BLASTX nr result

ID: Bupleurum21_contig00003428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003428
         (1455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB16991.1| unknown [Solanum tuberosum]                            241   5e-61
gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tub...   230   8e-58
ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis...   218   4e-54
gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]    213   8e-53
emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]   205   2e-50

>gb|ABB16991.1| unknown [Solanum tuberosum]
          Length = 304

 Score =  241 bits (614), Expect = 5e-61
 Identities = 137/242 (56%), Positives = 160/242 (66%), Gaps = 25/242 (10%)
 Frame = -1

Query: 1248 MANNPPDGYSDDFLEQILAIPSYNGLSNTD-GASSDTASQLSG----------VAGVQQP 1102
            MA N P+ Y+DDFLEQILAIPSY+GL   D G  S+T S  S            AG+QQP
Sbjct: 1    MAANQPEAYADDFLEQILAIPSYSGLPVADVGTPSETTSFTSASAVSHLNSAAAAGLQQP 60

Query: 1101 FFPLGLSLDNGQ------------RERGTMNMGNLFPVFEHLQPHSVRHAAPQMH--QNF 964
             FPLGLSLDNG+             ER  MN+GNL+   EHLQ H+VRH+ P +H  Q F
Sbjct: 61   LFPLGLSLDNGRDDVSEAGAYAVKHERDGMNIGNLYAGLEHLQSHAVRHSVPSIHHVQPF 120

Query: 963  QGQXXXXXXXTVAHPPNMRTRVRARRGQATDPHSXXXXXXXXXXXXXXXXLQELVPSCNK 784
            QG        TV HPP++R RVRARRGQATDPHS                LQELVPSCNK
Sbjct: 121  QGPPTTSTTVTVPHPPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK 180

Query: 783  SDKAAMLDEILEYVKFLRLQVKVLSMSRLGGAGAVAQLVSDVPLQSVEGGMTENGGDRPV 604
            +D+AAMLDEIL+YVKFLRLQVKVLSMSRLGGA AVAQLV+D+PLQSVEG   E+  ++ +
Sbjct: 181  TDRAAMLDEILDYVKFLRLQVKVLSMSRLGGASAVAQLVADIPLQSVEGDSGESRSNQHI 240

Query: 603  WE 598
            W+
Sbjct: 241  WD 242


>gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
          Length = 303

 Score =  230 bits (586), Expect = 8e-58
 Identities = 135/242 (55%), Positives = 157/242 (64%), Gaps = 25/242 (10%)
 Frame = -1

Query: 1248 MANNPPDGYSDDFLEQILAIPSYNGLSNTD-GASSDTASQLSG----------VAGVQQP 1102
            MA N P+ Y+DDFLEQILAIPSY GL   D G  S+T S  S            AG+QQP
Sbjct: 1    MAANQPEAYADDFLEQILAIPSY-GLPVADVGTPSETTSFTSASAVSRLNSAAAAGLQQP 59

Query: 1101 FFPLGLSLDNGQ------------RERGTMNMGNLFPVFEHLQPHSVRHAAPQMH--QNF 964
             FPLGLSLDNG+             ER  MN+GNL+   EH Q H+VRH+ P +H  Q F
Sbjct: 60   MFPLGLSLDNGRDNVSEAGAYAVKHERDGMNIGNLYAGLEHSQSHAVRHSLPSVHHVQPF 119

Query: 963  QGQXXXXXXXTVAHPPNMRTRVRARRGQATDPHSXXXXXXXXXXXXXXXXLQELVPSCNK 784
            QG        TV  PP++R RVRARRGQATDPHS                LQELVPSCNK
Sbjct: 120  QGPPTTSTTVTVPQPPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK 179

Query: 783  SDKAAMLDEILEYVKFLRLQVKVLSMSRLGGAGAVAQLVSDVPLQSVEGGMTENGGDRPV 604
            +D+AAMLDEIL+YVKFLRLQVKVLSMSRLGGA AVAQLV+D+PLQSVEG   E+  ++ +
Sbjct: 180  TDRAAMLDEILDYVKFLRLQVKVLSMSRLGGASAVAQLVADIPLQSVEGDSGESRSNQRI 239

Query: 603  WE 598
            W+
Sbjct: 240  WD 241


>ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
            gi|297737150|emb|CBI26351.3| unnamed protein product
            [Vitis vinifera]
          Length = 313

 Score =  218 bits (554), Expect = 4e-54
 Identities = 127/251 (50%), Positives = 150/251 (59%), Gaps = 34/251 (13%)
 Frame = -1

Query: 1248 MANNPPDGYSDDFLEQILAIPSYNGLS-NTDGASSDTASQLSGV--------AGVQQPFF 1096
            MA NPP+GY+DDFLEQILAIPSY G   N  G  S    QLS           G Q P F
Sbjct: 1    MATNPPEGYADDFLEQILAIPSYPGHDPNMVGTGSTMVLQLSSGDGSGHVAGGGFQGPVF 60

Query: 1095 PLGLSLDNG-------------------------QRERGTMNMGNLFPVFEHLQPHSVRH 991
            PLGLSL++G                         + ER ++++  LFP + H+Q  SVR 
Sbjct: 61   PLGLSLESGIPATQVAPGSGERFRDDVDARGSSGRSERESVHLDGLFPAYGHVQSLSVRP 120

Query: 990  AAPQMHQNFQGQXXXXXXXTVAHPPNMRTRVRARRGQATDPHSXXXXXXXXXXXXXXXXL 811
            A PQ+HQ F GQ          HPP +R RVRARRGQATDPHS                L
Sbjct: 121  AVPQVHQAFHGQPTPVPITAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKAL 180

Query: 810  QELVPSCNKSDKAAMLDEILEYVKFLRLQVKVLSMSRLGGAGAVAQLVSDVPLQSVEGGM 631
            QELVPS NK+D+AAMLDEI++YVKFLRLQVKVLSMSRLGGAGAVAQLV+D+PL +VEG  
Sbjct: 181  QELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLPAVEGET 240

Query: 630  TENGGDRPVWE 598
             E G ++  W+
Sbjct: 241  GEGGSNQQAWD 251


>gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
          Length = 298

 Score =  213 bits (543), Expect = 8e-53
 Identities = 128/236 (54%), Positives = 156/236 (66%), Gaps = 19/236 (8%)
 Frame = -1

Query: 1248 MANNPPDGYS-DDFLEQILAIPSYNGLSNTD---GASSDTASQLSGVAGVQQP-FFPLGL 1084
            MANN P+ Y+ DDFLE+ILAIPSY  L  TD   GASS+ ++  SG++ +QQ   FPLGL
Sbjct: 1    MANNAPEIYAADDFLEKILAIPSYASLPVTDISAGASSENSA--SGISQLQQQRLFPLGL 58

Query: 1083 SLDNG------------QRERGTMNMGNLFPVFEHLQPHSVRHAAPQMHQ--NFQGQXXX 946
            SLDNG            + ER  M+MGN +   EHLQ H+V  + PQ+HQ   FQG    
Sbjct: 59   SLDNGFAGANDIGGFQVKTEREAMHMGNSYSGLEHLQSHAVCLSVPQVHQVQPFQGHPTS 118

Query: 945  XXXXTVAHPPNMRTRVRARRGQATDPHSXXXXXXXXXXXXXXXXLQELVPSCNKSDKAAM 766
                T+ H P +  RVRARRGQATDPHS                LQELVP+CNK+D+AA+
Sbjct: 119  STTVTIPHQPAIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNKTDRAAL 178

Query: 765  LDEILEYVKFLRLQVKVLSMSRLGGAGAVAQLVSDVPLQSVEGGMTENGGDRPVWE 598
            +DEIL+YVKFLRLQVKVLSMSRLGG  AVAQLV+D+PLQSVEG   E+  ++ VWE
Sbjct: 179  VDEILDYVKFLRLQVKVLSMSRLGGTSAVAQLVTDIPLQSVEGDSCESRSNQHVWE 234


>emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
          Length = 337

 Score =  205 bits (522), Expect = 2e-50
 Identities = 126/275 (45%), Positives = 149/275 (54%), Gaps = 58/275 (21%)
 Frame = -1

Query: 1248 MANNPPDGYSDDFLEQILAIPSYNGLS-NTDGASSDTASQLSGV--------AGVQQPFF 1096
            MA NP +GY+DDFLEQILAIPSY G   N  G  S    QLS           G Q P F
Sbjct: 1    MATNPAEGYTDDFLEQILAIPSYPGHDPNMVGTGSTMVLQLSSGDGSGHVAGGGFQGPVF 60

Query: 1095 PLGLSLDNG-------------------------------------------------QR 1063
            PLGLSL++G                                                 + 
Sbjct: 61   PLGLSLESGIPATQVAPGSGERFRDDVDARGSSGRSGEYVTVRGVFRWRIGGFCFSRART 120

Query: 1062 ERGTMNMGNLFPVFEHLQPHSVRHAAPQMHQNFQGQXXXXXXXTVAHPPNMRTRVRARRG 883
            ER ++++  LFP + H+Q  SVR A PQ+HQ F GQ          HPP +R RVRARRG
Sbjct: 121  ERESVHLDGLFPAYGHVQSLSVRPAVPQVHQAFHGQPTPVPITAAPHPPAIRPRVRARRG 180

Query: 882  QATDPHSXXXXXXXXXXXXXXXXLQELVPSCNKSDKAAMLDEILEYVKFLRLQVKVLSMS 703
            QATDPHS                LQELVPS NK+D+AAMLDEI++YVKFLRLQVKVLSMS
Sbjct: 181  QATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 240

Query: 702  RLGGAGAVAQLVSDVPLQSVEGGMTENGGDRPVWE 598
            RLGGAGAVAQLV+D+PL +VEG   E G ++  W+
Sbjct: 241  RLGGAGAVAQLVADIPLPAVEGETGEGGSNQQAWD 275


Top