BLASTX nr result

ID: Bupleurum21_contig00003329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003329
         (1819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 i...   479   e-132
ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 i...   478   e-132
ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|22352...   478   e-132
ref|NP_565923.1| putative ABC1 protein [Arabidopsis thaliana] gi...   463   e-128
gb|AAM62483.1| putative ABC1 protein [Arabidopsis thaliana]           461   e-127

>ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 isoform 1 [Vitis vinifera]
            gi|297736618|emb|CBI25489.3| unnamed protein product
            [Vitis vinifera]
          Length = 538

 Score =  479 bits (1233), Expect = e-132
 Identities = 234/306 (76%), Positives = 266/306 (86%)
 Frame = -2

Query: 1146 KELDFLVEAKNSVKCMDNFRKLSPRIADYVYAPKVYWNLSTSKLLTMEFIEGAQVNDPKS 967
            KELDFLVEAKNS KC+DNFRKLSP IA YVYAP VYWNL+TSKLLTMEFI+GAQVND K+
Sbjct: 233  KELDFLVEAKNSEKCVDNFRKLSPHIAHYVYAPMVYWNLTTSKLLTMEFIDGAQVNDVKT 292

Query: 966  IQGLGLRPADVANLLNRTFAEMMFRHGFVHCDPHEANLLVRRHPSMKKGIFGKSKPQLVL 787
            IQ LG+RP +VA L++  FA+MMF+HGFVHCDPH ANLLVR  PS ++   GK KPQLVL
Sbjct: 293  IQRLGIRPNEVARLVSEAFADMMFKHGFVHCDPHAANLLVRPMPSGERSFLGKRKPQLVL 352

Query: 786  LDHGLYKELDVSTRTNYAALWKALVFADANAIKENCVKLGAGDDLYPLFAGILTMRPWNR 607
            LDHGLYKELD  TR NYAALWK L+F+DANAIKEN VKLGAG+DLY LFAGILTMRPWNR
Sbjct: 353  LDHGLYKELDFHTRANYAALWKGLIFSDANAIKENSVKLGAGEDLYALFAGILTMRPWNR 412

Query: 606  VIDPAVDHLVIRGNAGDRSELQMYASQYFPEITELLRRLPRVILLMLKTNDCLRAVNNSL 427
            VID +VDHLV++G+ GDRSELQMYASQYFP+ITELLRRLPRVILLMLKTNDCLRAVNNSL
Sbjct: 413  VIDTSVDHLVVKGDEGDRSELQMYASQYFPQITELLRRLPRVILLMLKTNDCLRAVNNSL 472

Query: 426  LQKSSLESFLIIGRVSSEAVIEAKFLQNKSFLRWISAWFEGLSLEARMLVMQIALWIFQL 247
            LQ SSLE+F+IIG+V+SEAV EAK  Q +SFL WI+ W EG+ LEAR+  MQIALW+ Q+
Sbjct: 473  LQGSSLETFMIIGKVASEAVAEAKMSQRRSFLCWINVWLEGILLEARLFGMQIALWLLQV 532

Query: 246  RRTLVF 229
            R+ L +
Sbjct: 533  RKALTW 538


>ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 isoform 2 [Vitis vinifera]
          Length = 549

 Score =  478 bits (1231), Expect = e-132
 Identities = 234/309 (75%), Positives = 267/309 (86%)
 Frame = -2

Query: 1155 YHQKELDFLVEAKNSVKCMDNFRKLSPRIADYVYAPKVYWNLSTSKLLTMEFIEGAQVND 976
            Y  +ELDFLVEAKNS KC+DNFRKLSP IA YVYAP VYWNL+TSKLLTMEFI+GAQVND
Sbjct: 241  YGCQELDFLVEAKNSEKCVDNFRKLSPHIAHYVYAPMVYWNLTTSKLLTMEFIDGAQVND 300

Query: 975  PKSIQGLGLRPADVANLLNRTFAEMMFRHGFVHCDPHEANLLVRRHPSMKKGIFGKSKPQ 796
             K+IQ LG+RP +VA L++  FA+MMF+HGFVHCDPH ANLLVR  PS ++   GK KPQ
Sbjct: 301  VKTIQRLGIRPNEVARLVSEAFADMMFKHGFVHCDPHAANLLVRPMPSGERSFLGKRKPQ 360

Query: 795  LVLLDHGLYKELDVSTRTNYAALWKALVFADANAIKENCVKLGAGDDLYPLFAGILTMRP 616
            LVLLDHGLYKELD  TR NYAALWK L+F+DANAIKEN VKLGAG+DLY LFAGILTMRP
Sbjct: 361  LVLLDHGLYKELDFHTRANYAALWKGLIFSDANAIKENSVKLGAGEDLYALFAGILTMRP 420

Query: 615  WNRVIDPAVDHLVIRGNAGDRSELQMYASQYFPEITELLRRLPRVILLMLKTNDCLRAVN 436
            WNRVID +VDHLV++G+ GDRSELQMYASQYFP+ITELLRRLPRVILLMLKTNDCLRAVN
Sbjct: 421  WNRVIDTSVDHLVVKGDEGDRSELQMYASQYFPQITELLRRLPRVILLMLKTNDCLRAVN 480

Query: 435  NSLLQKSSLESFLIIGRVSSEAVIEAKFLQNKSFLRWISAWFEGLSLEARMLVMQIALWI 256
            NSLLQ SSLE+F+IIG+V+SEAV EAK  Q +SFL WI+ W EG+ LEAR+  MQIALW+
Sbjct: 481  NSLLQGSSLETFMIIGKVASEAVAEAKMSQRRSFLCWINVWLEGILLEARLFGMQIALWL 540

Query: 255  FQLRRTLVF 229
             Q+R+ L +
Sbjct: 541  LQVRKALTW 549


>ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|223526458|gb|EEF28733.1|
            ATATH9, putative [Ricinus communis]
          Length = 549

 Score =  478 bits (1231), Expect = e-132
 Identities = 238/308 (77%), Positives = 269/308 (87%)
 Frame = -2

Query: 1158 TYHQKELDFLVEAKNSVKCMDNFRKLSPRIADYVYAPKVYWNLSTSKLLTMEFIEGAQVN 979
            T   +ELDFLVEAKNS KC+ NFRKLSP IADYVYAPKV+WNLSTSKLLTMEFI+ AQVN
Sbjct: 238  TCDHQELDFLVEAKNSEKCLHNFRKLSPHIADYVYAPKVHWNLSTSKLLTMEFIDAAQVN 297

Query: 978  DPKSIQGLGLRPADVANLLNRTFAEMMFRHGFVHCDPHEANLLVRRHPSMKKGIFGKSKP 799
            D K+IQGLG++P +VA L+++TFAEMMF+HGFVHCDPH ANLLVR  PS ++ I GK KP
Sbjct: 298  DVKAIQGLGIQPCEVAKLVSQTFAEMMFKHGFVHCDPHAANLLVRPLPSDRRSILGKRKP 357

Query: 798  QLVLLDHGLYKELDVSTRTNYAALWKALVFADANAIKENCVKLGAGDDLYPLFAGILTMR 619
            QL+LLDHGLYKELD +TR NYAALWKALVFADA++IKEN VKLGAG+DLY LFAGILTMR
Sbjct: 358  QLILLDHGLYKELDFTTRFNYAALWKALVFADAHSIKENSVKLGAGEDLYALFAGILTMR 417

Query: 618  PWNRVIDPAVDHLVIRGNAGDRSELQMYASQYFPEITELLRRLPRVILLMLKTNDCLRAV 439
            PWNRV+D AVDHLVI+GN  +RSELQMYASQYFP+I+ELLRRLPRVILLMLKTNDCLRAV
Sbjct: 418  PWNRVVDSAVDHLVIQGNDNERSELQMYASQYFPQISELLRRLPRVILLMLKTNDCLRAV 477

Query: 438  NNSLLQKSSLESFLIIGRVSSEAVIEAKFLQNKSFLRWISAWFEGLSLEARMLVMQIALW 259
            NNSLLQ  SLE+F IIG+VSSEAVIEAK LQ KSFL  +  W E + LEAR+L MQIALW
Sbjct: 478  NNSLLQGYSLETFFIIGKVSSEAVIEAKKLQRKSFLSRLDIWLEEILLEARLLAMQIALW 537

Query: 258  IFQLRRTL 235
            + Q+RR L
Sbjct: 538  LLQVRRAL 545


>ref|NP_565923.1| putative ABC1 protein [Arabidopsis thaliana]
            gi|49066033|sp|O04212.2|Y2090_ARATH RecName:
            Full=Putative ABC1 protein At2g40090; Flags: Precursor
            gi|51969458|dbj|BAD43421.1| ABC transporter like protein
            [Arabidopsis thaliana] gi|51970216|dbj|BAD43800.1| ABC
            transporter like protein [Arabidopsis thaliana]
            gi|330254682|gb|AEC09776.1| putative ABC1 protein
            [Arabidopsis thaliana]
          Length = 538

 Score =  463 bits (1191), Expect = e-128
 Identities = 224/304 (73%), Positives = 265/304 (87%)
 Frame = -2

Query: 1146 KELDFLVEAKNSVKCMDNFRKLSPRIADYVYAPKVYWNLSTSKLLTMEFIEGAQVNDPKS 967
            KELDFLVEAKN+ KC+DNFRKLSP IA+YVYAP +YWNLSTSKLLTMEF++GAQVND   
Sbjct: 233  KELDFLVEAKNNEKCLDNFRKLSPHIAEYVYAPTIYWNLSTSKLLTMEFMDGAQVNDVDK 292

Query: 966  IQGLGLRPADVANLLNRTFAEMMFRHGFVHCDPHEANLLVRRHPSMKKGIFGKSKPQLVL 787
            I+ LG++P +V+ L+++TFAEMMF+HGFVHCDPH ANL+VR  PS K+ I+GK KPQLV+
Sbjct: 293  IRKLGIQPYEVSKLVSQTFAEMMFKHGFVHCDPHAANLIVRPDPSGKRNIYGKRKPQLVI 352

Query: 786  LDHGLYKELDVSTRTNYAALWKALVFADANAIKENCVKLGAGDDLYPLFAGILTMRPWNR 607
            LDHGLYKELD +TR NYA+LWKALVF+DA AIKE+  KLGAGDDLY LFAGILTMRPW +
Sbjct: 353  LDHGLYKELDFNTRFNYASLWKALVFSDAKAIKEHSEKLGAGDDLYVLFAGILTMRPWKQ 412

Query: 606  VIDPAVDHLVIRGNAGDRSELQMYASQYFPEITELLRRLPRVILLMLKTNDCLRAVNNSL 427
            VID +VDHLVI+GN  D SELQMYASQYF EI+ELLRRLPRVILLMLKTNDCLR+VNN L
Sbjct: 413  VIDTSVDHLVIQGNKEDVSELQMYASQYFSEISELLRRLPRVILLMLKTNDCLRSVNNEL 472

Query: 426  LQKSSLESFLIIGRVSSEAVIEAKFLQNKSFLRWISAWFEGLSLEARMLVMQIALWIFQL 247
            +Q SSLESFLIIG+VSS+AV+EAK  + KS ++W+  WFEG S+EAR+ VMQ ALWI Q+
Sbjct: 473  MQGSSLESFLIIGKVSSQAVLEAKRAEKKSLMKWLKVWFEGFSVEARLWVMQFALWILQV 532

Query: 246  RRTL 235
            R++L
Sbjct: 533  RKSL 536


>gb|AAM62483.1| putative ABC1 protein [Arabidopsis thaliana]
          Length = 538

 Score =  461 bits (1185), Expect = e-127
 Identities = 223/304 (73%), Positives = 264/304 (86%)
 Frame = -2

Query: 1146 KELDFLVEAKNSVKCMDNFRKLSPRIADYVYAPKVYWNLSTSKLLTMEFIEGAQVNDPKS 967
            KELDFLVEAKN+ KC+DNFRKLSP IA+YVYAP +YWNLSTSKLLTMEF++GAQVND   
Sbjct: 233  KELDFLVEAKNNEKCLDNFRKLSPHIAEYVYAPTIYWNLSTSKLLTMEFMDGAQVNDVDK 292

Query: 966  IQGLGLRPADVANLLNRTFAEMMFRHGFVHCDPHEANLLVRRHPSMKKGIFGKSKPQLVL 787
            I+ LG++P +V+ L+++TFAEMMF+HGFVHCDPH ANL+VR  PS K+ I+GK KPQLV+
Sbjct: 293  IRKLGIQPYEVSKLVSQTFAEMMFKHGFVHCDPHAANLIVRPDPSGKRNIYGKRKPQLVI 352

Query: 786  LDHGLYKELDVSTRTNYAALWKALVFADANAIKENCVKLGAGDDLYPLFAGILTMRPWNR 607
            LDHGLYKELD +TR NYA+LWKALVF+DA AIKE+  KLGAGDDLY LFAGILTMRPW +
Sbjct: 353  LDHGLYKELDFNTRFNYASLWKALVFSDAKAIKEHSEKLGAGDDLYVLFAGILTMRPWKQ 412

Query: 606  VIDPAVDHLVIRGNAGDRSELQMYASQYFPEITELLRRLPRVILLMLKTNDCLRAVNNSL 427
            VID +VDHLVI+GN  D SELQMYASQYF EI+ELLRRLPRVILLMLKTNDCLR+VNN L
Sbjct: 413  VIDTSVDHLVIQGNKEDVSELQMYASQYFSEISELLRRLPRVILLMLKTNDCLRSVNNEL 472

Query: 426  LQKSSLESFLIIGRVSSEAVIEAKFLQNKSFLRWISAWFEGLSLEARMLVMQIALWIFQL 247
            +Q SSLESFLIIG+VSS+AV+EAK  + KS ++W+  W EG S+EAR+ VMQ ALWI Q+
Sbjct: 473  MQGSSLESFLIIGKVSSQAVLEAKRAEKKSLMKWLKVWLEGFSVEARLWVMQFALWILQV 532

Query: 246  RRTL 235
            R++L
Sbjct: 533  RKSL 536


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