BLASTX nr result

ID: Bupleurum21_contig00003318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003318
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533227.1| translation initiation factor if-3, putative...   231   1e-58
ref|XP_002276984.1| PREDICTED: translation initiation factor IF-...   230   2e-58
ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|2...   228   9e-58
ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   228   1e-57
ref|XP_004144726.1| PREDICTED: translation initiation factor IF-...   228   1e-57

>ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis]
           gi|223526947|gb|EEF29148.1| translation initiation
           factor if-3, putative [Ricinus communis]
          Length = 274

 Score =  231 bits (590), Expect = 1e-58
 Identities = 116/167 (69%), Positives = 138/167 (82%)
 Frame = +1

Query: 1   LNISAIRSDTVRLIDDKQNMIGIMPKIEALQRAEDAELDLVILSPDADPPVVRLMDYNKF 180
           L+IS IRS TVRLID++QNM+G++PK EA+Q AE+A LDLVILSPDADPPVVR+MDYNK+
Sbjct: 85  LDISTIRSATVRLIDEQQNMVGVVPKSEAIQMAENAALDLVILSPDADPPVVRIMDYNKY 144

Query: 181 XXXXXXXXXXXXXXSAAHRMDLKELKMGYNIDVHDYTVRLKAAHKFLKAGDKVKVIVNLK 360
                         SAA RMDLKELKMGYNID HDY VRL+AA KFLK GDKVKVIVNLK
Sbjct: 145 RYELQKKKKGQQKKSAATRMDLKELKMGYNIDQHDYDVRLRAARKFLKDGDKVKVIVNLK 204

Query: 361 GRESDFRNKAIELIRRFQNDIGELAVEESKSFRERSMTLVMVPNKAV 501
           GRE++FRN AIELIRRFQND+GELA EE+K+FR+R++ + + PNKA+
Sbjct: 205 GRENEFRNIAIELIRRFQNDVGELATEETKNFRDRNIFITLAPNKAI 251


>ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera]
           gi|297743667|emb|CBI36550.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  230 bits (587), Expect = 2e-58
 Identities = 114/167 (68%), Positives = 141/167 (84%)
 Frame = +1

Query: 1   LNISAIRSDTVRLIDDKQNMIGIMPKIEALQRAEDAELDLVILSPDADPPVVRLMDYNKF 180
           L++S+IRS +VRLID++QNM+G++ K +A+Q AEDAELDLV+LSPDADPPVVR+MDYNK+
Sbjct: 83  LDVSSIRSASVRLIDEQQNMVGVVSKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKY 142

Query: 181 XXXXXXXXXXXXXXSAAHRMDLKELKMGYNIDVHDYTVRLKAAHKFLKAGDKVKVIVNLK 360
                         SAA+RMDLKELKMGYNID HDY+VRLKAA KFL+ GDKVK+IVNLK
Sbjct: 143 RYELQKKKRGQQKKSAANRMDLKELKMGYNIDSHDYSVRLKAARKFLQDGDKVKIIVNLK 202

Query: 361 GRESDFRNKAIELIRRFQNDIGELAVEESKSFRERSMTLVMVPNKAV 501
           GRE++FRN AIELIRRFQND+GELA EESK+F  R++ +V+VPNKA+
Sbjct: 203 GRENEFRNIAIELIRRFQNDVGELATEESKNFSVRNIFIVLVPNKAL 249


>ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|222866557|gb|EEF03688.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score =  228 bits (582), Expect = 9e-58
 Identities = 115/167 (68%), Positives = 136/167 (81%)
 Frame = +1

Query: 1   LNISAIRSDTVRLIDDKQNMIGIMPKIEALQRAEDAELDLVILSPDADPPVVRLMDYNKF 180
           LNIS+IRS TVRLID +QNM+G++   +A+Q AED EL+LVI+SPDADPPVVR+MDYNKF
Sbjct: 89  LNISSIRSATVRLIDQQQNMVGVVTVRDAIQMAEDTELNLVIVSPDADPPVVRIMDYNKF 148

Query: 181 XXXXXXXXXXXXXXSAAHRMDLKELKMGYNIDVHDYTVRLKAAHKFLKAGDKVKVIVNLK 360
                         SAA RMDLKELKMGYNID HDY VRL+AA KFLK GDKVKVIVNLK
Sbjct: 149 RYEQQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYDVRLRAARKFLKDGDKVKVIVNLK 208

Query: 361 GRESDFRNKAIELIRRFQNDIGELAVEESKSFRERSMTLVMVPNKAV 501
           GRE++FRN AIEL+RRFQND+GELA EESK+FR+R+  + +VPNKA+
Sbjct: 209 GRENEFRNNAIELLRRFQNDVGELATEESKNFRDRNAFITLVPNKAL 255


>ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor
           IF-3-like [Cucumis sativus]
          Length = 299

 Score =  228 bits (581), Expect = 1e-57
 Identities = 115/167 (68%), Positives = 139/167 (83%)
 Frame = +1

Query: 1   LNISAIRSDTVRLIDDKQNMIGIMPKIEALQRAEDAELDLVILSPDADPPVVRLMDYNKF 180
           L+ISAI+S  VRLID +QNM+G++ K +A+Q AEDAELDLV++SPDADPPVVR+MDYNK+
Sbjct: 110 LDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKY 169

Query: 181 XXXXXXXXXXXXXXSAAHRMDLKELKMGYNIDVHDYTVRLKAAHKFLKAGDKVKVIVNLK 360
                         SAA RMDLKELKMGYNID HDY+VRLKAA KFLK GDKVKVIVNLK
Sbjct: 170 RYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLK 229

Query: 361 GRESDFRNKAIELIRRFQNDIGELAVEESKSFRERSMTLVMVPNKAV 501
           GRE++FRN AIELIRRFQ ++GELA EE+K+FR+R++ +V+VPNKAV
Sbjct: 230 GRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAV 276


>ref|XP_004144726.1| PREDICTED: translation initiation factor IF-3-like [Cucumis
           sativus]
          Length = 299

 Score =  228 bits (581), Expect = 1e-57
 Identities = 115/167 (68%), Positives = 139/167 (83%)
 Frame = +1

Query: 1   LNISAIRSDTVRLIDDKQNMIGIMPKIEALQRAEDAELDLVILSPDADPPVVRLMDYNKF 180
           L+ISAI+S  VRLID +QNM+G++ K +A+Q AEDAELDLV++SPDADPPVVR+MDYNK+
Sbjct: 110 LDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKY 169

Query: 181 XXXXXXXXXXXXXXSAAHRMDLKELKMGYNIDVHDYTVRLKAAHKFLKAGDKVKVIVNLK 360
                         SAA RMDLKELKMGYNID HDY+VRLKAA KFLK GDKVKVIVNLK
Sbjct: 170 RYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLK 229

Query: 361 GRESDFRNKAIELIRRFQNDIGELAVEESKSFRERSMTLVMVPNKAV 501
           GRE++FRN AIELIRRFQ ++GELA EE+K+FR+R++ +V+VPNKAV
Sbjct: 230 GRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAV 276