BLASTX nr result

ID: Bupleurum21_contig00003459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003459
         (1285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516959.1| conserved hypothetical protein [Ricinus comm...   324   3e-86
ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|2...   301   2e-79
ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-li...   297   5e-78
emb|CBI22967.3| unnamed protein product [Vitis vinifera]              293   7e-77
ref|XP_002314365.1| predicted protein [Populus trichocarpa] gi|2...   275   2e-71

>ref|XP_002516959.1| conserved hypothetical protein [Ricinus communis]
            gi|223544047|gb|EEF45573.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 667

 Score =  324 bits (831), Expect = 3e-86
 Identities = 177/316 (56%), Positives = 221/316 (69%), Gaps = 7/316 (2%)
 Frame = +3

Query: 99   WKPLNPHEPGNLKIKPFKKVKARGIDWSKSSKSVPITKEFPVAPLHGPINSDLTQIWESL 278
            WKPLNPHEPG LK+KPF+KVK    +  KS++   IT  FP+A + G I+ +LT+IWE+ 
Sbjct: 299  WKPLNPHEPGTLKVKPFRKVKPYRRNVVKSARQTSITTMFPLARMRGTISPELTEIWEA- 357

Query: 279  NHFSDNQQLES---PPLYEKLRQSLDLGEQLRQPPGLSENGIPGEFEPKNDDDNGYDSEN 449
              FS +++ ES   PPLYEKLRQSL  G       G + +   G  E  +D+ N +DS  
Sbjct: 358  -RFSRSEKTESADSPPLYEKLRQSLSNG-------GYNNSDTFGNAE-NDDEGNEHDSGV 408

Query: 450  ANFGPSDFDIPENTYMAED--HDDAGAA--FPIDNAFENDDPAPDANLEDLCRRHLDNLL 617
             +FG  D DIPEN YM ED  H+  G++  F I+ AF N+DP+  A+LEDLCR HLD LL
Sbjct: 409  PDFGQPDDDIPENMYMDEDLHHEKVGSSTHFDINEAFGNEDPSSQASLEDLCRSHLDALL 468

Query: 618  ANIGEMEQQTELAVRVSTWKQRIEENLEEQESLPPFDIHDYGEKVLEKLSAVTEGETTMS 797
            ANI E E+QTELA RVS+WKQ+IE NLEEQ+S P FDIH YGE++L+KLS    GE  MS
Sbjct: 469  ANIAETEKQTELATRVSSWKQKIEHNLEEQDSRPSFDIHAYGERILDKLSLEANGENVMS 528

Query: 798  FTDVVKGQEKHDVARSFSALLQLVNNGNVDLLRAEDGNHDLRCYTGKKPFHIKLRRHVKR 977
            F DVVKGQEKHDVAR+FSALLQLVNNG+V+L R+  G   + CYT   PFHI+L  H KR
Sbjct: 529  FADVVKGQEKHDVARTFSALLQLVNNGDVNLERSGVGGMSV-CYTAMNPFHIQLLNHDKR 587

Query: 978  RQEVQLRSSKKKAKSP 1025
            R+++Q R SKK+ KSP
Sbjct: 588  RKDLQFRLSKKRVKSP 603


>ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|222838580|gb|EEE76945.1|
            predicted protein [Populus trichocarpa]
          Length = 645

 Score =  301 bits (771), Expect = 2e-79
 Identities = 167/334 (50%), Positives = 218/334 (65%), Gaps = 10/334 (2%)
 Frame = +3

Query: 99   WKPLNPHEPGNLKIKPFKKVKARGIDWSKSSKSVPITKEFPVAPLHGPINSDLTQIWESL 278
            WKPLNPHEPGNLK+KPF+KVKA   +  KS+K   IT  FP A +HGP++ DLT++WE+ 
Sbjct: 301  WKPLNPHEPGNLKVKPFEKVKAFRRNGKKSAKQASITTLFPPARMHGPVSLDLTEMWEAR 360

Query: 279  -NHFSDNQQLESPPLYEKLRQSL-DLGEQLRQPPGLSENGIPGEFEPKNDDDNGYDSENA 452
             N    ++  +  PLY KLR+SL + G  +    G S N         +++DN YD+   
Sbjct: 361  QNELGKHRNTQPTPLYVKLRKSLTNEGHNIPDTFGTSGN---------DNEDNAYDTGFP 411

Query: 453  NFGPSDFDIPENTYMAED-------HDDAGAAFPIDNAFENDDPAPDANLEDLCRRHLDN 611
            +FG  D +IPE  Y  ED       HDD    F     F + D +  A+LEDLCR HLD 
Sbjct: 412  DFGQHDDEIPE--YKDEDFPPPREKHDDGATCFDTYKDFGHGDQSSQASLEDLCRSHLDA 469

Query: 612  LLANIGEMEQQTELAVRVSTWKQRIEENLEEQESLPPFDIHDYGEKVLEKLSAVTEGETT 791
            LLANI E E+QTELA RVS+WKQ+IE+NLEEQ+S PPFDIH YGE++++KLS   + +  
Sbjct: 470  LLANIAETEKQTELATRVSSWKQKIEQNLEEQDSHPPFDIHAYGERIVDKLSLEVDSKNV 529

Query: 792  MSFTDVVKGQEKHDVARSFSALLQLVNNGNVDLLRAEDGNHDLRCYTGKKPFHIKLRRHV 971
            M+FTDVVKGQEKHDVAR+FSALLQLVNNG VDL R++  N +  CY+   PF+++L  H 
Sbjct: 530  MAFTDVVKGQEKHDVARTFSALLQLVNNGEVDLERSQ-ANGESFCYSAVNPFNVRLLGHK 588

Query: 972  KRRQEVQLRSSKKKAKSPTNNVEAQVGK-GKSSR 1070
            K ++  Q + SKK+ KSP      + GK G +SR
Sbjct: 589  KDQEGRQFQMSKKRVKSPIRKRGPRPGKNGGTSR 622


>ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-like [Vitis vinifera]
          Length = 666

 Score =  297 bits (760), Expect = 5e-78
 Identities = 173/331 (52%), Positives = 209/331 (63%), Gaps = 8/331 (2%)
 Frame = +3

Query: 99   WKPLNPHEPGNLKIKPFKKVKARGIDWSKSSKSVPITKEFPVAPLHGPINSDLTQIWESL 278
            WKPLNPHE GNLK+KPFKKVKA       S+K   +T +FP+A +HGPI+ +LT+IWE  
Sbjct: 303  WKPLNPHEAGNLKVKPFKKVKAFRRHGVCSTKHNILTTQFPLAKMHGPISPELTEIWEKH 362

Query: 279  NHFSDNQQLESPPLYEKLRQSLDLGEQLRQPPGLSENGIPGEFEPKNDDDNGYDSENANF 458
                  Q+ ++PPLYEKLR SL  G+        S+          N +D GYDS   +F
Sbjct: 363  RACERQQEPQTPPLYEKLRNSLIHGD--------SQTFSAYSNVEDNKEDGGYDSGVNDF 414

Query: 459  GPSDFDIPENTYMAED-------HDDAGAAFP-IDNAFENDDPAPDANLEDLCRRHLDNL 614
            G    ++P + YM +D       HDD  A F  IDN            LEDLCR HLD L
Sbjct: 415  GD---EMPHDMYMDDDLPLHQEQHDDGAACFDSIDN------------LEDLCRSHLDAL 459

Query: 615  LANIGEMEQQTELAVRVSTWKQRIEENLEEQESLPPFDIHDYGEKVLEKLSAVTEGETTM 794
            LANI E E+QTELA RVSTWKQ+IE +LEEQ+  PPFDIHDYG+++LEKLS   E    M
Sbjct: 460  LANIAETEKQTELAARVSTWKQKIEHDLEEQDLRPPFDIHDYGDRILEKLSHKAENGNVM 519

Query: 795  SFTDVVKGQEKHDVARSFSALLQLVNNGNVDLLRAEDGNHDLRCYTGKKPFHIKLRRHVK 974
            SF++VV GQEKHDVARSFSALLQLVNN +V+L R       + CYT   PF+IKL    K
Sbjct: 520  SFSEVVSGQEKHDVARSFSALLQLVNNEDVNLDRGGTDGESV-CYTDANPFYIKLLNRDK 578

Query: 975  RRQEVQLRSSKKKAKSPTNNVEAQVGKGKSS 1067
            RR+EVQLRS+KK+AKSPT   E   GK   S
Sbjct: 579  RREEVQLRSTKKRAKSPTKK-ECTKGKRDKS 608


>emb|CBI22967.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score =  293 bits (750), Expect = 7e-77
 Identities = 173/335 (51%), Positives = 213/335 (63%), Gaps = 12/335 (3%)
 Frame = +3

Query: 99   WKPLNPHEPGNLKIKPFKKVKARGIDWSKSSKSVPITKEFPVAPLHGPINSDLTQIWESL 278
            WKPLNPHE GNLK+KPFKKVKA       S+K   +T +FP+A +HGPI+ +LT+IWE  
Sbjct: 903  WKPLNPHEAGNLKVKPFKKVKAFRRHGVCSTKHNILTTQFPLAKMHGPISPELTEIWEKH 962

Query: 279  NHFSDNQQLESPPLYEKLRQSLDLGEQLRQPPGLSENGIPGEFEPKNDDDNGYDSENANF 458
                  Q+ ++PPLYEKLR SL  G+        S+          N +D GYDS   +F
Sbjct: 963  RACERQQEPQTPPLYEKLRNSLIHGD--------SQTFSAYSNVEDNKEDGGYDSGVNDF 1014

Query: 459  GPSDFDIPENTYMAED---HDDAGAAFPI-----DNAFENDDPAP--DA--NLEDLCRRH 602
            G    ++P + YM +D   H +     P+      N   +DD A   D+  NLEDLCR H
Sbjct: 1015 GD---EMPHDMYMDDDLPLHQEQ-VRLPVLMCQEQNIMHHDDGAACFDSIDNLEDLCRSH 1070

Query: 603  LDNLLANIGEMEQQTELAVRVSTWKQRIEENLEEQESLPPFDIHDYGEKVLEKLSAVTEG 782
            LD LLANI E E+QTELA RVSTWKQ+IE +LEEQ+  PPFDIHDYG+++LEKLS   E 
Sbjct: 1071 LDALLANIAETEKQTELAARVSTWKQKIEHDLEEQDLRPPFDIHDYGDRILEKLSHKAEN 1130

Query: 783  ETTMSFTDVVKGQEKHDVARSFSALLQLVNNGNVDLLRAEDGNHDLRCYTGKKPFHIKLR 962
               MSF++VV GQEKHDVARSFSALLQLVNN +V+L R       + CYT   PF+IKL 
Sbjct: 1131 GNVMSFSEVVSGQEKHDVARSFSALLQLVNNEDVNLDRGGTDGESV-CYTDANPFYIKLL 1189

Query: 963  RHVKRRQEVQLRSSKKKAKSPTNNVEAQVGKGKSS 1067
               KRR+EVQLRS+KK+AKSPT   E   GK   S
Sbjct: 1190 NRDKRREEVQLRSTKKRAKSPTKK-ECTKGKRDKS 1223


>ref|XP_002314365.1| predicted protein [Populus trichocarpa] gi|222863405|gb|EEF00536.1|
            predicted protein [Populus trichocarpa]
          Length = 657

 Score =  275 bits (703), Expect = 2e-71
 Identities = 159/334 (47%), Positives = 208/334 (62%), Gaps = 10/334 (2%)
 Frame = +3

Query: 99   WKPLNPHEPGNLKIKPFKK-VKARGIDWSKSSKSVPITKEFPVAPLHGPINSDLTQIWES 275
            WKPLNPHEPGNLK+K FKK VK    +  KS++   IT  FP+A +HG I+ DL +IWE+
Sbjct: 310  WKPLNPHEPGNLKVKTFKKAVKDFRRNGLKSAEKTSITALFPLARMHGTISPDLAKIWEA 369

Query: 276  L-NHFSDNQQLESPPLYEKLRQSLDLGEQLRQPPGLSENGIPGEFEPKNDDDNGYDSENA 452
              N    +   +SP LYEK+   L +      P     +G        +++DN YD+   
Sbjct: 370  QQNKIGKHGNTQSPTLYEKVLVFLLMSLWHNIPDTYGNSG-------NDNEDNAYDTGIP 422

Query: 453  NFGPSDFDIPENTY------MAEDHDDAGAAFPIDNAFENDDPAPDANLEDLCRRHLDNL 614
            +FG  D +I E         + E HDD G  F     F + D    A+LEDLCR HLD L
Sbjct: 423  DFGQPDEEISECMNEDSPPPLHEKHDDGGTHFDTYKDFGHGDQRSQASLEDLCRSHLDAL 482

Query: 615  LANIGEMEQQTELAVRVSTWKQRIEENLEEQESLPPFDIHDYGEKVLEKLSAVTEGET-T 791
            LANI E E+QTELA RVS+WK +IE+NLEEQ+S PPFDIH YGE++++KLS  T+ +   
Sbjct: 483  LANIAETEKQTELAARVSSWKLKIEQNLEEQDSHPPFDIHAYGERIVDKLSLETDSKKYV 542

Query: 792  MSFTDVVKGQEKHDVARSFSALLQL-VNNGNVDLLRAEDGNHDLRCYTGKKPFHIKLRRH 968
            M+FTDVVKGQEKHDVAR+FSALLQL VNNG VD  R++  N +  CYT   PFH++L  H
Sbjct: 543  MAFTDVVKGQEKHDVARTFSALLQLVVNNGEVDFDRSQ-ANTESFCYTAVNPFHVRLLSH 601

Query: 969  VKRRQEVQLRSSKKKAKSPTNNVEAQVGKGKSSR 1070
             K ++  Q + SKK+ KSP      ++GK  ++R
Sbjct: 602  KKEQEGRQFQLSKKRVKSPIRKGGPKLGKNGNTR 635


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