BLASTX nr result

ID: Bupleurum21_contig00004025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004025
         (1565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40788.3| unnamed protein product [Vitis vinifera]              251   4e-64
ref|XP_002273784.1| PREDICTED: squamosa promoter-binding-like pr...   251   4e-64
ref|XP_002307005.1| predicted protein [Populus trichocarpa] gi|2...   242   2e-61
ref|XP_002510746.1| Squamosa promoter-binding protein, putative ...   236   2e-59
ref|XP_004172805.1| PREDICTED: LOW QUALITY PROTEIN: squamosa pro...   233   1e-58

>emb|CBI40788.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  251 bits (641), Expect = 4e-64
 Identities = 133/212 (62%), Positives = 153/212 (72%), Gaps = 5/212 (2%)
 Frame = -3

Query: 1179 NYPKCQVDDCKEDLSTAKDYHRRHKVCEVHSKATKAVVGKQMQRFCQQCSRFHPLSEFDE 1000
            +YP CQVD+C+EDLS AKDYHRRHKVCE+HSK+TKA+VGKQMQRFCQQCSRFHPLSEFDE
Sbjct: 118  SYPMCQVDNCREDLSNAKDYHRRHKVCEMHSKSTKALVGKQMQRFCQQCSRFHPLSEFDE 177

Query: 999  GKRSCXXXXXXXXXXXRKTQPDDVSSK-LPPGNRENVSNGDMDIVNLLAILARAQGN--X 829
            GKRSC           RKTQP+DVSS+ L PGNR+N  N ++DIVNLL  LAR QGN   
Sbjct: 178  GKRSCRRRLAGHNRRRRKTQPEDVSSRLLLPGNRDNTGNRNLDIVNLLTALARTQGNNEV 237

Query: 828  XXXXXXXXXSKDQLIQILQKINSLPLPADIAAKLPPSGVTNKTVPHQAQNE--NKQKGND 655
                      +DQLIQIL K+NSLPLPAD AAKLP SG  N+  P Q+ +E  N+  G  
Sbjct: 238  KSANNSSVPDRDQLIQILSKLNSLPLPADFAAKLPISGSLNRNTPGQSSSEHQNRLNGKT 297

Query: 654  SPSSTLDLLAVLSGTRVGSSPDAAAIPCQRNS 559
            S  ST+DLLAVLS T   S+PDA A   QR+S
Sbjct: 298  SSPSTMDLLAVLSATLAASAPDALAFLSQRSS 329


>ref|XP_002273784.1| PREDICTED: squamosa promoter-binding-like protein 14-like [Vitis
            vinifera]
          Length = 1070

 Score =  251 bits (641), Expect = 4e-64
 Identities = 133/212 (62%), Positives = 153/212 (72%), Gaps = 5/212 (2%)
 Frame = -3

Query: 1179 NYPKCQVDDCKEDLSTAKDYHRRHKVCEVHSKATKAVVGKQMQRFCQQCSRFHPLSEFDE 1000
            +YP CQVD+C+EDLS AKDYHRRHKVCE+HSK+TKA+VGKQMQRFCQQCSRFHPLSEFDE
Sbjct: 146  SYPMCQVDNCREDLSNAKDYHRRHKVCEMHSKSTKALVGKQMQRFCQQCSRFHPLSEFDE 205

Query: 999  GKRSCXXXXXXXXXXXRKTQPDDVSSK-LPPGNRENVSNGDMDIVNLLAILARAQGN--X 829
            GKRSC           RKTQP+DVSS+ L PGNR+N  N ++DIVNLL  LAR QGN   
Sbjct: 206  GKRSCRRRLAGHNRRRRKTQPEDVSSRLLLPGNRDNTGNRNLDIVNLLTALARTQGNNEV 265

Query: 828  XXXXXXXXXSKDQLIQILQKINSLPLPADIAAKLPPSGVTNKTVPHQAQNE--NKQKGND 655
                      +DQLIQIL K+NSLPLPAD AAKLP SG  N+  P Q+ +E  N+  G  
Sbjct: 266  KSANNSSVPDRDQLIQILSKLNSLPLPADFAAKLPISGSLNRNTPGQSSSEHQNRLNGKT 325

Query: 654  SPSSTLDLLAVLSGTRVGSSPDAAAIPCQRNS 559
            S  ST+DLLAVLS T   S+PDA A   QR+S
Sbjct: 326  SSPSTMDLLAVLSATLAASAPDALAFLSQRSS 357



 Score =  140 bits (354), Expect = 7e-31
 Identities = 82/141 (58%), Positives = 94/141 (66%)
 Frame = -1

Query: 425 GERSSTSYQSPAEYSDGHVQDVCTNLPLQLFSSSPENDSPPKLASSRKYFSSGXXXXXXX 246
           GERSSTSYQSP E SD  VQ+   NLPLQLFSSS E+DSPPKL S+RKYFSS        
Sbjct: 391 GERSSTSYQSPMEDSDCQVQETQPNLPLQLFSSSLEDDSPPKLGSARKYFSSDSSNPMEE 450

Query: 245 XXXXXXXPFVQKLFPTDSAREALKPGSTSNGIEVTRNAKAGRNQGCSTSLDLFGGANRCV 66
                  P VQKLFP  ++ E +KP   S   EV  N  AGR  G +TSL+LF  ++R  
Sbjct: 451 RSPSSSPPVVQKLFPMQASMETVKPERMSISGEVNGNIGAGRAHG-ATSLELFRRSDRGA 509

Query: 65  ENTSVQSFPYQAGYTSSSGSD 3
           +N +VQSFPYQAGYTSSSGSD
Sbjct: 510 DNGAVQSFPYQAGYTSSSGSD 530



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 31/70 (44%), Positives = 49/70 (70%)
 Frame = -1

Query: 1532 FQESRDHWNPKGWDWDSARFLAKPLDSDGTRGGPSASVQSGVQRSRDDERVAANSMALRR 1353
            FQ  RD+WNPK WDWDS RF+A PL+S+  R G +  VQ+ +++ ++   +   + AL++
Sbjct: 49   FQNPRDNWNPKVWDWDSVRFVANPLESELLRLGTATPVQTELKKKQEGTGI---TTALKK 105

Query: 1352 DPMVEDDENL 1323
            +P+ EDDE+L
Sbjct: 106  NPVDEDDESL 115


>ref|XP_002307005.1| predicted protein [Populus trichocarpa] gi|222856454|gb|EEE94001.1|
            predicted protein [Populus trichocarpa]
          Length = 603

 Score =  242 bits (618), Expect = 2e-61
 Identities = 132/213 (61%), Positives = 155/213 (72%), Gaps = 5/213 (2%)
 Frame = -3

Query: 1182 GNYPKCQVDDCKEDLSTAKDYHRRHKVCEVHSKATKAVVGKQMQRFCQQCSRFHPLSEFD 1003
            G+YP CQVD+CKE+L+TAKDYHRRHKVCEVHSKATKA+VGKQMQRFCQQCSRFHPL+EFD
Sbjct: 140  GSYPMCQVDNCKENLTTAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHPLTEFD 199

Query: 1002 EGKRSCXXXXXXXXXXXRKTQPDDVSSK-LPPGNRENVSNGDMDIVNLLAILARAQG--N 832
            EGKRSC           RKTQP+DV+S+ L PGN++  SNG++DIVNLL  LAR+QG  +
Sbjct: 200  EGKRSCRRRLAGHNRRRRKTQPEDVTSRLLVPGNQDINSNGNLDIVNLLTALARSQGRAD 259

Query: 831  XXXXXXXXXXSKDQLIQILQKINSLPLPADIAAKLPPSGVTNKTVPHQ--AQNENKQKGN 658
                       KDQLIQIL KINSLPLP D+AAKL      N   P Q  + ++N+  G 
Sbjct: 260  DKSTTCTTVPDKDQLIQILSKINSLPLPMDLAAKLSNIASLNGKNPDQPSSAHQNRLHGT 319

Query: 657  DSPSSTLDLLAVLSGTRVGSSPDAAAIPCQRNS 559
             S SST+DLLAVLS T   S+PDA AI  QR+S
Sbjct: 320  ASSSSTVDLLAVLSATLAASAPDALAILSQRSS 352



 Score =  134 bits (337), Expect = 7e-29
 Identities = 74/141 (52%), Positives = 85/141 (60%)
 Frame = -1

Query: 425 GERSSTSYQSPAEYSDGHVQDVCTNLPLQLFSSSPENDSPPKLASSRKYFSSGXXXXXXX 246
           GER S  Y+SP E SD  +Q+   N PLQLFSSSPENDSPPKLASSRKYFSS        
Sbjct: 386 GERVSYCYESPVEDSDCQIQESRPNFPLQLFSSSPENDSPPKLASSRKYFSSDSSNPIED 445

Query: 245 XXXXXXXPFVQKLFPTDSAREALKPGSTSNGIEVTRNAKAGRNQGCSTSLDLFGGANRCV 66
                  P  QKLFP  S  E +K    S   EV  N +  R+  C   L+LF G+NR  
Sbjct: 446 RSPSSSPPVAQKLFPLQSTAETMKSEKMSISREVNANVEGSRSHACVLPLELFRGSNREP 505

Query: 65  ENTSVQSFPYQAGYTSSSGSD 3
           ++ S Q+FPYQ GYTSSSGSD
Sbjct: 506 DHGSFQNFPYQGGYTSSSGSD 526


>ref|XP_002510746.1| Squamosa promoter-binding protein, putative [Ricinus communis]
            gi|223551447|gb|EEF52933.1| Squamosa promoter-binding
            protein, putative [Ricinus communis]
          Length = 1073

 Score =  236 bits (601), Expect = 2e-59
 Identities = 126/211 (59%), Positives = 150/211 (71%), Gaps = 5/211 (2%)
 Frame = -3

Query: 1176 YPKCQVDDCKEDLSTAKDYHRRHKVCEVHSKATKAVVGKQMQRFCQQCSRFHPLSEFDEG 997
            YP CQVD+CKEDLS AKDYHRRHKVCE+HSK+T+A+VGKQMQRFCQQCSRFHPLSEFDEG
Sbjct: 146  YPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTQALVGKQMQRFCQQCSRFHPLSEFDEG 205

Query: 996  KRSCXXXXXXXXXXXRKTQPDDVSSK-LPPGNRENVSNGDMDIVNLLAILARAQGN--XX 826
            KRSC           RKTQP+DV+S+ L PGNR+  S+ ++DIVNLL  LAR QG     
Sbjct: 206  KRSCRRRLAGHNRRRRKTQPEDVTSRLLLPGNRDTASSANLDIVNLLTALARTQGKHADK 265

Query: 825  XXXXXXXXSKDQLIQILQKINSLPLPADIAAKLPPSGVTNKTVPHQ--AQNENKQKGNDS 652
                     +DQLIQIL KINSLPLP D+AA+L   G  N+  P Q  ++++N+  G  S
Sbjct: 266  RINASSMPDRDQLIQILSKINSLPLPMDLAAQLSNIGSLNRKNPEQPSSEHQNRLLGTAS 325

Query: 651  PSSTLDLLAVLSGTRVGSSPDAAAIPCQRNS 559
              ST+DLLAVLS T   S+PDA A   QR+S
Sbjct: 326  SPSTMDLLAVLSATLAASAPDALAFLSQRSS 356



 Score =  126 bits (316), Expect = 2e-26
 Identities = 72/140 (51%), Positives = 85/140 (60%)
 Frame = -1

Query: 422 ERSSTSYQSPAEYSDGHVQDVCTNLPLQLFSSSPENDSPPKLASSRKYFSSGXXXXXXXX 243
           E+SS+ YQSP E SD  +Q+   NLPLQLFSSSPE  SPPKLASSRKYFSS         
Sbjct: 391 EKSSSCYQSPVEESDCQLQESHPNLPLQLFSSSPEESSPPKLASSRKYFSSDSSNPSEGR 450

Query: 242 XXXXXXPFVQKLFPTDSAREALKPGSTSNGIEVTRNAKAGRNQGCSTSLDLFGGANRCVE 63
                 P +QKLFP  S  + +K    S   EV  N +  R+ G    L+LF G++    
Sbjct: 451 SPSSSPPVMQKLFPLQSNADTVKSEKVSITREVNANIEGSRSHGSILPLELFRGSDGRAV 510

Query: 62  NTSVQSFPYQAGYTSSSGSD 3
            +S QSFPYQAGYTSSSGSD
Sbjct: 511 QSSYQSFPYQAGYTSSSGSD 530


>ref|XP_004172805.1| PREDICTED: LOW QUALITY PROTEIN: squamosa promoter-binding-like
            protein 14-like [Cucumis sativus]
          Length = 1031

 Score =  233 bits (594), Expect = 1e-58
 Identities = 126/211 (59%), Positives = 150/211 (71%), Gaps = 5/211 (2%)
 Frame = -3

Query: 1176 YPKCQVDDCKEDLSTAKDYHRRHKVCEVHSKATKAVVGKQMQRFCQQCSRFHPLSEFDEG 997
            YP CQVD+CKEDLS AKDYHRRHKVCE+HSK++KA+V KQMQRFCQQCSRFHPLSEFD+G
Sbjct: 107  YPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSSKALVAKQMQRFCQQCSRFHPLSEFDDG 166

Query: 996  KRSCXXXXXXXXXXXRKTQPDDVSSKLP-PGNRENVSNGDMDIVNLLAILARAQG--NXX 826
            KRSC           RKTQP+DV+S+L  PG+R   S G++DIV+LL +LARAQG     
Sbjct: 167  KRSCRRRLAGHNWRRRKTQPEDVTSRLTRPGSRGPPSTGNLDIVSLLTVLARAQGKNEDQ 226

Query: 825  XXXXXXXXSKDQLIQILQKINSLPLPADIAAKLPPSGVTNKTVPHQA--QNENKQKGNDS 652
                    + DQLIQIL KINSLPLPAD+AAKLP         P Q+  Q++NK  GN S
Sbjct: 227  SVKSLLSANSDQLIQILNKINSLPLPADLAAKLPNLENFKGKAPPQSSLQHQNKLNGNPS 286

Query: 651  PSSTLDLLAVLSGTRVGSSPDAAAIPCQRNS 559
              ST+DLL VLS T   S+PDA A+  Q++S
Sbjct: 287  SPSTMDLLTVLSATLAASAPDALAMLSQKSS 317



 Score = 98.6 bits (244), Expect = 4e-18
 Identities = 66/146 (45%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
 Frame = -1

Query: 425 GERSSTSYQSPAEYSDGHVQDVCTNLPLQLFSSSPENDSPPKLASSRKYFSSGXXXXXXX 246
           GERSSTSYQSP E SDG VQ     LPLQLF SSPE+D+PP L +SRKYFSS        
Sbjct: 347 GERSSTSYQSPMEDSDGQVQGTRVGLPLQLFGSSPEHDAPPNLTASRKYFSSDSSNPIEE 406

Query: 245 XXXXXXXPFVQKLFPTDSAREALKPGSTS-----NGIEVTRNAKAGRNQGCSTSLDLFGG 81
                  P +Q LFP  S  E    G        NG+EV +   +      +   +LF  
Sbjct: 407 RSPSSSPPLLQTLFPVQSTEETTSNGKMPIRKEVNGVEVRKPPSS------NIPFELFRE 460

Query: 80  ANRCVENTSVQSFPYQAGYTSSSGSD 3
            +    N S Q+  YQAGYT SSGSD
Sbjct: 461 LDGARPN-SFQTIHYQAGYT-SSGSD 484


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