BLASTX nr result

ID: Bupleurum21_contig00003474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003474
         (1726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234335.1| cycloidea [Solanum lycopersicum] gi|12002867...   175   3e-41
ref|XP_002519561.1| conserved hypothetical protein [Ricinus comm...   156   1e-35
gb|AAO43102.1| mutant cincinnata [Antirrhinum majus]                  151   5e-34
gb|AEB37652.1| TCP4 [Helianthus annuus]                               149   3e-33
ref|XP_004137216.1| PREDICTED: transcription factor TCP4-like [C...   148   5e-33

>ref|NP_001234335.1| cycloidea [Solanum lycopersicum] gi|12002867|gb|AAG43412.1| cycloidea
            [Solanum lycopersicum]
          Length = 396

 Score =  175 bits (444), Expect = 3e-41
 Identities = 100/157 (63%), Positives = 109/157 (69%)
 Frame = -1

Query: 1726 HQLIYGGSINTQTSPPPPPENQALKKRSYLPSSSKEYASLGGNMGNSSTQKGTTAAASRF 1547
            H LIYG   + Q  PP P      KKRSYLPS+S    SLG N+ +++  +G  A  SR 
Sbjct: 68   HHLIYGRLDSQQLLPPQPTP----KKRSYLPSTS----SLGQNVEHAAALRGKMAETSRL 119

Query: 1546 GGLRNTSXXXXXXXXXXXXXXVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQD 1367
            G +RNT               VRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQD
Sbjct: 120  G-IRNT---VGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQD 175

Query: 1366 RLGYDRPSKAVDWLIKKAKAAIDELEELPPWTPTTGS 1256
            RLGYDRPSKAVDWLIKKAK AIDEL ELP W PT G+
Sbjct: 176  RLGYDRPSKAVDWLIKKAKPAIDELAELPAWKPTIGT 212



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 37/81 (45%), Positives = 44/81 (54%)
 Frame = -2

Query: 1083 SFLPSSMNSDSIADTIKSFFPMGGXXXXXXXXXXXNIQFHHQNFQQPHLLPGXXXXXXXX 904
            SFLP S+ SD+IADTIKSFFPMG             +QFH  +FQ+PH+L          
Sbjct: 265  SFLPPSLESDAIADTIKSFFPMGS----STSANSSAMQFH--SFQEPHML-SRANSQNQD 317

Query: 903  XXXXXXXXDPMLLHHQNQNEQ 841
                    DP+LLHHQNQ  Q
Sbjct: 318  LSLSLQFQDPILLHHQNQQAQ 338


>ref|XP_002519561.1| conserved hypothetical protein [Ricinus communis]
            gi|223541258|gb|EEF42810.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 595

 Score =  156 bits (395), Expect = 1e-35
 Identities = 92/140 (65%), Positives = 93/140 (66%), Gaps = 9/140 (6%)
 Frame = -1

Query: 1654 KKRSYLPSSSK---------EYASLGGNMGNSSTQKGTTAAASRFGGLRNTSXXXXXXXX 1502
            KKRS+  SSS          EYA     MG S  Q     A S   G RNT         
Sbjct: 151  KKRSHFSSSSSTSIIQEQGFEYAR---KMGESQRQHQQQPARSSRLGTRNT---VGEIVE 204

Query: 1501 XXXXXXVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLI 1322
                  VRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLI
Sbjct: 205  VQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLI 264

Query: 1321 KKAKAAIDELEELPPWTPTT 1262
            KKAKAAIDELEELP W PTT
Sbjct: 265  KKAKAAIDELEELPAWNPTT 284



 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 44/72 (61%), Positives = 45/72 (62%)
 Frame = -1

Query: 562 SQRGPLQSSNTPSFRAMIDPSAFSNDHHQQAASFPFHPSSMSGYGFASAGGFRVPARIQG 383
           SQRGPLQSSN PS RA IDP A  + HH    S   H    S   F    GFRVPARIQG
Sbjct: 518 SQRGPLQSSNMPSIRAWIDPGADHHHHHHTQISQLHHHHQQS---FGGISGFRVPARIQG 574

Query: 382 EEEEHDGISEKP 347
           EEEEHDGI  KP
Sbjct: 575 EEEEHDGIHNKP 586



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 48/130 (36%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
 Frame = -2

Query: 1083 SFLPSSMNSDSIADTIKSFFPMGGXXXXXXXXXXXNIQFHHQNFQQPHLLPGXXXXXXXX 904
            SFLP S++SD+IADTIKSFFPMG              QF       P LL          
Sbjct: 348  SFLPPSLDSDAIADTIKSFFPMGA--------TAETTQFQS---YPPDLLSRTSSQNQDL 396

Query: 903  XXXXXXXXDPMLLHHQN------QNEQTTGLFSGT--NQMG-GYYNSGWSE---NPSNDM 760
                    +P+LL  Q+      QNEQ   L SGT  +  G    ++GWSE   N S D+
Sbjct: 397  RLSLHSFQEPILLQQQHHHHGHAQNEQQVLLSSGTAAHHFGFDGSSAGWSEHHQNHSADI 456

Query: 759  GRYSRLVSWN 730
             R+ R+++WN
Sbjct: 457  ARFQRMIAWN 466


>gb|AAO43102.1| mutant cincinnata [Antirrhinum majus]
          Length = 427

 Score =  151 bits (382), Expect = 5e-34
 Identities = 79/118 (66%), Positives = 86/118 (72%)
 Frame = -1

Query: 1606 GGNMGNSSTQKGTTAAASRFGGLRNTSXXXXXXXXXXXXXXVRSTGRKDRHSKVCTAKGP 1427
            GG   N++T   TT   S   GLRN+               VRSTGRKDRHSKVCTAKGP
Sbjct: 7    GGESSNNTTHNHTTTTTSSRLGLRNS--VGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGP 64

Query: 1426 RDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELEELPPWTPTTGSI 1253
            RDRRVRL+AHTAIQFYDVQDRLGYDRPSKAVDWLIKKAK+AIDEL +LP W PT  S+
Sbjct: 65   RDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAQLPAWDPTACSV 122



 Score = 95.9 bits (237), Expect = 3e-17
 Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 4/77 (5%)
 Frame = -1

Query: 565 FSQRGPLQSSNTPSFRAMIDPSAFSNDHHQQAASFPFHPSSMSGYGFASA----GGFRVP 398
           FSQRGPLQSSNTPS RA +DP++   DH    ++ P +PSS+SG GF+S      GF +P
Sbjct: 342 FSQRGPLQSSNTPSVRAWMDPASAMADHSHHQSNVPIYPSSISGIGFSSGVGGFPGFHIP 401

Query: 397 ARIQGEEEEHDGISEKP 347
           ARIQG+EEEHDG S+KP
Sbjct: 402 ARIQGDEEEHDGYSDKP 418


>gb|AEB37652.1| TCP4 [Helianthus annuus]
          Length = 317

 Score =  149 bits (375), Expect = 3e-33
 Identities = 71/79 (89%), Positives = 73/79 (92%)
 Frame = -1

Query: 1480 RSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAI 1301
            RSTG KDRHSKVCTAKGPRDRRVRLSA+TAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAI
Sbjct: 93   RSTGLKDRHSKVCTAKGPRDRRVRLSANTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAI 152

Query: 1300 DELEELPPWTPTTGSIPII 1244
            DEL ELP WTPT G  PI+
Sbjct: 153  DELAELPAWTPTAGKXPIV 171


>ref|XP_004137216.1| PREDICTED: transcription factor TCP4-like [Cucumis sativus]
            gi|449531426|ref|XP_004172687.1| PREDICTED: transcription
            factor TCP4-like [Cucumis sativus]
          Length = 428

 Score =  148 bits (373), Expect = 5e-33
 Identities = 80/114 (70%), Positives = 84/114 (73%)
 Frame = -1

Query: 1597 MGNSSTQKGTTAAASRFGGLRNTSXXXXXXXXXXXXXXVRSTGRKDRHSKVCTAKGPRDR 1418
            MG S  Q   T+ +SR G    T               VRSTGRKDRHSKVCTAKGPRDR
Sbjct: 1    MGESHRQ---TSTSSRLG--MRTGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDR 55

Query: 1417 RVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELEELPPWTPTTGS 1256
            RVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDEL ELP W P+TG+
Sbjct: 56   RVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWHPSTGN 109



 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 49/75 (65%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
 Frame = -1

Query: 565 FSQRGPLQSSNTPSFRAMIDPSAFSNDHHQQAASFPFHPSSMSGYGFASAG--GFRVPAR 392
           FSQRGPLQSSNTPS RA IDPS    DH Q       H SS +G GFAS G  GF +P R
Sbjct: 346 FSQRGPLQSSNTPSIRAWIDPSLTHTDHQQHQIPPSIHQSSYAGLGFASGGFSGFHIPTR 405

Query: 391 IQGEEEEHDGISEKP 347
           IQG EEEHDGIS+KP
Sbjct: 406 IQG-EEEHDGISDKP 419



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 50/130 (38%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
 Frame = -2

Query: 1083 SFLPSSMNSDSIADTIKSFFPMGGXXXXXXXXXXXNIQFHHQNFQQPHLLPGXXXXXXXX 904
            SFLP S++SDSIADTIKSFFP+ G           +IQF  QN+ Q  LL          
Sbjct: 175  SFLPPSLDSDSIADTIKSFFPI-GTSAAAAETTSSSIQF--QNYPQ-DLLSRTSSQNQDL 230

Query: 903  XXXXXXXXDPMLLH------HQNQNEQTTG-LFSGTNQMGGY--YNSGWSENPS---NDM 760
                    DP+ +H      HQ+Q  Q    LFSGT  + G+    +GWSE+ S    ++
Sbjct: 231  RLSLQSFQDPIAIHRHHHAQHQSQGHQNEHVLFSGTAPLSGFDVTTAGWSEHNSLNPAEI 290

Query: 759  GRYSRLVSWN 730
             R+ R+ SWN
Sbjct: 291  SRFPRITSWN 300


Top