BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003364
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su...    86   4e-15
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su...    86   4e-15
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...    85   7e-15
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...    77   2e-12
emb|CBI21412.3| unnamed protein product [Vitis vinifera]               75   7e-12

>ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 498

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 13/168 (7%)
 Frame = +2

Query: 14  RDDKGKNLLSDSIVDDVIAEFAPDEADREKRRKGNTNMFKKIAPISLISSVKSENMCVNG 193
           RDDK K L  DSIVDDVIAEFAPDE DRE+RRKG       +  ++ + +VKSE     G
Sbjct: 157 RDDKAKGLGCDSIVDDVIAEFAPDETDRERRRKGQIGAIPILRTVTSVPAVKSEGFTARG 216

Query: 194 VDLKFRNETSTDASKTCESLSSILRKGNV-----------SGEDKLDIAVDMGAVMNDNI 340
           ++L   ++   DA       + ++   ++           +GE K   + D+ + +N + 
Sbjct: 217 LNLTGESDFIKDAENGNSETTRVVTNSDLESVRGGVEVQGNGETKEFDSKDLNSQINLDP 276

Query: 341 AVGMDDSSTNRSVVEESLLNDIEVKREVQVKKDYV--LNAKVSNVEKD 478
              + +S     V  +++   +E K E  VKK+ V  LNAK+SN E+D
Sbjct: 277 VEQLPNSLIKEDVSGDTMPIKVETKAEPLVKKEPVSTLNAKISN-ERD 323


>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
           sativus]
          Length = 1547

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 13/168 (7%)
 Frame = +2

Query: 14  RDDKGKNLLSDSIVDDVIAEFAPDEADREKRRKGNTNMFKKIAPISLISSVKSENMCVNG 193
           RDDK K L  DSIVDDVIAEFAPDE DRE+RRKG       +  ++ + +VKSE     G
Sbjct: 157 RDDKAKGLGCDSIVDDVIAEFAPDETDRERRRKGQIGAIPILRTVTSVPAVKSEGFTARG 216

Query: 194 VDLKFRNETSTDASKTCESLSSILRKGNV-----------SGEDKLDIAVDMGAVMNDNI 340
           ++L   ++   DA       + ++   ++           +GE K   + D+ + +N + 
Sbjct: 217 LNLTGESDFIKDAENGNSETTRVVTNSDLESVRGGVEVQGNGETKEFDSKDLNSQINLDP 276

Query: 341 AVGMDDSSTNRSVVEESLLNDIEVKREVQVKKDYV--LNAKVSNVEKD 478
              + +S     V  +++   +E K E  VKK+ V  LNAK+SN E+D
Sbjct: 277 VEQLPNSLIKEDVSGDTMPIKVETKAEPLVKKEPVSTLNAKISN-ERD 323


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 71/186 (38%), Positives = 98/186 (52%), Gaps = 32/186 (17%)
 Frame = +2

Query: 2   FTKS---RDDKGKNLLSDSIVDDVIAEFAPDEADREKRRKGNTNMFK----KIAPISLIS 160
           FT S   RDDK +NL  DSIVDDVIAEFAPDEADRE+RR+GN+N  +     +A  +L+ 
Sbjct: 150 FTSSVFKRDDKTRNLSCDSIVDDVIAEFAPDEADRERRRRGNSNSLQASRSSVANPNLL- 208

Query: 161 SVKSENMCVNGVDLKFRNETSTDASKTCESLSSILRK----------------------G 274
           +VK+E +    VDL  R E     ++  ES+S  L +                       
Sbjct: 209 NVKTEKLGAGKVDLMTRQEVKRVTAQNGESISGGLPEISTDEGTGGLLKISTGEGNNSAR 268

Query: 275 NVSGEDKLDIAVD-MGAVMNDNIA-VGMDDSSTNRSVVEESLLNDIEVKREVQVK-KDYV 445
           N+   + LD  V+   AV +DN++ VG+ D  T        ++N  EVK E  V+ K + 
Sbjct: 269 NIQSSEVLDAEVEGEKAVKSDNLSTVGIRDGDT--------VVNCAEVKLEPLVESKVFA 320

Query: 446 LNAKVS 463
           LNAK+S
Sbjct: 321 LNAKIS 326


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2   FTKSRDDKGKNLLSDSIVDDVIAEFAPDEADREKRRKGNTNMFKKIAPISLISSVKSENM 181
           F KSRDDK K L  DSIVDDVIAEFAPDEADRE+RR+G + +          +++K E  
Sbjct: 151 FKKSRDDKVKGLSCDSIVDDVIAEFAPDEADRERRRRGQSGLVSGGRNFVPGTTIKMEIS 210

Query: 182 CVNGVDLKFRNETSTDASKTCESLSSILRKGNVSGEDKLDIAVDMGAVMNDNIAVGMDDS 361
                 +  R E +       +S+SS ++ GN+         V+   V+ ++     D +
Sbjct: 211 -----PISIRPEPTKVTIADGDSVSSSMQNGNM---------VEGKGVVKES----KDAN 252

Query: 362 STNRSVVEESLLNDIEVKREVQVKKDYV--LNAKVSNVEKD 478
             N   VEE++ + +E K E  VK+  V  LNAK+   EKD
Sbjct: 253 DLNCDAVEETVPDAVEDKSEQAVKRKEVHSLNAKIKE-EKD 292


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 62/161 (38%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2   FTKSRDDKGKNLLSDSIVDDVIAEFAPDEADREKRRKGNTNMFKKIAPISLISSVKSENM 181
           F KSRDDK K L  DSIVDDVIAEFAPDEADRE+RR+G + +            V     
Sbjct: 151 FKKSRDDKVKGLSCDSIVDDVIAEFAPDEADRERRRRGQSGL------------VSGGRN 198

Query: 182 CVNGVDLKFRNETSTDASKTCESLSSILRKGNVSGEDKLDIAVDMGAVMNDNIAVGMDDS 361
            V G  +K   E S  + +   +  +I    +VS   K     D+ + M+    V   D 
Sbjct: 199 FVPGTTIKM--EISPISIRPEPTKVTIADGDSVS---KTKDGKDLNSKMDAESIVQSHDP 253

Query: 362 STNRSVVEESLLNDIEVKREVQVKKDYV--LNAKVSNVEKD 478
            T    VEE++ + +E K E  VK+  V  LNAK+   EKD
Sbjct: 254 LTKVDAVEETVPDAVEDKSEQAVKRKEVHSLNAKIKE-EKD 293