BLASTX nr result

ID: Bupleurum21_contig00003485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003485
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234368.1| D-cysteine desulfhydrase [Solanum lycopersic...   617   e-174
ref|XP_002454633.1| hypothetical protein SORBIDRAFT_04g034640 [S...   611   e-173
ref|XP_002318328.1| predicted protein [Populus trichocarpa] gi|2...   609   e-172
ref|XP_003570540.1| PREDICTED: putative 1-aminocyclopropane-1-ca...   608   e-172
gb|ACL52405.1| unknown [Zea mays]                                     608   e-171

>ref|NP_001234368.1| D-cysteine desulfhydrase [Solanum lycopersicum]
            gi|186920269|gb|ACC95419.1| D-cysteine desulfhydrase
            [Solanum lycopersicum]
          Length = 425

 Score =  617 bits (1591), Expect = e-174
 Identities = 292/367 (79%), Positives = 332/367 (90%)
 Frame = +3

Query: 3    KTYDPPSWATHLSPIPSHIYSLGHFPTPVHKWNLPNLPKNTEVWLKRDDLSGMQLSGNKV 182
            K Y+PP WA+ LSPIPSH +SLGHFPTP+HKWNLPNLPKNTEVWLKRDD+SGMQLSGNKV
Sbjct: 59   KPYEPPPWASLLSPIPSHTFSLGHFPTPIHKWNLPNLPKNTEVWLKRDDMSGMQLSGNKV 118

Query: 183  RKLEFLLADAVAQGADCIVTIGGIQSNHCRATAVAAKYLNLDCYLILRTSKILLDKDPGL 362
            RKLEFLLADAVAQGADCIVTIGGIQSNHCRATAVAAKYLNLDCYLILRTSK+L+DKDPGL
Sbjct: 119  RKLEFLLADAVAQGADCIVTIGGIQSNHCRATAVAAKYLNLDCYLILRTSKLLVDKDPGL 178

Query: 363  TGNLLVERLVGAHVDLVSKEEYSKVGSLALTDXXXXXXXXXGRKPYVIPVGGSNSLGTWG 542
            TGNLLV+RLVGAH+DLVSKEEY+KVG  ALT          GRKPYVIPVGGSNSLGTWG
Sbjct: 179  TGNLLVDRLVGAHIDLVSKEEYAKVGGEALTKILKEKLLNEGRKPYVIPVGGSNSLGTWG 238

Query: 543  YIEAIREIEMQLQKSAGSLRFDDIVVACGSGGTIAGLSIGSWLSELKAKVHAYCVCDDPE 722
            YIEAIRE+E QLQ  +   +FDDIVVACGSGGT+AGLSI S LS LKAK++A+CVCDDP+
Sbjct: 239  YIEAIRELEQQLQHLSIEQKFDDIVVACGSGGTVAGLSIASMLSGLKAKINAFCVCDDPD 298

Query: 723  YFYDYAQGLLDGLQAGVSSHDIVNIENAKGVGYAMNTTEELRFVKEVAEATGVILDPVYS 902
            YFY+Y QGLLDG+ AGVSS DIV+I+ AKG+GYA++TT+EL+FVK+VAE TGVILDPVYS
Sbjct: 299  YFYEYVQGLLDGITAGVSSRDIVSIKTAKGLGYALSTTDELKFVKQVAETTGVILDPVYS 358

Query: 903  GKAAYGMMKEMSENPSKWEGRRVLFIHTGGLLGLFDKTDQLAALVGKWRTMDIHESVARE 1082
            GKAAYGMMK+M ENP+KWEGR++LFIHTGGLLGL+DK D++ +L+GKWR MDI+ES+ R+
Sbjct: 359  GKAAYGMMKDMGENPTKWEGRKILFIHTGGLLGLYDKADEIGSLMGKWRKMDINESIPRQ 418

Query: 1083 DGIGKMF 1103
            DGIGKMF
Sbjct: 419  DGIGKMF 425


>ref|XP_002454633.1| hypothetical protein SORBIDRAFT_04g034640 [Sorghum bicolor]
            gi|241934464|gb|EES07609.1| hypothetical protein
            SORBIDRAFT_04g034640 [Sorghum bicolor]
          Length = 395

 Score =  611 bits (1576), Expect = e-173
 Identities = 286/367 (77%), Positives = 329/367 (89%)
 Frame = +3

Query: 3    KTYDPPSWATHLSPIPSHIYSLGHFPTPVHKWNLPNLPKNTEVWLKRDDLSGMQLSGNKV 182
            K Y PPSWATHLSP+PSH +SLG FPTP+HKWNLPNLP+ TEVW+KRDDLSGMQLSGNKV
Sbjct: 30   KPYAPPSWATHLSPMPSHTFSLGQFPTPIHKWNLPNLPEGTEVWIKRDDLSGMQLSGNKV 89

Query: 183  RKLEFLLADAVAQGADCIVTIGGIQSNHCRATAVAAKYLNLDCYLILRTSKILLDKDPGL 362
            RKLEFLLADAVAQGADC++T+GGIQSNHCRATAVAAKYLNLDCYLILRTSK+L+DKDPGL
Sbjct: 90   RKLEFLLADAVAQGADCVITVGGIQSNHCRATAVAAKYLNLDCYLILRTSKLLVDKDPGL 149

Query: 363  TGNLLVERLVGAHVDLVSKEEYSKVGSLALTDXXXXXXXXXGRKPYVIPVGGSNSLGTWG 542
             GNLLVERLVGAH+DLVSKEEY K+GS+AL D         GRKPYVIPVGGSNSLGTWG
Sbjct: 150  VGNLLVERLVGAHIDLVSKEEYGKIGSVALADLLKKRLLEEGRKPYVIPVGGSNSLGTWG 209

Query: 543  YIEAIREIEMQLQKSAGSLRFDDIVVACGSGGTIAGLSIGSWLSELKAKVHAYCVCDDPE 722
            YIEAIREIE Q+Q+SA  ++FDDIVVACGSGGTIAGL++GS LS L  KVHA+ VCDDPE
Sbjct: 210  YIEAIREIEQQIQQSA-DVQFDDIVVACGSGGTIAGLALGSRLSSLNTKVHAFSVCDDPE 268

Query: 723  YFYDYAQGLLDGLQAGVSSHDIVNIENAKGVGYAMNTTEELRFVKEVAEATGVILDPVYS 902
            YFYDYAQGL+DGL +G+ SHDIV+I+NAKG+GYAMNT EEL+FVK++A ATG++LDPVYS
Sbjct: 269  YFYDYAQGLIDGLDSGLDSHDIVSIKNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYS 328

Query: 903  GKAAYGMMKEMSENPSKWEGRRVLFIHTGGLLGLFDKTDQLAALVGKWRTMDIHESVARE 1082
            GKA YG++K+M+ NP+KW+GRRVLFIHTGGLLGL+DK DQL++L G WR MD+ +SV R+
Sbjct: 329  GKAVYGLLKDMAANPTKWKGRRVLFIHTGGLLGLYDKADQLSSLAGSWRRMDLEDSVPRK 388

Query: 1083 DGIGKMF 1103
            DG GKMF
Sbjct: 389  DGTGKMF 395


>ref|XP_002318328.1| predicted protein [Populus trichocarpa] gi|222859001|gb|EEE96548.1|
            predicted protein [Populus trichocarpa]
          Length = 387

 Score =  609 bits (1571), Expect = e-172
 Identities = 286/367 (77%), Positives = 330/367 (89%)
 Frame = +3

Query: 3    KTYDPPSWATHLSPIPSHIYSLGHFPTPVHKWNLPNLPKNTEVWLKRDDLSGMQLSGNKV 182
            K Y PPSWA+ L+PIPSHI+SLGH PTP+HKWNLPNLP NTEV+LKRDDLSGMQLSGNKV
Sbjct: 21   KAYTPPSWASLLNPIPSHIFSLGHLPTPIHKWNLPNLPTNTEVYLKRDDLSGMQLSGNKV 80

Query: 183  RKLEFLLADAVAQGADCIVTIGGIQSNHCRATAVAAKYLNLDCYLILRTSKILLDKDPGL 362
            RKLEFL+ADAVAQGADCI+TIGGIQSNHCRATAVAAKYLNLDCYLILR SK+++DKDPGL
Sbjct: 81   RKLEFLMADAVAQGADCIITIGGIQSNHCRATAVAAKYLNLDCYLILRASKVVVDKDPGL 140

Query: 363  TGNLLVERLVGAHVDLVSKEEYSKVGSLALTDXXXXXXXXXGRKPYVIPVGGSNSLGTWG 542
            TGNLLVERLVGA+V L+SKEEY+++GS+ LT+         GRKPYVIPVGGSNSLGTWG
Sbjct: 141  TGNLLVERLVGANVQLISKEEYAQIGSVNLTNDLKEKLVKEGRKPYVIPVGGSNSLGTWG 200

Query: 543  YIEAIREIEMQLQKSAGSLRFDDIVVACGSGGTIAGLSIGSWLSELKAKVHAYCVCDDPE 722
            YIEAIREIE Q+Q + G ++FDDIVVACGSGGTIAGLS+GSWL  LKAKVHA+ VCDDP+
Sbjct: 201  YIEAIREIEQQVQATTGRIKFDDIVVACGSGGTIAGLSLGSWLGTLKAKVHAFAVCDDPD 260

Query: 723  YFYDYAQGLLDGLQAGVSSHDIVNIENAKGVGYAMNTTEELRFVKEVAEATGVILDPVYS 902
            YFY++ Q L+DGL+AGV SHDIVNI+NAKG+GYA+NT+EEL+FVKE+A ATGV+LDPVYS
Sbjct: 261  YFYNFVQDLIDGLKAGVDSHDIVNIQNAKGLGYAINTSEELKFVKEIATATGVVLDPVYS 320

Query: 903  GKAAYGMMKEMSENPSKWEGRRVLFIHTGGLLGLFDKTDQLAALVGKWRTMDIHESVARE 1082
            GKAAYGMMK+M+ENP  WEGR+VLFIHTGGLLGLFDK DQ+++LV  W  M++ ESV R+
Sbjct: 321  GKAAYGMMKDMAENPKNWEGRKVLFIHTGGLLGLFDKVDQMSSLVENWGRMEVQESVPRK 380

Query: 1083 DGIGKMF 1103
            DGIGKMF
Sbjct: 381  DGIGKMF 387


>ref|XP_003570540.1| PREDICTED: putative 1-aminocyclopropane-1-carboxylate deaminase-like
            [Brachypodium distachyon]
          Length = 419

 Score =  608 bits (1568), Expect = e-172
 Identities = 283/367 (77%), Positives = 329/367 (89%)
 Frame = +3

Query: 3    KTYDPPSWATHLSPIPSHIYSLGHFPTPVHKWNLPNLPKNTEVWLKRDDLSGMQLSGNKV 182
            K Y PPSWA+HLS  P H +SLGHFPTP+HKWNLPNLP++TEVW+KRDDLSGMQLSGNKV
Sbjct: 54   KPYTPPSWASHLSLAPPHTFSLGHFPTPIHKWNLPNLPEDTEVWIKRDDLSGMQLSGNKV 113

Query: 183  RKLEFLLADAVAQGADCIVTIGGIQSNHCRATAVAAKYLNLDCYLILRTSKILLDKDPGL 362
            RKLEFLLADAVAQGADC++T+GGIQSNHCRATAVAAKYLNLDCYLILRTSK+L+DKDPGL
Sbjct: 114  RKLEFLLADAVAQGADCVITVGGIQSNHCRATAVAAKYLNLDCYLILRTSKLLVDKDPGL 173

Query: 363  TGNLLVERLVGAHVDLVSKEEYSKVGSLALTDXXXXXXXXXGRKPYVIPVGGSNSLGTWG 542
             GNLLVERL+GAH+DLVSKEEY ++GS+AL D         GRKPYVIPVGGSNSLGTWG
Sbjct: 174  VGNLLVERLLGAHIDLVSKEEYGQIGSVALADLLKKKLLAEGRKPYVIPVGGSNSLGTWG 233

Query: 543  YIEAIREIEMQLQKSAGSLRFDDIVVACGSGGTIAGLSIGSWLSELKAKVHAYCVCDDPE 722
            Y+EAIREIE Q+Q S G ++FDDI+VACGSGGTIAGL++GS LS LKAKVHA+ VCDDPE
Sbjct: 234  YVEAIREIEQQIQLS-GDVQFDDIIVACGSGGTIAGLALGSKLSSLKAKVHAFSVCDDPE 292

Query: 723  YFYDYAQGLLDGLQAGVSSHDIVNIENAKGVGYAMNTTEELRFVKEVAEATGVILDPVYS 902
            YFYDY QGL+DGLQ+G+ S DIV+IENAKG+GYAMNTTEEL+FVK++A ATG++LDPVYS
Sbjct: 293  YFYDYVQGLIDGLQSGLDSRDIVSIENAKGLGYAMNTTEELKFVKDIAAATGIVLDPVYS 352

Query: 903  GKAAYGMMKEMSENPSKWEGRRVLFIHTGGLLGLFDKTDQLAALVGKWRTMDIHESVARE 1082
            GK AYGM+K+MS NP+KW+GR+VLFIHTGGLLGL+DK DQ+++L G WR MD+ ES+ R+
Sbjct: 353  GKGAYGMLKDMSSNPAKWKGRKVLFIHTGGLLGLYDKVDQMSSLAGSWRRMDLQESLPRK 412

Query: 1083 DGIGKMF 1103
            DG GKMF
Sbjct: 413  DGTGKMF 419


>gb|ACL52405.1| unknown [Zea mays]
          Length = 395

 Score =  608 bits (1567), Expect = e-171
 Identities = 284/367 (77%), Positives = 327/367 (89%)
 Frame = +3

Query: 3    KTYDPPSWATHLSPIPSHIYSLGHFPTPVHKWNLPNLPKNTEVWLKRDDLSGMQLSGNKV 182
            K Y PP WATHLSP+P H +SLGHFPTP+HKWNLPNLP+ TEVW+KRDDLSGMQLSGNKV
Sbjct: 30   KPYAPPLWATHLSPMPCHTFSLGHFPTPIHKWNLPNLPEGTEVWIKRDDLSGMQLSGNKV 89

Query: 183  RKLEFLLADAVAQGADCIVTIGGIQSNHCRATAVAAKYLNLDCYLILRTSKILLDKDPGL 362
            RKLEFL+ADAVAQGADC++T+GGIQSNHCRATAVAAKYLNLDCYLILRTSK+L+DKDPGL
Sbjct: 90   RKLEFLMADAVAQGADCVITVGGIQSNHCRATAVAAKYLNLDCYLILRTSKLLVDKDPGL 149

Query: 363  TGNLLVERLVGAHVDLVSKEEYSKVGSLALTDXXXXXXXXXGRKPYVIPVGGSNSLGTWG 542
             GNLLVERLVGAHVDLVSKEEY K+GS+AL D         GRKPYVIPVGGSNSLGTWG
Sbjct: 150  VGNLLVERLVGAHVDLVSKEEYGKIGSVALADLLKKRLLEEGRKPYVIPVGGSNSLGTWG 209

Query: 543  YIEAIREIEMQLQKSAGSLRFDDIVVACGSGGTIAGLSIGSWLSELKAKVHAYCVCDDPE 722
            YIEAIREIE Q+Q+SA  ++FDDIVVACGSGGTIAGL++GS LS L  KVHA+ VCDDPE
Sbjct: 210  YIEAIREIEQQIQQSA-DVQFDDIVVACGSGGTIAGLALGSRLSSLNTKVHAFSVCDDPE 268

Query: 723  YFYDYAQGLLDGLQAGVSSHDIVNIENAKGVGYAMNTTEELRFVKEVAEATGVILDPVYS 902
            YFYDY QGL+DGL +G+ SHDIV+IENAKG+GYAMNT EEL+FVK++A +TG+ILDPVYS
Sbjct: 269  YFYDYVQGLIDGLNSGLDSHDIVSIENAKGLGYAMNTAEELKFVKDIAASTGIILDPVYS 328

Query: 903  GKAAYGMMKEMSENPSKWEGRRVLFIHTGGLLGLFDKTDQLAALVGKWRTMDIHESVARE 1082
            GKA YG++K+M+ NP+KW+GR+VLFIHTGGLLGL+DK DQL++L G WR MD+ +SV R+
Sbjct: 329  GKAVYGLLKDMAGNPAKWKGRKVLFIHTGGLLGLYDKADQLSSLAGSWRRMDLEDSVPRQ 388

Query: 1083 DGIGKMF 1103
            DG GKMF
Sbjct: 389  DGTGKMF 395


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