BLASTX nr result

ID: Bupleurum21_contig00003401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003401
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510155.1| r2r3-myb transcription factor, putative [Ric...   164   9e-51
gb|AEO27498.1| MYB2 [Chrysanthemum x morifolium]                      166   4e-50
gb|AAG08959.1|AF122051_1 tuber-specific and sucrose-responsive e...   168   5e-50
ref|XP_002285015.1| PREDICTED: transcription factor MYB44-like [...   164   1e-49
ref|XP_002302428.1| predicted protein [Populus trichocarpa] gi|2...   157   2e-49

>ref|XP_002510155.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223550856|gb|EEF52342.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 295

 Score =  164 bits (416), Expect(2) = 9e-51
 Identities = 73/83 (87%), Positives = 79/83 (95%)
 Frame = -1

Query: 569 MDRIKGPWSPEEDELLQRLVDKYGPRNWTLISKSIPGRSGKSCRLRWCNQLSPEVEHRAF 390
           +DRIKGPWSPEEDE LQRLV  YGPRNW+LISKSIPGRSGKSCRLRWCNQLSPEVEHR F
Sbjct: 12  VDRIKGPWSPEEDEALQRLVQNYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 71

Query: 389 TPEEDETILKAHAKFGNKWATIA 321
           TPEEDETI++AH++FGNKWATIA
Sbjct: 72  TPEEDETIMRAHSRFGNKWATIA 94



 Score = 61.2 bits (147), Expect(2) = 9e-51
 Identities = 33/50 (66%), Positives = 34/50 (68%)
 Frame = -2

Query: 241 RLLNGRTDNAIKNHWNSTLKRKXXXXXXXXXXXXXDLQQPLKRSASLGSG 92
           RLLNGRTDNAIKNHWNSTLKRK                QPLKRSASLG+G
Sbjct: 95  RLLNGRTDNAIKNHWNSTLKRKCYDLNDDVAHN----PQPLKRSASLGAG 140


>gb|AEO27498.1| MYB2 [Chrysanthemum x morifolium]
          Length = 315

 Score =  166 bits (421), Expect(2) = 4e-50
 Identities = 74/83 (89%), Positives = 81/83 (97%)
 Frame = -1

Query: 569 MDRIKGPWSPEEDELLQRLVDKYGPRNWTLISKSIPGRSGKSCRLRWCNQLSPEVEHRAF 390
           MDRIKGPWSP+EDE+L  LV+K+GPRNW+LISKSIPGRSGKSCRLRWCNQLSPEVEHRAF
Sbjct: 9   MDRIKGPWSPDEDEMLTNLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAF 68

Query: 389 TPEEDETILKAHAKFGNKWATIA 321
           TPEEDETIL+AHA+FGNKWATIA
Sbjct: 69  TPEEDETILRAHARFGNKWATIA 91



 Score = 57.4 bits (137), Expect(2) = 4e-50
 Identities = 30/50 (60%), Positives = 31/50 (62%)
 Frame = -2

Query: 241 RLLNGRTDNAIKNHWNSTLKRKXXXXXXXXXXXXXDLQQPLKRSASLGSG 92
           RLL+GRTDNAIKNHWNSTLKRK               Q  LKRS S GSG
Sbjct: 92  RLLSGRTDNAIKNHWNSTLKRKCSSMTNEEFNELQVQQPMLKRSVSAGSG 141


>gb|AAG08959.1|AF122051_1 tuber-specific and sucrose-responsive element binding factor
           [Solanum tuberosum]
          Length = 364

 Score =  168 bits (425), Expect(2) = 5e-50
 Identities = 74/83 (89%), Positives = 82/83 (98%)
 Frame = -1

Query: 569 MDRIKGPWSPEEDELLQRLVDKYGPRNWTLISKSIPGRSGKSCRLRWCNQLSPEVEHRAF 390
           MDR+KGPWSPEEDELLQ+LV K+GPRNW+LISKSIPGRSGKSCRLRWCNQLSP+VEHRAF
Sbjct: 1   MDRVKGPWSPEEDELLQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAF 60

Query: 389 TPEEDETILKAHAKFGNKWATIA 321
           TPEEDETI++AHA+FGNKWATIA
Sbjct: 61  TPEEDETIIRAHARFGNKWATIA 83



 Score = 55.5 bits (132), Expect(2) = 5e-50
 Identities = 32/58 (55%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
 Frame = -2

Query: 241 RLLNGRTDNAIKNHWNSTLKRK-----XXXXXXXXXXXXXDLQQPLKRSASLGSGQDV 83
           RLLNGRTDNAIKNHWNSTLKRK                  + Q PLKRS S GS   V
Sbjct: 84  RLLNGRTDNAIKNHWNSTLKRKCSSLSADEGNELADQIFENQQPPLKRSVSAGSAMPV 141


>ref|XP_002285015.1| PREDICTED: transcription factor MYB44-like [Vitis vinifera]
          Length = 313

 Score =  164 bits (416), Expect(2) = 1e-49
 Identities = 73/83 (87%), Positives = 80/83 (96%)
 Frame = -1

Query: 569 MDRIKGPWSPEEDELLQRLVDKYGPRNWTLISKSIPGRSGKSCRLRWCNQLSPEVEHRAF 390
           +DRIKGPWSPEEDE LQRLV K+GPRNW+LISKSIPGRSGKSCRLRWCNQLSP+VEHRAF
Sbjct: 8   LDRIKGPWSPEEDEALQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAF 67

Query: 389 TPEEDETILKAHAKFGNKWATIA 321
           TPEED TI++AHA+FGNKWATIA
Sbjct: 68  TPEEDATIIRAHARFGNKWATIA 90



 Score = 57.4 bits (137), Expect(2) = 1e-49
 Identities = 32/53 (60%), Positives = 34/53 (64%)
 Frame = -2

Query: 241 RLLNGRTDNAIKNHWNSTLKRKXXXXXXXXXXXXXDLQQPLKRSASLGSGQDV 83
           RLL GRTDNAIKNHWNSTLKRK               Q PLKRSAS+G+G  V
Sbjct: 91  RLLVGRTDNAIKNHWNSTLKRK-CSSITEDMIADGHAQPPLKRSASVGAGTTV 142


>ref|XP_002302428.1| predicted protein [Populus trichocarpa] gi|222844154|gb|EEE81701.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  157 bits (398), Expect(2) = 2e-49
 Identities = 70/83 (84%), Positives = 77/83 (92%)
 Frame = -1

Query: 569 MDRIKGPWSPEEDELLQRLVDKYGPRNWTLISKSIPGRSGKSCRLRWCNQLSPEVEHRAF 390
           +DRIKGPWSPEEDE LQRLV  YGPRNW+LISKSIPGRSGKSCRLRWCNQLSPEVEHR F
Sbjct: 8   VDRIKGPWSPEEDEALQRLVQTYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 67

Query: 389 TPEEDETILKAHAKFGNKWATIA 321
           + EED+ I++AHA+FGNKWATIA
Sbjct: 68  SAEEDDAIIRAHARFGNKWATIA 90



 Score = 63.5 bits (153), Expect(2) = 2e-49
 Identities = 34/50 (68%), Positives = 35/50 (70%)
 Frame = -2

Query: 241 RLLNGRTDNAIKNHWNSTLKRKXXXXXXXXXXXXXDLQQPLKRSASLGSG 92
           RLLNGRTDNAIKNHWNSTLKRK               QQPLKRSASLG+G
Sbjct: 91  RLLNGRTDNAIKNHWNSTLKRKCSSMSDDLNDDAH--QQPLKRSASLGAG 138


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