BLASTX nr result
ID: Bupleurum21_contig00003352
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00003352
(2884 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276292.2| PREDICTED: uncharacterized protein LOC100262... 488 e-143
emb|CBI40456.3| unnamed protein product [Vitis vinifera] 488 e-143
ref|XP_002301386.1| predicted protein [Populus trichocarpa] gi|2... 481 e-143
emb|CAN69310.1| hypothetical protein VITISV_003086 [Vitis vinifera] 479 e-141
ref|XP_002320170.1| predicted protein [Populus trichocarpa] gi|2... 471 e-139
>ref|XP_002276292.2| PREDICTED: uncharacterized protein LOC100262009 [Vitis vinifera]
Length = 1026
Score = 488 bits (1257), Expect(2) = e-143
Identities = 240/380 (63%), Positives = 298/380 (78%), Gaps = 1/380 (0%)
Frame = +3
Query: 1743 VVLFQMFLPGSVTEKSGSNLLTQDRQVFDGDLSFLKEMGGLDFGQDIKFEPSKILAKFQK 1922
VVLFQMFLPG + EKSG +L + GDLSF+K +GGLDFG+ I+FEPSK+L KFQK
Sbjct: 58 VVLFQMFLPGLIMEKSGESLKNMENGY--GDLSFIKNIGGLDFGEGIRFEPSKLLQKFQK 115
Query: 1923 VDREGNGSYGVSKGLRFGYRKPQLAMVFADLLVDPQQIMMVTIAAALREIGYDIKVHSME 2102
E N S RFGYRKPQLA+VF DLLVDPQQ++MVT+A+AL E+GY I+V+S+E
Sbjct: 116 EADEVNLSSASRLRHRFGYRKPQLALVFPDLLVDPQQLLMVTVASALLEMGYTIQVYSLE 175
Query: 2103 DGPAHSVWRTLGVPVNIIQSTEKRNIAVDWLNYDGVLINNLEARRVIASLLQEPFKSIPL 2282
DGP +++WR +G PV II+S K VDWLNYDG+++N+LEAR V++ +QEPFKS+PL
Sbjct: 176 DGPVNAIWRNVGFPVTIIRSNAKSAAVVDWLNYDGIIVNSLEARGVVSCFVQEPFKSLPL 235
Query: 2283 IWTIHESTLAIRLRQYLSNGQIEFVDDWKRVFARATVVVYPNHVLPMLYSPCDTGNYFVI 2462
IWTI E TLA RLRQY G+IE V+DWK+VF RAT VV+PN+VLPM+YS D+GNYFVI
Sbjct: 236 IWTIPEGTLATRLRQYNLTGKIELVNDWKKVFNRATAVVFPNYVLPMIYSTFDSGNYFVI 295
Query: 2463 PGSPAEAWEVDHFMGSHQDSVREKMNFGSDDLVIAIAGSQLVYGGMWLEHALILQATLPL 2642
PGSPA+AWEVD+FM SH+DS R KM +G DD VIA+ SQ +Y G+WLEHALILQA LPL
Sbjct: 296 PGSPAQAWEVDNFMASHRDSPRVKMGYGPDDFVIALVRSQFLYKGLWLEHALILQALLPL 355
Query: 2643 LADFPSHNNSKTGIKVIVLSGDSTRNYSVAVEMIAMKLKYPTGTVKHIAIG-EDVDGVLS 2819
+A+FP NNS + +K+++ SG+S NYSVAVE IA+KL+YP G VKHIAI + D VL+
Sbjct: 356 VAEFPVDNNSNSHLKILITSGNSANNYSVAVEAIALKLRYPKGVVKHIAIDVGEADNVLA 415
Query: 2820 MVDLVIYGSFFEDQSFPDIL 2879
D+VIYGSF E+QSFPDIL
Sbjct: 416 AADIVIYGSFLEEQSFPDIL 435
Score = 50.8 bits (120), Expect(2) = e-143
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1
Query: 1663 QRPRSRFARFVLFKKIDYLQWVCTVAVLFFF 1755
QRP RF+RF+ F K+DYLQWVCTVAV FF
Sbjct: 27 QRPIVRFSRFLFFGKLDYLQWVCTVAVFCFF 57
>emb|CBI40456.3| unnamed protein product [Vitis vinifera]
Length = 1026
Score = 488 bits (1257), Expect(2) = e-143
Identities = 240/380 (63%), Positives = 298/380 (78%), Gaps = 1/380 (0%)
Frame = +3
Query: 1743 VVLFQMFLPGSVTEKSGSNLLTQDRQVFDGDLSFLKEMGGLDFGQDIKFEPSKILAKFQK 1922
VVLFQMFLPG + EKSG +L + GDLSF+K +GGLDFG+ I+FEPSK+L KFQK
Sbjct: 58 VVLFQMFLPGLIMEKSGESLKNMENGY--GDLSFIKNIGGLDFGEGIRFEPSKLLQKFQK 115
Query: 1923 VDREGNGSYGVSKGLRFGYRKPQLAMVFADLLVDPQQIMMVTIAAALREIGYDIKVHSME 2102
E N S RFGYRKPQLA+VF DLLVDPQQ++MVT+A+AL E+GY I+V+S+E
Sbjct: 116 EADEVNLSSASRLRHRFGYRKPQLALVFPDLLVDPQQLLMVTVASALLEMGYTIQVYSLE 175
Query: 2103 DGPAHSVWRTLGVPVNIIQSTEKRNIAVDWLNYDGVLINNLEARRVIASLLQEPFKSIPL 2282
DGP +++WR +G PV II+S K VDWLNYDG+++N+LEAR V++ +QEPFKS+PL
Sbjct: 176 DGPVNAIWRNVGFPVTIIRSNAKSAAVVDWLNYDGIIVNSLEARGVVSCFVQEPFKSLPL 235
Query: 2283 IWTIHESTLAIRLRQYLSNGQIEFVDDWKRVFARATVVVYPNHVLPMLYSPCDTGNYFVI 2462
IWTI E TLA RLRQY G+IE V+DWK+VF RAT VV+PN+VLPM+YS D+GNYFVI
Sbjct: 236 IWTIPEGTLATRLRQYNLTGKIELVNDWKKVFNRATAVVFPNYVLPMIYSTFDSGNYFVI 295
Query: 2463 PGSPAEAWEVDHFMGSHQDSVREKMNFGSDDLVIAIAGSQLVYGGMWLEHALILQATLPL 2642
PGSPA+AWEVD+FM SH+DS R KM +G DD VIA+ SQ +Y G+WLEHALILQA LPL
Sbjct: 296 PGSPAQAWEVDNFMASHRDSPRVKMGYGPDDFVIALVRSQFLYKGLWLEHALILQALLPL 355
Query: 2643 LADFPSHNNSKTGIKVIVLSGDSTRNYSVAVEMIAMKLKYPTGTVKHIAIG-EDVDGVLS 2819
+A+FP NNS + +K+++ SG+S NYSVAVE IA+KL+YP G VKHIAI + D VL+
Sbjct: 356 VAEFPVDNNSNSHLKILITSGNSANNYSVAVEAIALKLRYPKGVVKHIAIDVGEADNVLA 415
Query: 2820 MVDLVIYGSFFEDQSFPDIL 2879
D+VIYGSF E+QSFPDIL
Sbjct: 416 AADIVIYGSFLEEQSFPDIL 435
Score = 50.8 bits (120), Expect(2) = e-143
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1
Query: 1663 QRPRSRFARFVLFKKIDYLQWVCTVAVLFFF 1755
QRP RF+RF+ F K+DYLQWVCTVAV FF
Sbjct: 27 QRPIVRFSRFLFFGKLDYLQWVCTVAVFCFF 57
>ref|XP_002301386.1| predicted protein [Populus trichocarpa] gi|222843112|gb|EEE80659.1|
predicted protein [Populus trichocarpa]
Length = 990
Score = 481 bits (1239), Expect(2) = e-143
Identities = 238/381 (62%), Positives = 294/381 (77%), Gaps = 2/381 (0%)
Frame = +3
Query: 1743 VVLFQMFLPGSVTEKS--GSNLLTQDRQVFDGDLSFLKEMGGLDFGQDIKFEPSKILAKF 1916
VVLFQMFLPGSV EKS GS+ + ++ + DL +LKE+GGLDFG+DIKFEPSKIL KF
Sbjct: 65 VVLFQMFLPGSVVEKSELGSSPW-RGMELVNKDLLYLKEIGGLDFGEDIKFEPSKILQKF 123
Query: 1917 QKVDREGNGSYGVSKGLRFGYRKPQLAMVFADLLVDPQQIMMVTIAAALREIGYDIKVHS 2096
+K +RE N + RF YRKPQLA+VFADLLVDPQQ++MVT+A AL+EIGY I V++
Sbjct: 124 RKENREMNMPFTNGTLSRFPYRKPQLALVFADLLVDPQQLLMVTVATALQEIGYTIHVYT 183
Query: 2097 MEDGPAHSVWRTLGVPVNIIQSTEKRNIAVDWLNYDGVLINNLEARRVIASLLQEPFKSI 2276
+ DGP ++W+++G PV IIQ + K IAVDWLNYDG+L+N+LE R VI+ +QEPFKS+
Sbjct: 184 LRDGPVQNIWKSMGYPVTIIQMSHKLEIAVDWLNYDGILVNSLETRSVISCFMQEPFKSV 243
Query: 2277 PLIWTIHESTLAIRLRQYLSNGQIEFVDDWKRVFARATVVVYPNHVLPMLYSPCDTGNYF 2456
PLIWTIHE LAIR RQY S+ QIE ++DW++ F RATVVV+PNHVLPM+YS D GNY+
Sbjct: 244 PLIWTIHERALAIRSRQYTSSWQIELLNDWRKAFNRATVVVFPNHVLPMMYSAFDAGNYY 303
Query: 2457 VIPGSPAEAWEVDHFMGSHQDSVREKMNFGSDDLVIAIAGSQLVYGGMWLEHALILQATL 2636
VIPGSPAE WE D M + D +R KM + D+VIA+ GSQ +Y G+WLEHAL+L+A L
Sbjct: 304 VIPGSPAEVWEADTTMALYNDDIRVKMGYEPTDIVIAVVGSQFLYRGLWLEHALVLKALL 363
Query: 2637 PLLADFPSHNNSKTGIKVIVLSGDSTRNYSVAVEMIAMKLKYPTGTVKHIAIGEDVDGVL 2816
PLL DFP +NS + +K+IVLSGDST NYS AVE IA+ L YP GTVKH A+ DV L
Sbjct: 364 PLLQDFPLDSNSISHLKIIVLSGDSTGNYSAAVEAIAVNLSYPRGTVKHFAVDGDVSSAL 423
Query: 2817 SMVDLVIYGSFFEDQSFPDIL 2879
S VDLVIYGSF E+QSFP+ L
Sbjct: 424 SAVDLVIYGSFLEEQSFPEFL 444
Score = 56.2 bits (134), Expect(2) = e-143
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +1
Query: 1657 FGQRPRSRFARFVLFKKIDYLQWVCTVAVLFFF 1755
F RPRSR +RF+LFKK+DY+QW+CTVAV FF
Sbjct: 32 FLYRPRSRLSRFLLFKKLDYIQWICTVAVFLFF 64
>emb|CAN69310.1| hypothetical protein VITISV_003086 [Vitis vinifera]
Length = 1040
Score = 479 bits (1233), Expect(2) = e-141
Identities = 240/394 (60%), Positives = 299/394 (75%), Gaps = 15/394 (3%)
Frame = +3
Query: 1743 VVLFQMFLPGSVTEKSGSNLLTQDRQVFDGDLSFLKEMGGLDFGQDIKFEPSKILAKFQK 1922
VVLFQMFLPG + EKSG +L + GDLSF+K++GGLDFG+ I+FEPSK+L KFQK
Sbjct: 58 VVLFQMFLPGLIMEKSGESLKNMENGY--GDLSFIKKIGGLDFGEGIRFEPSKLLQKFQK 115
Query: 1923 VDREGNGSYGVSKGLRFGYRKPQLAMVFADLLVDPQQIMMVTIAAALREIGYDIK----- 2087
E N S RFGYRKPQLA+VF DLLVDPQQ++MVT+A+AL E+GY I+
Sbjct: 116 EADEVNLSSASRLRHRFGYRKPQLALVFPDLLVDPQQLLMVTVASALLEMGYTIQALPYL 175
Query: 2088 ---------VHSMEDGPAHSVWRTLGVPVNIIQSTEKRNIAVDWLNYDGVLINNLEARRV 2240
V+S+EDGP +++WR +G PV II+S K VDWLNYDG+++N+LEAR V
Sbjct: 176 VSIYVAWIQVYSLEDGPVNAIWRNVGFPVTIIRSNAKSAAVVDWLNYDGIIVNSLEARGV 235
Query: 2241 IASLLQEPFKSIPLIWTIHESTLAIRLRQYLSNGQIEFVDDWKRVFARATVVVYPNHVLP 2420
++ +QEPFKS+PLIWTI E TLA RLRQY G+IE V+DWK+VF RAT VV+PN+VLP
Sbjct: 236 VSCFVQEPFKSLPLIWTIPEGTLATRLRQYNLTGKIELVNDWKKVFNRATAVVFPNYVLP 295
Query: 2421 MLYSPCDTGNYFVIPGSPAEAWEVDHFMGSHQDSVREKMNFGSDDLVIAIAGSQLVYGGM 2600
M+YS D+GNYFVIPGSPA+AWEVD+FM SH+DS R KM +G DD VIA+ SQ +Y G+
Sbjct: 296 MIYSTFDSGNYFVIPGSPAQAWEVDNFMASHRDSPRVKMGYGPDDFVIALVRSQFLYKGL 355
Query: 2601 WLEHALILQATLPLLADFPSHNNSKTGIKVIVLSGDSTRNYSVAVEMIAMKLKYPTGTVK 2780
WLEHALILQA LPL+A+FP NNS + +K+++ SG+S NYSVAVE IA+KL+YP G VK
Sbjct: 356 WLEHALILQALLPLVAEFPVDNNSNSHLKILITSGNSANNYSVAVEAIALKLRYPKGVVK 415
Query: 2781 HIAIG-EDVDGVLSMVDLVIYGSFFEDQSFPDIL 2879
HIAI + D VL+ D+VIYGSF E+QSFPDIL
Sbjct: 416 HIAIDVGEADNVLAAADIVIYGSFLEEQSFPDIL 449
Score = 50.8 bits (120), Expect(2) = e-141
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1
Query: 1663 QRPRSRFARFVLFKKIDYLQWVCTVAVLFFF 1755
QRP RF+RF+ F K+DYLQWVCTVAV FF
Sbjct: 27 QRPIVRFSRFLFFGKLDYLQWVCTVAVFCFF 57
>ref|XP_002320170.1| predicted protein [Populus trichocarpa] gi|222860943|gb|EEE98485.1|
predicted protein [Populus trichocarpa]
Length = 990
Score = 471 bits (1212), Expect(2) = e-139
Identities = 234/381 (61%), Positives = 291/381 (76%), Gaps = 2/381 (0%)
Frame = +3
Query: 1743 VVLFQMFLPGSVTEKS--GSNLLTQDRQVFDGDLSFLKEMGGLDFGQDIKFEPSKILAKF 1916
VVLFQMFLPGSV EKS GS+ + ++ D DL +LKE+GGLDFG+DIKF+PSKIL F
Sbjct: 65 VVLFQMFLPGSVVEKSELGSSPW-RGMELVDKDLWYLKEIGGLDFGEDIKFQPSKILQHF 123
Query: 1917 QKVDREGNGSYGVSKGLRFGYRKPQLAMVFADLLVDPQQIMMVTIAAALREIGYDIKVHS 2096
+K +RE N S+ RF YRKPQLA+VFADLLVDP Q++MVT+A AL+EIGY I V+S
Sbjct: 124 RKENREMNMSFSNRTLSRFPYRKPQLALVFADLLVDPHQLLMVTVATALQEIGYTIHVYS 183
Query: 2097 MEDGPAHSVWRTLGVPVNIIQSTEKRNIAVDWLNYDGVLINNLEARRVIASLLQEPFKSI 2276
+ DGPA S+W+++ PVNIIQ + K IAVDWLNYDG+L+N+LE + V + +QEPFKS+
Sbjct: 184 LGDGPAQSIWKSMRSPVNIIQISHKMEIAVDWLNYDGILVNSLETKSVFSCFMQEPFKSV 243
Query: 2277 PLIWTIHESTLAIRLRQYLSNGQIEFVDDWKRVFARATVVVYPNHVLPMLYSPCDTGNYF 2456
PLIWTI+E TLA RQY S+ QIE + DW++ F RATVVV+PNHVLPM+YS DTGNY+
Sbjct: 244 PLIWTINERTLATHSRQYTSSWQIELLYDWRKAFNRATVVVFPNHVLPMMYSAFDTGNYY 303
Query: 2457 VIPGSPAEAWEVDHFMGSHQDSVREKMNFGSDDLVIAIAGSQLVYGGMWLEHALILQATL 2636
VIPGSPA+ WE + M + D + KM + DD+VIAI GSQ +Y G+WLEHAL+L+A L
Sbjct: 304 VIPGSPADIWETETTMALYNDEIHVKMGYEPDDIVIAIVGSQFLYRGLWLEHALVLKALL 363
Query: 2637 PLLADFPSHNNSKTGIKVIVLSGDSTRNYSVAVEMIAMKLKYPTGTVKHIAIGEDVDGVL 2816
PL A+F NNSK+ +K+I+LSGD T NYSVAVE IA L YP GTVKH A+ +DV L
Sbjct: 364 PLFAEFSLDNNSKSHLKIIILSGDPTGNYSVAVEAIAANLSYPRGTVKHFAVDDDVGSPL 423
Query: 2817 SMVDLVIYGSFFEDQSFPDIL 2879
DLVIYGSF E+QSFP+IL
Sbjct: 424 GAADLVIYGSFLEEQSFPEIL 444
Score = 53.9 bits (128), Expect(2) = e-139
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +1
Query: 1657 FGQRPRSRFARFVLFKKIDYLQWVCTVAVLFFF 1755
F RPRS F+RF+ FKK+DY+QW+CTVAV FF
Sbjct: 32 FLYRPRSSFSRFLRFKKLDYIQWICTVAVFLFF 64