 MADEEPVDQKKLLEESCKPKCVKTLLAYNACADRISGDESGHKHCTGQYFDYWQCIDKCV 355
           MADEEPVD KK LEE+CKPKCV+ LL Y AC  RI GDESGHKHCTGQYFDYW C+DKCV
Sbjct: 1   MADEEPVDPKKYLEEACKPKCVRPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCV 60

Query: 354 APKLLVELK 328
           APKL  +LK
Sbjct: 61  APKLFTKLK 69


>ref|NP_172964.1| Ubiquinol-cytochrome C reductase hinge protein [Arabidopsis
           thaliana] gi|110740918|dbj|BAE98555.1|
           ubiquinol-cytochrome-c reductase like protein
           [Arabidopsis thaliana] gi|114050691|gb|ABI49495.1|
           At1g15120 [Arabidopsis thaliana]
           gi|227204459|dbj|BAH57081.1| AT1G15120 [Arabidopsis
           thaliana] gi|332191146|gb|AEE29267.1|
           Ubiquinol-cytochrome C reductase hinge protein
           [Arabidopsis thaliana]
          Length = 69

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/69 (79%), Positives = 58/69 (84%)
 Frame = -1

Query: 534 MADEEPVDQKKLLEESCKPKCVKTLLAYNACADRISGDESGHKHCTGQYFDYWQCIDKCV 355
           MAD+E VD KK LEESCKPKCVK LL Y AC  RI GD+SGHKHCTGQYFDYWQCIDKCV
Sbjct: 1   MADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWQCIDKCV 60

Query: 354 APKLLVELK 328
           APKL  +LK
Sbjct: 61  APKLFAKLK 69


>ref|XP_003547586.1| PREDICTED: cytochrome b-c1 complex subunit 6 [Glycine max]
           gi|255630456|gb|ACU15586.1| unknown [Glycine max]
          Length = 69

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/69 (79%), Positives = 58/69 (84%)
 Frame = -1

Query: 534 MADEEPVDQKKLLEESCKPKCVKTLLAYNACADRISGDESGHKHCTGQYFDYWQCIDKCV 355
           MADEEPVDQK+ LEESCKPKCVK LL Y AC  RI GD+SG KHCTGQYFDYW CIDKCV
Sbjct: 1   MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDDSGQKHCTGQYFDYWSCIDKCV 60

Query: 354 APKLLVELK 328
           APKL  +LK
Sbjct: 61  APKLFTKLK 69


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