BLASTX nr result

ID: Bupleurum21_contig00004004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004004
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316547.1| predicted protein [Populus trichocarpa] gi|2...   254   5e-66
ref|XP_002518452.1| peroxisomal membrane protein 2, pxmp2, putat...   253   1e-65
ref|XP_002269336.1| PREDICTED: peroxisomal membrane protein PMP2...   253   1e-65
ref|NP_001237804.1| uncharacterized protein LOC100499909 [Glycin...   245   3e-63
ref|XP_003534581.1| PREDICTED: peroxisomal membrane protein PMP2...   241   4e-62

>ref|XP_002316547.1| predicted protein [Populus trichocarpa] gi|222859612|gb|EEE97159.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  254 bits (649), Expect = 5e-66
 Identities = 116/165 (70%), Positives = 139/165 (84%)
 Frame = -1

Query: 510 LLQLQQHPLRTKAITAGVLSAISDIASQKITGIXXXXXXXXXXKVLFGVVYLGPFGHYFH 331
           +LQLQQHPLRTKAITAGVLSA+SDI SQK++GI          KVLFG  YLGPFGHY H
Sbjct: 13  MLQLQQHPLRTKAITAGVLSALSDIVSQKLSGIQKLQIKRILLKVLFGFGYLGPFGHYLH 72

Query: 330 ILLDKIFKGKKDPSTVGKKVLVEQLTSSPWNNMLFMIYYGSIIEGRPWNQVKSKIRKEYP 151
           ILLDK+FKGKKD +TV KKV VEQLT+SPWNN++FM+YYG +I+GRPW QVK+K++KEYP
Sbjct: 73  ILLDKLFKGKKDTTTVAKKVAVEQLTASPWNNLVFMVYYGMVIDGRPWLQVKTKLKKEYP 132

Query: 150 TVQYASWTFWPVLGWINHQHVPLQFRVIAHSAVACLWGIFLSVRA 16
            VQ+ SWTFWPV+GW+NHQ++P QFRVI HS +A  WGIFL++RA
Sbjct: 133 AVQFTSWTFWPVVGWVNHQYIPQQFRVIFHSLIAVGWGIFLNLRA 177


>ref|XP_002518452.1| peroxisomal membrane protein 2, pxmp2, putative [Ricinus communis]
           gi|223542297|gb|EEF43839.1| peroxisomal membrane protein
           2, pxmp2, putative [Ricinus communis]
          Length = 185

 Score =  253 bits (646), Expect = 1e-65
 Identities = 120/165 (72%), Positives = 134/165 (81%)
 Frame = -1

Query: 510 LLQLQQHPLRTKAITAGVLSAISDIASQKITGIXXXXXXXXXXKVLFGVVYLGPFGHYFH 331
           LLQLQ HPLRTKAITAG LSA+SDI +QKI+GI          KVLFG  YLGPFGH+ H
Sbjct: 13  LLQLQHHPLRTKAITAGFLSAVSDIIAQKISGIQKLQLRRLLLKVLFGSAYLGPFGHFLH 72

Query: 330 ILLDKIFKGKKDPSTVGKKVLVEQLTSSPWNNMLFMIYYGSIIEGRPWNQVKSKIRKEYP 151
           I+LDKIFKGKKD  TV KKV+VEQLTSSPWNNMLFMIYYG I+E RPW  VK++I+KEYP
Sbjct: 73  IILDKIFKGKKDTKTVAKKVVVEQLTSSPWNNMLFMIYYGVIVERRPWMHVKARIKKEYP 132

Query: 150 TVQYASWTFWPVLGWINHQHVPLQFRVIAHSAVACLWGIFLSVRA 16
            VQ  SWTFWPV+GWINHQ+VPLQ RVI H  VAC WGIFL++RA
Sbjct: 133 KVQLTSWTFWPVVGWINHQYVPLQLRVIFHMVVACFWGIFLNLRA 177


>ref|XP_002269336.1| PREDICTED: peroxisomal membrane protein PMP22 [Vitis vinifera]
           gi|147836521|emb|CAN70890.1| hypothetical protein
           VITISV_000480 [Vitis vinifera]
          Length = 185

 Score =  253 bits (645), Expect = 1e-65
 Identities = 115/165 (69%), Positives = 137/165 (83%)
 Frame = -1

Query: 510 LLQLQQHPLRTKAITAGVLSAISDIASQKITGIXXXXXXXXXXKVLFGVVYLGPFGHYFH 331
           LLQLQ HPLRTKAITA VLSA+SDI SQK++GI          KVL G VYLGPFGH+ H
Sbjct: 13  LLQLQHHPLRTKAITAAVLSAVSDIVSQKLSGIQKLQLKRLLLKVLLGFVYLGPFGHFLH 72

Query: 330 ILLDKIFKGKKDPSTVGKKVLVEQLTSSPWNNMLFMIYYGSIIEGRPWNQVKSKIRKEYP 151
           ILLDK+FKGKKD  TV KKV++EQLT+SPWNN +FM+YYG +IEGR W+QVK+KI+K+YP
Sbjct: 73  ILLDKLFKGKKDSKTVAKKVVLEQLTASPWNNFVFMVYYGLVIEGRNWSQVKTKIKKDYP 132

Query: 150 TVQYASWTFWPVLGWINHQHVPLQFRVIAHSAVACLWGIFLSVRA 16
            VQY SWTFWPV+GW+NHQ+VPLQ RVI HS +AC WGIFL+++A
Sbjct: 133 AVQYTSWTFWPVVGWVNHQYVPLQLRVIFHSVIACAWGIFLNLQA 177


>ref|NP_001237804.1| uncharacterized protein LOC100499909 [Glycine max]
           gi|255627583|gb|ACU14136.1| unknown [Glycine max]
          Length = 185

 Score =  245 bits (625), Expect = 3e-63
 Identities = 109/163 (66%), Positives = 134/163 (82%)
 Frame = -1

Query: 504 QLQQHPLRTKAITAGVLSAISDIASQKITGIXXXXXXXXXXKVLFGVVYLGPFGHYFHIL 325
           QLQQHPLRTK ITAGVLSAISD+ SQK+TGI          KV+FG  YLGPFGH+FH++
Sbjct: 15  QLQQHPLRTKVITAGVLSAISDVVSQKLTGIQKLQLKRLLFKVIFGAAYLGPFGHFFHLI 74

Query: 324 LDKIFKGKKDPSTVGKKVLVEQLTSSPWNNMLFMIYYGSIIEGRPWNQVKSKIRKEYPTV 145
           LDKIFKGK+D  TV KKVL+EQLTS+PWNN+LFMIYYG ++EG+PW  VK+K++K+YP+V
Sbjct: 75  LDKIFKGKRDSKTVAKKVLIEQLTSNPWNNLLFMIYYGLVVEGQPWVNVKAKVKKDYPSV 134

Query: 144 QYASWTFWPVLGWINHQHVPLQFRVIAHSAVACLWGIFLSVRA 16
           QY SWT WPV+GWINH+ +PL FRV+  S VA  WG+FL++RA
Sbjct: 135 QYTSWTVWPVVGWINHKFMPLHFRVVFQSLVAFFWGVFLNLRA 177


>ref|XP_003534581.1| PREDICTED: peroxisomal membrane protein PMP22-like [Glycine max]
          Length = 185

 Score =  241 bits (615), Expect = 4e-62
 Identities = 108/163 (66%), Positives = 133/163 (81%)
 Frame = -1

Query: 504 QLQQHPLRTKAITAGVLSAISDIASQKITGIXXXXXXXXXXKVLFGVVYLGPFGHYFHIL 325
           QLQQHPLRTK ITAGVLSAISD+ SQK+TGI          KV+FG  YLGPFGH+FH++
Sbjct: 15  QLQQHPLRTKVITAGVLSAISDVVSQKLTGIQKIQLKRLLFKVIFGAAYLGPFGHFFHLI 74

Query: 324 LDKIFKGKKDPSTVGKKVLVEQLTSSPWNNMLFMIYYGSIIEGRPWNQVKSKIRKEYPTV 145
           LDKIFKGK+D  TV KKVL+EQLTS+PWNN+LFMIYYG ++EG+PW  VK+K++K+Y +V
Sbjct: 75  LDKIFKGKRDSKTVAKKVLIEQLTSNPWNNLLFMIYYGLVVEGQPWVNVKAKVKKDYLSV 134

Query: 144 QYASWTFWPVLGWINHQHVPLQFRVIAHSAVACLWGIFLSVRA 16
           QY SWT WPV+GWINH+ +PL FRV+  S VA  WG+FL++RA
Sbjct: 135 QYTSWTVWPVVGWINHKFMPLHFRVVFQSLVAFFWGVFLNLRA 177


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