BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003494
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloropl...   197   1e-48
emb|CBI23087.3| unnamed protein product [Vitis vinifera]              197   1e-48
gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum]      197   2e-48
ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, ch...   194   1e-47
ref|NP_001233834.1| chloroplast-specific ribosomal protein [Sola...   194   1e-47

>ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Vitis
           vinifera]
          Length = 298

 Score =  197 bits (502), Expect = 1e-48
 Identities = 95/127 (74%), Positives = 109/127 (85%)
 Frame = +3

Query: 294 LSDNIKGHVEDKVGKAIQKHSHLVREVDVRLSVRGGEFGKGPKVRRSEVTLFTKKHGVIR 473
           L+D ++ HVE+KVGKA+QKHSHLVREVDVRLS+RGGE GKGPK+RR EVTLFTKKHGV+R
Sbjct: 89  LTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGKGPKIRRCEVTLFTKKHGVVR 148

Query: 474 AEVDAETMYASIDAVSSVIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEAMLLQNGSTSS 653
           AE  AET+Y SID VSS+IQRKLRKIKEKDSDHGRHMKGF+RLKVRDPE  L++  +   
Sbjct: 149 AEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPLVEEEADVV 208

Query: 654 AQDEDDD 674
            Q ED D
Sbjct: 209 PQKEDGD 215


>emb|CBI23087.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  197 bits (502), Expect = 1e-48
 Identities = 95/127 (74%), Positives = 109/127 (85%)
 Frame = +3

Query: 294 LSDNIKGHVEDKVGKAIQKHSHLVREVDVRLSVRGGEFGKGPKVRRSEVTLFTKKHGVIR 473
           L+D ++ HVE+KVGKA+QKHSHLVREVDVRLS+RGGE GKGPK+RR EVTLFTKKHGV+R
Sbjct: 21  LTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGKGPKIRRCEVTLFTKKHGVVR 80

Query: 474 AEVDAETMYASIDAVSSVIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEAMLLQNGSTSS 653
           AE  AET+Y SID VSS+IQRKLRKIKEKDSDHGRHMKGF+RLKVRDPE  L++  +   
Sbjct: 81  AEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPLVEEEADVV 140

Query: 654 AQDEDDD 674
            Q ED D
Sbjct: 141 PQKEDGD 147


>gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum]
          Length = 280

 Score =  197 bits (500), Expect = 2e-48
 Identities = 95/129 (73%), Positives = 112/129 (86%)
 Frame = +3

Query: 294 LSDNIKGHVEDKVGKAIQKHSHLVREVDVRLSVRGGEFGKGPKVRRSEVTLFTKKHGVIR 473
           L+  +K +VE+K+GKA+QKHSHL REVDVRLSVRGGE GKGPK+RR EVTLFTKKHGVIR
Sbjct: 68  LTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIR 127

Query: 474 AEVDAETMYASIDAVSSVIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEAMLLQNGSTSS 653
           AE DAE++Y SID VSS+IQRKLRKIKEKDSDHGRHMKGFDRLKVRDPE +L+Q    + 
Sbjct: 128 AEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEVLLVQEDLETL 187

Query: 654 AQDEDDDDE 680
            Q+E+ +D+
Sbjct: 188 PQEEEVEDD 196


>ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor,
           putative [Ricinus communis] gi|223536311|gb|EEF37962.1|
           Plastid-specific 30S ribosomal protein 1, chloroplast
           precursor, putative [Ricinus communis]
          Length = 311

 Score =  194 bits (494), Expect = 1e-47
 Identities = 99/130 (76%), Positives = 112/130 (86%), Gaps = 3/130 (2%)
 Frame = +3

Query: 294 LSDNIKGHVEDKVGKAIQKHSHLVREVDVRLSVRGGEFGKGPKVRRSEVTLFTKKHGVIR 473
           L+D +K HVEDKVGKA+QKHSHLVREVDVRLSVRGGEFGKGPK+RR EVTLFTKKHGVIR
Sbjct: 99  LTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTLFTKKHGVIR 158

Query: 474 AEVDAETMYASIDAVSSVIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEAMLLQNGS--- 644
           AE DAET+YASID VSS+IQRKLRKIKEK SDHGRHMKGF+RLKVR+P A  +++ +   
Sbjct: 159 AEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVAEPVKDDTDEV 218

Query: 645 TSSAQDEDDD 674
                DED+D
Sbjct: 219 DGVLGDEDED 228


>ref|NP_001233834.1| chloroplast-specific ribosomal protein [Solanum lycopersicum]
           gi|51457950|gb|AAU03364.1| chloroplast-specific
           ribosomal protein [Solanum lycopersicum]
          Length = 311

 Score =  194 bits (494), Expect = 1e-47
 Identities = 94/129 (72%), Positives = 112/129 (86%)
 Frame = +3

Query: 294 LSDNIKGHVEDKVGKAIQKHSHLVREVDVRLSVRGGEFGKGPKVRRSEVTLFTKKHGVIR 473
           L+  +K +VE+K+GKA+QKHSHL REVDVRLSVRGGE GKGPK+RR EVTLFTKKHGVIR
Sbjct: 96  LTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIR 155

Query: 474 AEVDAETMYASIDAVSSVIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEAMLLQNGSTSS 653
           AE D E++Y SID VSS+IQRKLRKIKEKDSD GRHMKGFDRLKVRDPEA+L+Q    + 
Sbjct: 156 AEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVRDPEALLVQEDLETL 215

Query: 654 AQDEDDDDE 680
           +Q+E+ +D+
Sbjct: 216 SQEEEVEDD 224