BLASTX nr result

ID: Bupleurum21_contig00003369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003369
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319075.1| predicted protein [Populus trichocarpa] gi|2...   235   7e-60
emb|CAH59413.1| auxin resistance protein [Plantago major]             234   1e-59
ref|XP_002531288.1| Auxin-responsive protein IAA16, putative [Ri...   234   2e-59
gb|AAM21317.1|AF373100_1 auxin-regulated protein [Populus tremul...   234   2e-59
ref|XP_002520980.1| Auxin-induced protein AUX28, putative [Ricin...   233   2e-59

>ref|XP_002319075.1| predicted protein [Populus trichocarpa] gi|222857451|gb|EEE94998.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  235 bits (599), Expect = 7e-60
 Identities = 133/235 (56%), Positives = 158/235 (67%), Gaps = 3/235 (1%)
 Frame = -3

Query: 698 VVSILGDMKGK---MNFEETELRLGLPGNIISKAKNSTISHVTNSXXXATNVNGKRGFAE 528
           + SI+G    K   +NFEETELRLGLPG I     N     V  S       NGKRGF+E
Sbjct: 1   MTSIMGAEPEKYSMINFEETELRLGLPGGI----GNGNDGEVAKS-------NGKRGFSE 49

Query: 527 TTNHVDLKLNLVSSKHVVSQILDQSVLDPVGHGAAGGSKDSVVKPPTKTQVVGWPPVRSY 348
           T   VDLKLNL S+K       ++ V+       A  +     KPP K QVVGWPP+RS+
Sbjct: 50  T---VDLKLNL-STKESGKGGDEEKVMKE--KTVAPPASTDPAKPPAKAQVVGWPPIRSF 103

Query: 347 RKNMVCIQKAADSNKKKGDLESEKVIGGTFVKVSVDGAPYLRKVDLNMYNTYQQLSDALG 168
           RKN++ +QK ++ N   G+       G  FVKVS+DGAPYLRKVDL +Y +YQ+LSDALG
Sbjct: 104 RKNVMAVQKNSNDN---GEKSGSSGTGVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALG 160

Query: 167 KMFSSFTIGKCGSEGMMGFMNESKLMDLLNNSDYVPTYQDKDGDWMLVGDVPWDM 3
           KMFSSFTIG CGS+GM  FMNESKL+DLLN SDYVPTY+DKDGDWMLVGDVPW+M
Sbjct: 161 KMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEM 215


>emb|CAH59413.1| auxin resistance protein [Plantago major]
          Length = 227

 Score =  234 bits (597), Expect = 1e-59
 Identities = 127/222 (57%), Positives = 149/222 (67%)
 Frame = -3

Query: 668 KMNFEETELRLGLPGNIISKAKNSTISHVTNSXXXATNVNGKRGFAETTNHVDLKLNLVS 489
           KMNFEETELRLGLPG   +  + +T            N  GKRG+ +T   VDLKLNL S
Sbjct: 7   KMNFEETELRLGLPGGAAAAGEKTT----------NNNNYGKRGYEQT---VDLKLNL-S 52

Query: 488 SKHVVSQILDQSVLDPVGHGAAGGSKDSVVKPPTKTQVVGWPPVRSYRKNMVCIQKAADS 309
           SK + +Q             A     D  VKPP K QVVGWPPVR++RKN++ +QK   +
Sbjct: 53  SKDLPNQT----------DLAENKKNDQPVKPPAKAQVVGWPPVRNFRKNVMAVQKTEKA 102

Query: 308 NKKKGDLESEKVIGGTFVKVSVDGAPYLRKVDLNMYNTYQQLSDALGKMFSSFTIGKCGS 129
            +  G           FVKVS+DGAPYLRKVDL MY TY++LSDALGKMFSSFT+ KC +
Sbjct: 103 EESGGS--------AAFVKVSMDGAPYLRKVDLKMYKTYEELSDALGKMFSSFTMSKCDA 154

Query: 128 EGMMGFMNESKLMDLLNNSDYVPTYQDKDGDWMLVGDVPWDM 3
           +GMM FMNESKLMDLLN SDYVPTY+DKDGDWMLVGDVPW+M
Sbjct: 155 QGMMDFMNESKLMDLLNGSDYVPTYEDKDGDWMLVGDVPWEM 196


>ref|XP_002531288.1| Auxin-responsive protein IAA16, putative [Ricinus communis]
           gi|223529121|gb|EEF31101.1| Auxin-responsive protein
           IAA16, putative [Ricinus communis]
          Length = 257

 Score =  234 bits (596), Expect = 2e-59
 Identities = 126/230 (54%), Positives = 156/230 (67%), Gaps = 9/230 (3%)
 Frame = -3

Query: 665 MNFEETELRLGLPGNIISKAKNSTISHVTNSXXXATNVNGKRGFAETTNHVDLKLNLVSS 486
           +NFEETELRLGLPG           S+V +S      VNGKRGF+ET   VDLKLNL + 
Sbjct: 15  INFEETELRLGLPGG----------SNVNDSEF--AKVNGKRGFSET---VDLKLNLSTK 59

Query: 485 KHVVSQIL--DQSVLDPVGHGAAGGSKDSVVKPPTKTQVVGWPPVRSYRKNMVCIQKAAD 312
           +     ++  ++++ +         S +   KPP K QVVGWPP+RS+RKN++ +QK + 
Sbjct: 60  EPSGKDVIVGEETMKEKA---TVPSSSNDPAKPPAKAQVVGWPPIRSFRKNVMAVQKNST 116

Query: 311 SNKKKGDLESEKVIGGT-------FVKVSVDGAPYLRKVDLNMYNTYQQLSDALGKMFSS 153
              +KG   S      T       FVKVS+DGAPYLRKVDL +Y +YQ+LSDALGKMFSS
Sbjct: 117 DEGEKGTATSAPAAAATSGSTSAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSS 176

Query: 152 FTIGKCGSEGMMGFMNESKLMDLLNNSDYVPTYQDKDGDWMLVGDVPWDM 3
           FTIG CGS+GM  FMNESKL+DLLN S+YVPTY+DKDGDWMLVGDVPW+M
Sbjct: 177 FTIGNCGSQGMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEM 226


>gb|AAM21317.1|AF373100_1 auxin-regulated protein [Populus tremula x Populus tremuloides]
          Length = 249

 Score =  234 bits (596), Expect = 2e-59
 Identities = 129/221 (58%), Positives = 151/221 (68%)
 Frame = -3

Query: 665 MNFEETELRLGLPGNIISKAKNSTISHVTNSXXXATNVNGKRGFAETTNHVDLKLNLVSS 486
           MNFEETELRLGLPG +     N   S    S       NGKRGF+ET   VDLKLNL S+
Sbjct: 16  MNFEETELRLGLPGGV----SNGNDSEAAKS-------NGKRGFSET---VDLKLNL-ST 60

Query: 485 KHVVSQILDQSVLDPVGHGAAGGSKDSVVKPPTKTQVVGWPPVRSYRKNMVCIQKAADSN 306
           K       DQ  +       A    D   KPP+K QVVGWPP+RS+RKN++ +QK  +SN
Sbjct: 61  KETGKDGSDQEKVVMKEKTVAPRPNDPA-KPPSKAQVVGWPPIRSFRKNVMAVQK--NSN 117

Query: 305 KKKGDLESEKVIGGTFVKVSVDGAPYLRKVDLNMYNTYQQLSDALGKMFSSFTIGKCGSE 126
            +     S    G  FVKVS+DGAPYLRKVDL +Y +Y++LSDALGKMFSSFTIG CGS+
Sbjct: 118 DEGEKASSSGATGAAFVKVSMDGAPYLRKVDLKLYKSYRELSDALGKMFSSFTIGNCGSQ 177

Query: 125 GMMGFMNESKLMDLLNNSDYVPTYQDKDGDWMLVGDVPWDM 3
           G   FMNESKL+DLLN+S+YVPTY+DKDGDWMLVGDVPW M
Sbjct: 178 GTKDFMNESKLIDLLNSSEYVPTYEDKDGDWMLVGDVPWGM 218


>ref|XP_002520980.1| Auxin-induced protein AUX28, putative [Ricinus communis]
           gi|223539817|gb|EEF41397.1| Auxin-induced protein AUX28,
           putative [Ricinus communis]
          Length = 244

 Score =  233 bits (595), Expect = 2e-59
 Identities = 127/223 (56%), Positives = 155/223 (69%), Gaps = 1/223 (0%)
 Frame = -3

Query: 668 KMNFEETELRLGLPGNIISKAKNSTISHVTNSXXXATNVNGKRGFAETTNHVDLKLNLVS 489
           KM FEETELRLGLPGN+     ++T      +      V  KRGF+ET   VDLKLNL S
Sbjct: 10  KMGFEETELRLGLPGNVGGGGSSTT------NTASEGEVARKRGFSET---VDLKLNLSS 60

Query: 488 SKHVVSQILDQSVLDPVGHGAAGGSKDSVVKPPTKTQVVGWPPVRSYRKNMVCIQKAADS 309
            +  +    +   +    +     S D   KPP K QVVGWPPVRS+RK+M+ +QK+++ 
Sbjct: 61  KEPGIDPNDNTKTISRENNLL---SADDPAKPPAKAQVVGWPPVRSFRKHMLTVQKSSNE 117

Query: 308 NKKKGDLESEKV-IGGTFVKVSVDGAPYLRKVDLNMYNTYQQLSDALGKMFSSFTIGKCG 132
                  E+EK+ +  TFVKVS+DGAPYLRKVDL MY +YQ+LSDALGKMFSSFTIG CG
Sbjct: 118 -------ETEKLGLNPTFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCG 170

Query: 131 SEGMMGFMNESKLMDLLNNSDYVPTYQDKDGDWMLVGDVPWDM 3
           S+GM  F+NESKL+DLLN +DYVPTY+DKDGDWMLVGDVPW M
Sbjct: 171 SQGMKDFLNESKLIDLLNGTDYVPTYEDKDGDWMLVGDVPWKM 213


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