BLASTX nr result

ID: Bupleurum21_contig00003483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003483
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532112.1| Transcription factor HBP-1b, putative [Ricin...    71   2e-15
ref|XP_002263705.1| PREDICTED: transcription factor TGA4-like [V...    71   2e-14
ref|XP_003551561.1| PREDICTED: TGACG-sequence-specific DNA-bindi...    66   8e-13
ref|XP_003530288.1| PREDICTED: transcription factor HBP-1b(c1)-l...    57   2e-10
ref|XP_004137901.1| PREDICTED: transcription factor TGA7-like [C...    48   1e-07

>ref|XP_002532112.1| Transcription factor HBP-1b, putative [Ricinus communis]
           gi|223528215|gb|EEF30274.1| Transcription factor HBP-1b,
           putative [Ricinus communis]
          Length = 232

 Score = 71.2 bits (173), Expect(2) = 2e-15
 Identities = 32/69 (46%), Positives = 50/69 (72%)
 Frame = +2

Query: 89  RDFEIFLQGCRLVRQQHFHEQLQTTMENIHQFHQDDLSDLVSKVLSHYHQYYEQKSAMAT 268
           + F  F +G  LVRQ+H+ ++L +  ++ H+  ++DL +LVS++LSHY QYYE+KS +  
Sbjct: 20  QSFVSFFEGW-LVRQEHYLDELLSVQQHCHESTEEDLKELVSRILSHYEQYYEEKSRLVQ 78

Query: 269 RNVFVVFSP 295
            NVF+VFSP
Sbjct: 79  GNVFLVFSP 87



 Score = 35.8 bits (81), Expect(2) = 2e-15
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = +1

Query: 316 AFEKSLFWVGGFRPSMAFKVLETVVD 393
           + E+S FW+ GF+PS+AF+VL   V+
Sbjct: 92  SLEQSFFWIAGFKPSLAFRVLSNSVN 117


>ref|XP_002263705.1| PREDICTED: transcription factor TGA4-like [Vitis vinifera]
          Length = 231

 Score = 70.9 bits (172), Expect(2) = 2e-14
 Identities = 35/67 (52%), Positives = 49/67 (73%)
 Frame = +2

Query: 95  FEIFLQGCRLVRQQHFHEQLQTTMENIHQFHQDDLSDLVSKVLSHYHQYYEQKSAMATRN 274
           FE FLQ   +V Q+H+ ++L TT  N  ++ + +++DLVS+VL+HY  YYEQKS +  RN
Sbjct: 11  FERFLQRW-MVSQEHYLDELLTTERNCGEYGEKEMTDLVSRVLTHYQLYYEQKSRVIERN 69

Query: 275 VFVVFSP 295
           VFVVFSP
Sbjct: 70  VFVVFSP 76



 Score = 32.7 bits (73), Expect(2) = 2e-14
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +1

Query: 322 EKSLFWVGGFRPSMAFKVLETVV 390
           E++L W+GGF+P +AF+++   V
Sbjct: 83  ERTLLWIGGFKPGLAFRIVAEAV 105


>ref|XP_003551561.1| PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-1A-like
           [Glycine max]
          Length = 232

 Score = 66.2 bits (160), Expect(2) = 8e-13
 Identities = 30/67 (44%), Positives = 48/67 (71%)
 Frame = +2

Query: 95  FEIFLQGCRLVRQQHFHEQLQTTMENIHQFHQDDLSDLVSKVLSHYHQYYEQKSAMATRN 274
           FE FLQG R VRQ+ + ++L +  ++ H+   DD+  L+++V+ HY QY+E+KS +A +N
Sbjct: 9   FEAFLQGWR-VRQRGYLDELLSAQQHYHELQDDDVKQLINRVVCHYGQYFEEKSKIAHQN 67

Query: 275 VFVVFSP 295
           V +VFSP
Sbjct: 68  VLLVFSP 74



 Score = 32.0 bits (71), Expect(2) = 8e-13
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 316 AFEKSLFWVGGFRPSMAFKVLETVVD 393
           + E++  WVGGF+P +AF+V+   ++
Sbjct: 79  SLERTFLWVGGFKPGVAFQVVNAALE 104


>ref|XP_003530288.1| PREDICTED: transcription factor HBP-1b(c1)-like [Glycine max]
          Length = 233

 Score = 57.4 bits (137), Expect(2) = 2e-10
 Identities = 28/68 (41%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = +2

Query: 95  FEIFLQGCRLVRQQHFHEQLQTTMENIHQFHQDD-LSDLVSKVLSHYHQYYEQKSAMATR 271
           FE FLQG  +VRQ+ + ++L +  ++  +   DD +  L+++V+ HY QY+E+KS +A +
Sbjct: 9   FEAFLQGW-MVRQRGYLDELLSAQQHYQEMQDDDDVRQLINRVICHYGQYFEEKSKIAHQ 67

Query: 272 NVFVVFSP 295
           NV +VFSP
Sbjct: 68  NVLLVFSP 75



 Score = 32.7 bits (73), Expect(2) = 2e-10
 Identities = 10/26 (38%), Positives = 20/26 (76%)
 Frame = +1

Query: 316 AFEKSLFWVGGFRPSMAFKVLETVVD 393
           + E++  WVGGF+P ++F+V+ T ++
Sbjct: 80  SLERTFLWVGGFKPGVSFQVVNTALE 105


>ref|XP_004137901.1| PREDICTED: transcription factor TGA7-like [Cucumis sativus]
           gi|449483715|ref|XP_004156668.1| PREDICTED:
           transcription factor TGA7-like [Cucumis sativus]
          Length = 235

 Score = 48.1 bits (113), Expect(2) = 1e-07
 Identities = 23/58 (39%), Positives = 38/58 (65%)
 Frame = +2

Query: 122 LVRQQHFHEQLQTTMENIHQFHQDDLSDLVSKVLSHYHQYYEQKSAMATRNVFVVFSP 295
           L+RQ+++ + L +T     Q    DL   +S++LSHY  YYE+KS +A  ++F+VF+P
Sbjct: 19  LLRQRNYLDDLLSTAHGTPQ--NRDLQVSISRILSHYEDYYEKKSRIAQTDIFLVFTP 74



 Score = 32.3 bits (72), Expect(2) = 1e-07
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 319 FEKSLFWVGGFRPSMAFKVLETVVD 393
           +EK+L W+GGFRP +  +++   +D
Sbjct: 80  YEKTLLWIGGFRPGLIVRLVNQSID 104


Top