BLASTX nr result

ID: Bupleurum21_contig00003381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003381
         (2035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homol...   154   9e-35
ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homol...   152   2e-34
ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleop...   152   3e-34
emb|CBI23698.3| unnamed protein product [Vitis vinifera]              152   3e-34
ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257...   152   3e-34

>ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
          Length = 471

 Score =  154 bits (389), Expect = 9e-35
 Identities = 73/81 (90%), Positives = 77/81 (95%)
 Frame = +3

Query: 3   TKKIFVGGLPPSLNEEEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVL 182
           TKKIFVGGLPP+L EE+FRQYFESYG+VTDVVVMYDQ T RPRGFGFISFDTEDAVDRVL
Sbjct: 111 TKKIFVGGLPPTLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVL 170

Query: 183 HKTFHDLGGKQVEVKRALPKD 245
           HK+FHDL GKQVEVKRALPKD
Sbjct: 171 HKSFHDLNGKQVEVKRALPKD 191



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 28/79 (35%), Positives = 49/79 (62%)
 Frame = +3

Query: 9   KIFVGGLPPSLNEEEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVLHK 188
           K+F+GG+     E++ +++F +YG V    VM ++ T +PRGFGF+ F   + +DRVL  
Sbjct: 7   KLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLED 66

Query: 189 TFHDLGGKQVEVKRALPKD 245
             H + G+ V+ K+A  ++
Sbjct: 67  K-HVIDGRTVDAKKAFSRE 84


>ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Glycine max]
          Length = 476

 Score =  152 bits (385), Expect = 2e-34
 Identities = 72/81 (88%), Positives = 76/81 (93%)
 Frame = +3

Query: 3   TKKIFVGGLPPSLNEEEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVL 182
           TKKIFVGGLPP+L EE+FR YFESYGHVTDVVVMYDQ T RPRGFGFISFDTE+AVDRVL
Sbjct: 111 TKKIFVGGLPPTLTEEKFRLYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEEAVDRVL 170

Query: 183 HKTFHDLGGKQVEVKRALPKD 245
           HK+FHDL GKQVEVKRALPKD
Sbjct: 171 HKSFHDLNGKQVEVKRALPKD 191



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 28/79 (35%), Positives = 49/79 (62%)
 Frame = +3

Query: 9   KIFVGGLPPSLNEEEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVLHK 188
           K+F+GG+     E++ +++F +YG V    VM ++ T +PRGFGF+ F   + +DRVL  
Sbjct: 7   KLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLED 66

Query: 189 TFHDLGGKQVEVKRALPKD 245
             H + G+ V+ K+A  ++
Sbjct: 67  K-HVIDGRTVDAKKAFSRE 84


>ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cucumis
           sativus]
          Length = 462

 Score =  152 bits (384), Expect = 3e-34
 Identities = 71/81 (87%), Positives = 76/81 (93%)
 Frame = +3

Query: 3   TKKIFVGGLPPSLNEEEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVL 182
           TKKIFVGGLPP+L EE F++YFE+YGHVTDVVVMYDQ T RPRGFGFISFDTE+AVDRVL
Sbjct: 110 TKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVL 169

Query: 183 HKTFHDLGGKQVEVKRALPKD 245
           HKTFHDL GKQVEVKRALPKD
Sbjct: 170 HKTFHDLNGKQVEVKRALPKD 190



 Score = 75.9 bits (185), Expect = 4e-11
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = +3

Query: 9   KIFVGGLPPSLNEEEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVLHK 188
           K+F+GG+    +E++ + YF +YG V   VVM D+ T+RPRGFGF+ F     +DRVL  
Sbjct: 7   KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66

Query: 189 TFHDLGGKQVEVKRALPKD 245
             H + GK VE KRAL ++
Sbjct: 67  K-HTIDGKTVEAKRALSRE 84


>emb|CBI23698.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  152 bits (384), Expect = 3e-34
 Identities = 71/81 (87%), Positives = 77/81 (95%)
 Frame = +3

Query: 3   TKKIFVGGLPPSLNEEEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVL 182
           TKKIFVGGLPP+L+EE FRQYFE++GHVTDVVVMYDQ T RPRGFGF+SFDTEDAVDRVL
Sbjct: 109 TKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVL 168

Query: 183 HKTFHDLGGKQVEVKRALPKD 245
           +KTFHDL GKQVEVKRALPKD
Sbjct: 169 YKTFHDLNGKQVEVKRALPKD 189



 Score = 76.3 bits (186), Expect = 3e-11
 Identities = 36/79 (45%), Positives = 53/79 (67%)
 Frame = +3

Query: 9   KIFVGGLPPSLNEEEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVLHK 188
           K+F+GG+    +E++ ++YF SYG V+  VVM D+ T RPRGFGF+ F     +DRVL +
Sbjct: 7   KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66

Query: 189 TFHDLGGKQVEVKRALPKD 245
             H + G+ VE KRAL ++
Sbjct: 67  K-HIIDGRTVEAKRALSRE 84


>ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
          Length = 464

 Score =  152 bits (384), Expect = 3e-34
 Identities = 71/81 (87%), Positives = 77/81 (95%)
 Frame = +3

Query: 3   TKKIFVGGLPPSLNEEEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVL 182
           TKKIFVGGLPP+L+EE FRQYFE++GHVTDVVVMYDQ T RPRGFGF+SFDTEDAVDRVL
Sbjct: 109 TKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVL 168

Query: 183 HKTFHDLGGKQVEVKRALPKD 245
           +KTFHDL GKQVEVKRALPKD
Sbjct: 169 YKTFHDLNGKQVEVKRALPKD 189



 Score = 76.3 bits (186), Expect = 3e-11
 Identities = 36/79 (45%), Positives = 53/79 (67%)
 Frame = +3

Query: 9   KIFVGGLPPSLNEEEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVLHK 188
           K+F+GG+    +E++ ++YF SYG V+  VVM D+ T RPRGFGF+ F     +DRVL +
Sbjct: 7   KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66

Query: 189 TFHDLGGKQVEVKRALPKD 245
             H + G+ VE KRAL ++
Sbjct: 67  K-HIIDGRTVEAKRALSRE 84


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