BLASTX nr result
ID: Bupleurum21_contig00003328
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00003328
(1774 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246... 550 e-154
ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, ... 543 e-152
ref|XP_002308799.1| predicted protein [Populus trichocarpa] gi|2... 535 e-149
ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795... 534 e-149
ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C,... 531 e-148
>ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
Length = 478
Score = 550 bits (1416), Expect = e-154
Identities = 289/483 (59%), Positives = 349/483 (72%), Gaps = 6/483 (1%)
Frame = -1
Query: 1774 MEMEPGKLFIGGISWDTNEERLKEYFQTFGAVLEAVIMKDRTTGRARGFGFVVFADPAVA 1595
M+ + GKLFIGGISWDTNE+RLK+YF +G V+EAVIMKDRTTGRARGFGFVVFADPAVA
Sbjct: 1 MQSDLGKLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVA 60
Query: 1594 ERVVKEKHMIDGRTVEAKKAVPRDGQLTPNRISGSVQGSPSPARTKKIFVGGLASTVTES 1415
ERV+KEKH IDGR VEAKKAVP+D Q +R SGS+ GSP P RT+KIFVGGLASTVTES
Sbjct: 61 ERVIKEKHNIDGRMVEAKKAVPKDDQSILSRNSGSIHGSPGPGRTRKIFVGGLASTVTES 120
Query: 1414 DFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITFDSEEAVDRVLLRTFHELNGKMVEVKR 1235
DFK YFDQFG ITDVVVMYDHNTQRPRGFGFIT++SEEAVD+VLL+TFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKR 180
Query: 1234 AVPKELSPGPIRXXXXXXXXXSYGMSRVSNLLNAYTQGYSPSPIGGYGLRMDGRFSPAAV 1055
AVPKELSPGPIR +YG+SRV++ L+AY QGY+PS +GGYG+RMDGRFSP A
Sbjct: 181 AVPKELSPGPIR---SQLGGFNYGLSRVNSFLSAYNQGYAPSTVGGYGVRMDGRFSPIAG 237
Query: 1054 GRSGY-----SYGVGPNFEAGLGPNLEGAGHLVSNINYGRGLNTFQNGSPNRYDSPVXXX 890
GRSG+ YG+G NFE GL + G+ + +N+NYGRGLN + G+ NR++S +
Sbjct: 238 GRSGFPPFGSGYGMGMNFEPGLSQSYGGSANFNNNLNYGRGLNPYYIGNTNRFNSTIGYD 297
Query: 889 XXXXXXGSVFNSMNQTPWGDGSLNYGKNSANSAELIGSGSRNTGLINALDNIGAIWGSPP 710
S F+S + WG+G LN+G NSA S+ GS S TG A N G WGS
Sbjct: 298 GGNGGNSSFFSSATRNLWGNGGLNFGTNSATSSAFTGSASGTTG-GGAFGNSGTSWGSSL 356
Query: 709 ISGQERGINSPFSNVNNDYGNADSSFELGGLGYSRNTRGNLAPSLASSFATANSGRDXXX 530
IS Q G N ++ N YG DSS+ LG GY RN+ ++AP+ SS+A +NSG D
Sbjct: 357 ISAQGGGSNISSNSGNLGYGGGDSSYGLGVGGYGRNSGTSVAPT--SSYAASNSGYDGAL 414
Query: 529 XXXXXXXXXXGDTTWRSSSPDLEGAQTFGYDLRNAVSEVAPRNAIGYVDGYSVANR-TNR 353
GD+TWR S+ + +G+ +FGY L NA S+V +++ GYV GYSV R +NR
Sbjct: 415 AEFYSGGSVYGDSTWRPSNAERDGSGSFGYGLGNAASDVPAKSSPGYVGGYSVTKRQSNR 474
Query: 352 GIA 344
GIA
Sbjct: 475 GIA 477
>ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula] gi|355519311|gb|AET00935.1|
Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like
protein [Medicago truncatula]
Length = 479
Score = 543 bits (1399), Expect = e-152
Identities = 291/485 (60%), Positives = 341/485 (70%), Gaps = 7/485 (1%)
Frame = -1
Query: 1774 MEMEPGKLFIGGISWDTNEERLKEYFQTFGAVLEAVIMKDRTTGRARGFGFVVFADPAVA 1595
M+ + GKLFIGGISWDTNEERL+EYF T+G V EAVIMKDRTTGRARGFGFVVF DPAVA
Sbjct: 1 MQSDSGKLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVA 60
Query: 1594 ERVVKEKHMIDGRTVEAKKAVPRDGQLTPNRISGSVQGSPSPARTKKIFVGGLASTVTES 1415
+ VV+EKH IDGR VEAKKAVPRD Q +R SGS+ GSP P RT+KIFVGGLASTVTES
Sbjct: 61 DIVVQEKHNIDGRMVEAKKAVPRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTES 120
Query: 1414 DFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITFDSEEAVDRVLLRTFHELNGKMVEVKR 1235
DFK YFDQFGTITDVVVMYDHNTQRPRGFGFIT+DSEEAVD+VLL+TFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKR 180
Query: 1234 AVPKELSPGPIRXXXXXXXXXSYGMSRVSNLLNAYTQGYSPSPIGGYGLRMDGRFSPAAV 1055
AVPKELSPGP R +YG+SRV++ LN + Q YSPS +GGYGLR+DGRFSP A
Sbjct: 181 AVPKELSPGPAR---SPLSGYNYGLSRVNSFLNGFNQSYSPSTVGGYGLRVDGRFSPVAG 237
Query: 1054 GRSGYS-----YGVGPNFEAGLGPNLEGAGHLVSNINYGRGLNTFQNGSPNRYDSPVXXX 890
GR+ Y+ YG+G NFE GL P G N++YGRGLN + G NR+ SPV
Sbjct: 238 GRNAYAPFGSGYGMGMNFEPGLSPGFGGNASFNGNLSYGRGLNPYFIGGSNRFGSPVGYE 297
Query: 889 XXXXXXGSVFNSMNQTPWGDGSLNYGKNSANSAELIGSGSRNTGLINALDNIGAIWGSPP 710
S F+S+ + WG+GSLNYG +SANS IGSGS N G NA N G W S P
Sbjct: 298 SGNGGSNSFFSSVTRNLWGNGSLNYGTSSANSNAYIGSGSGNVG-GNAFGNTGVNWSSSP 356
Query: 709 ISGQERGINSPFSNVNNDYGNADSSFELGGLGYSRNTRGNLAPSLASSFATANSGR-DXX 533
ISG G N + N YG ++ + LG GY R++ LAP+ SS++T+N G D
Sbjct: 357 ISGHGGGNNVSQGSGNLGYGGGNNGYGLGTEGYGRSSGSTLAPT--SSYSTSNGGGVDGA 414
Query: 532 XXXXXXXXXXXGDTTWRSSSPDLEGAQTFGYDLRNAVSEVAPRNAIGYVDGYSVANR-TN 356
GDTTWRSS+ + +G+ FGY L A S+V+ + + GYV GY+V R N
Sbjct: 415 FADFYNNNSVYGDTTWRSSNSERDGSGPFGYGLGGAPSDVSAKTSPGYVGGYTVNKRQPN 474
Query: 355 RGIAT 341
RGI T
Sbjct: 475 RGITT 479
>ref|XP_002308799.1| predicted protein [Populus trichocarpa] gi|222854775|gb|EEE92322.1|
predicted protein [Populus trichocarpa]
Length = 476
Score = 535 bits (1378), Expect = e-149
Identities = 287/483 (59%), Positives = 345/483 (71%), Gaps = 6/483 (1%)
Frame = -1
Query: 1774 MEMEPGKLFIGGISWDTNEERLKEYFQTFGAVLEAVIMKDRTTGRARGFGFVVFADPAVA 1595
MEME GKLFIGGISWDTNE+RLKEYF+ FG VLEAVIMKDR TGRARGFGFVVFADPAVA
Sbjct: 1 MEMELGKLFIGGISWDTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVA 60
Query: 1594 ERVVKEKHMIDGRTVEAKKAVPRDGQLTPNRISGSVQGSPSPARTKKIFVGGLASTVTES 1415
ERVV EKH+IDGR VEAKKAVPR+ Q T N+ S SV GSP PARTKKIFVGGLASTVTES
Sbjct: 61 ERVVMEKHLIDGRNVEAKKAVPREDQNTLNKNSSSVNGSPGPARTKKIFVGGLASTVTES 120
Query: 1414 DFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITFDSEEAVDRVLLRTFHELNGKMVEVKR 1235
DF+ YFDQFG ITDVVVMYDHNTQRPRGFGFIT+DSEEAVDRVL +TFHELNGKMVEVKR
Sbjct: 121 DFRKYFDQFGVITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180
Query: 1234 AVPKELSPGPIRXXXXXXXXXSYGMSRVSNLLNAYTQGYSPSPIGGYGLRMDGRFSPAAV 1055
AVPKELSPGP R +Y SRVS+ LN YTQGY+PS +GGYG+RMDGRFSP
Sbjct: 181 AVPKELSPGPAR---NQLGGFNYSPSRVSSFLNGYTQGYNPSFVGGYGVRMDGRFSPVTA 237
Query: 1054 GRSGYS-----YGVGPNFEAGLGPNLEGAGHLVSNINYGRGLNTFQNGSPNRYDSPVXXX 890
GRS +S YG+G NFE L P G ++ SN YGR ++ +G+ +RY +P+
Sbjct: 238 GRSNFSPFGSGYGMGLNFEQVLNPVYGGNSNISSNAGYGR-VSPSYSGNASRYSNPIGFS 296
Query: 889 XXXXXXGSVFNSMNQTPWGDGSLNYGKNSANSAELIGSGSRNTGLINALDNIGAIWGSPP 710
SV N + + WG+GS+N+ N+ NS+ + SG+ ++G+ + ++GA+WGS
Sbjct: 297 GGNGGSSSVLNPIAHSLWGNGSINHASNTTNSSSFMSSGTGSSGM-GSFSSMGALWGSSA 355
Query: 709 ISGQERGINSPFSNVNNDYGNADSSFELGGLGYSRNTRGNLAPSLASSFATANSGRDXXX 530
S Q G+ + S+ N +G D L G+GY RN+R +AP ASS A +N G D
Sbjct: 356 NSEQGGGVRAVNSS-NLSFGGGDFDIGLEGVGYGRNSRTGVAP--ASSHAASNGGYDGAY 412
Query: 529 XXXXXXXXXXGDTTWRSSSPDLEGAQTFGYDLRNAVSEVAPRNAIGYVDGYSVANR-TNR 353
GD TW+SS +L+ + +FG+ L NA S+V +N+ GYV GYSVANR +NR
Sbjct: 413 ADFYEKGSLYGDNTWQSSPSELDVSGSFGFGLGNATSDVMTKNSAGYVGGYSVANRQSNR 472
Query: 352 GIA 344
GIA
Sbjct: 473 GIA 475
>ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
Length = 479
Score = 534 bits (1375), Expect = e-149
Identities = 285/485 (58%), Positives = 345/485 (71%), Gaps = 7/485 (1%)
Frame = -1
Query: 1774 MEMEPGKLFIGGISWDTNEERLKEYFQTFGAVLEAVIMKDRTTGRARGFGFVVFADPAVA 1595
M+ + GKLFIGGISWDTNEERL+EYF T+G V+EAVIMKDRTTGRARGFGFVVF+DPA+A
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAIA 60
Query: 1594 ERVVKEKHMIDGRTVEAKKAVPRDGQLTPNRISGSVQGSPSPARTKKIFVGGLASTVTES 1415
E V+KEKH IDGR VEAKKAVPRD Q +R SGS+ GSP P RT+KIFVGGLASTVTES
Sbjct: 61 EIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTES 120
Query: 1414 DFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITFDSEEAVDRVLLRTFHELNGKMVEVKR 1235
DFK YFDQFGTITDVVVMYDHNTQRPRGFGFIT+DSEEAVD+VLL+TFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR 180
Query: 1234 AVPKELSPGPIRXXXXXXXXXSYGMSRVSNLLNAYTQGYSPSPIGGYGLRMDGRFSPAAV 1055
AVPKELSPGP R +YG++RV++ LN +TQGY+PS +GGYGLR D RFSP A
Sbjct: 181 AVPKELSPGPSR---TPLGGYNYGLTRVNSFLNGFTQGYTPSTVGGYGLRADDRFSPVAG 237
Query: 1054 GRSGYS-----YGVGPNFEAGLGPNLEGAGHLVSNINYGRGLNTFQNGSPNRYDSPVXXX 890
GRSG++ YG+ NFE GL G + SN++Y RG+N + GS NR+ SPV
Sbjct: 238 GRSGFAPFGSGYGMSMNFEPGLNAGFGGNANFNSNLSYDRGINPYFIGSSNRFGSPVGYE 297
Query: 889 XXXXXXGSVFNSMNQTPWGDGSLNYGKNSANSAELIGSGSRNTGLINALDNIGAIWGSPP 710
S F+S+ + WG+G L+YG +SANS IGSGS + G N N G W S
Sbjct: 298 SGNGGNNSFFSSVTRNLWGNGGLSYGTSSANSNAYIGSGSGSAG-GNTFGNTGVNWSSSA 356
Query: 709 ISGQERGINS-PFSNVNNDYGNADSSFELGGLGYSRNTRGNLAPSLASSFATANSGRDXX 533
ISGQ+ G N+ S+ N YG D+++ LG GY R++ AP+ SS++ +N G D
Sbjct: 357 ISGQQGGGNNMSQSSGNLGYGGGDNNYGLGTGGYGRSSGAIFAPT--SSYSASNGGVDGA 414
Query: 532 XXXXXXXXXXXGDTTWRSSSPDLEGAQTFGYDLRNAVSEVAPRNAIGYVDGYSVANR-TN 356
GD TWRSS+ + +G+ FGY L A S+V+ +++ GYV GY+V R N
Sbjct: 415 FADFYNNSSVYGDPTWRSSNSERDGSGPFGYGLGGAASDVSAKSSPGYVGGYTVNKRQPN 474
Query: 355 RGIAT 341
RGIAT
Sbjct: 475 RGIAT 479
>ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis] gi|223532357|gb|EEF34155.1| Heterogeneous
nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 456
Score = 531 bits (1369), Expect = e-148
Identities = 289/484 (59%), Positives = 342/484 (70%), Gaps = 7/484 (1%)
Frame = -1
Query: 1774 MEMEPGKLFIGGISWDTNEERLKEYFQTFGAVLEAVIMKDRTTGRARGFGFVVFADPAVA 1595
MEME GKLFIGGISWDTNE+RL+EYFQ FG V+EAVIMKDR TGRARGFGFVVFADPAVA
Sbjct: 1 MEMELGKLFIGGISWDTNEDRLREYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVA 60
Query: 1594 ERVVKEKHMIDGRTVEAKKAVPRDGQLTPNR-ISGSVQGSPSPARTKKIFVGGLASTVTE 1418
ERVV EKH+IDGR VEAKKAVPR+ Q NR S S+ GSPSPARTKKIFVGGLASTVTE
Sbjct: 61 ERVVMEKHLIDGRNVEAKKAVPREDQNILNRNSSSSIHGSPSPARTKKIFVGGLASTVTE 120
Query: 1417 SDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITFDSEEAVDRVLLRTFHELNGKMVEVK 1238
SDFK YFDQFGTITDVVVMYDHNTQRPRGFGFIT+DSEEAVD+VL +TFHELNGKMVEVK
Sbjct: 121 SDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLHKTFHELNGKMVEVK 180
Query: 1237 RAVPKELSPGPIRXXXXXXXXXSYGMSRVSNLLNAYTQGYSPSPIGGYGLRMDGRFSPAA 1058
RAVPKELSPGP R +YG +RV + L++YTQGYSP+ GG G+RMDGRFSPA
Sbjct: 181 RAVPKELSPGPTR---TQLNGYNYGPNRVGSFLSSYTQGYSPNSTGGLGVRMDGRFSPAT 237
Query: 1057 VGRSGYS-----YGVGPNFEAGLGPNLEGAGHLVSNINYGRGLNTFQNGSPNRYDSPVXX 893
VGRS +S +G+G N+E GL P+ G +L SN+ YGR L+ NG+ +RYDSP+
Sbjct: 238 VGRSNFSPFGPGFGMGLNYEQGLSPSYGGNSNLSSNLGYGR-LSPSYNGNSSRYDSPIGY 296
Query: 892 XXXXXXXGSVFNSMNQTPWGDGSLNYGKNSANSAELIGSGSRNTGLINALDNIGAIWGSP 713
SV NS +T WG+G++N+ NS NS+ +GSG+ N G I + +IGA+WGS
Sbjct: 297 NGGNVGNSSVLNSPARTLWGNGTINHSSNSTNSSSFLGSGTGNPG-IGSFGSIGALWGSS 355
Query: 712 PISGQERGINSPFSNVNNDYGNADSSFELGGLGYSRNTRGNLAPSLASSFATANSGRDXX 533
SGQ GG+GY RN+ ++AP SS +N G +
Sbjct: 356 ASSGQGG----------------------GGIGYGRNSGTSVAP--VSSHTASNDGYNGP 391
Query: 532 XXXXXXXXXXXGDTTWRSSSPDLEGAQTFGYDLRNAVSEVAPRNAIGYVDGYSVANR-TN 356
GD+ WRSS +LEG+ +FG+ L NA S+V +N+ GYV GYSVA+R N
Sbjct: 392 YGDIYENISLYGDSAWRSSPLELEGSGSFGFGLGNAASDVVTKNSAGYVGGYSVASRQAN 451
Query: 355 RGIA 344
RGIA
Sbjct: 452 RGIA 455