BLASTX nr result
ID: Bupleurum21_contig00003318
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00003318 (812 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002533227.1| translation initiation factor if-3, putative... 231 1e-58 ref|XP_002276984.1| PREDICTED: translation initiation factor IF-... 230 2e-58 ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|2... 228 9e-58 ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation ... 228 1e-57 ref|XP_004144726.1| PREDICTED: translation initiation factor IF-... 228 1e-57 >ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis] gi|223526947|gb|EEF29148.1| translation initiation factor if-3, putative [Ricinus communis] Length = 274 Score = 231 bits (590), Expect = 1e-58 Identities = 116/167 (69%), Positives = 138/167 (82%) Frame = +1 Query: 1 LNISAIRSDTVRLIDDKQNMIGIMPKIEALQRAEDAELDLVILSPDADPPVVRLMDYNKF 180 L+IS IRS TVRLID++QNM+G++PK EA+Q AE+A LDLVILSPDADPPVVR+MDYNK+ Sbjct: 85 LDISTIRSATVRLIDEQQNMVGVVPKSEAIQMAENAALDLVILSPDADPPVVRIMDYNKY 144 Query: 181 XXXXXXXXXXXXXXSAAHRMDLKELKMGYNIDVHDYTVRLKAAHKFLKAGDKVKVIVNLK 360 SAA RMDLKELKMGYNID HDY VRL+AA KFLK GDKVKVIVNLK Sbjct: 145 RYELQKKKKGQQKKSAATRMDLKELKMGYNIDQHDYDVRLRAARKFLKDGDKVKVIVNLK 204 Query: 361 GRESDFRNKAIELIRRFQNDIGELAVEESKSFRERSMTLVMVPNKAV 501 GRE++FRN AIELIRRFQND+GELA EE+K+FR+R++ + + PNKA+ Sbjct: 205 GRENEFRNIAIELIRRFQNDVGELATEETKNFRDRNIFITLAPNKAI 251 >ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera] gi|297743667|emb|CBI36550.3| unnamed protein product [Vitis vinifera] Length = 272 Score = 230 bits (587), Expect = 2e-58 Identities = 114/167 (68%), Positives = 141/167 (84%) Frame = +1 Query: 1 LNISAIRSDTVRLIDDKQNMIGIMPKIEALQRAEDAELDLVILSPDADPPVVRLMDYNKF 180 L++S+IRS +VRLID++QNM+G++ K +A+Q AEDAELDLV+LSPDADPPVVR+MDYNK+ Sbjct: 83 LDVSSIRSASVRLIDEQQNMVGVVSKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKY 142 Query: 181 XXXXXXXXXXXXXXSAAHRMDLKELKMGYNIDVHDYTVRLKAAHKFLKAGDKVKVIVNLK 360 SAA+RMDLKELKMGYNID HDY+VRLKAA KFL+ GDKVK+IVNLK Sbjct: 143 RYELQKKKRGQQKKSAANRMDLKELKMGYNIDSHDYSVRLKAARKFLQDGDKVKIIVNLK 202 Query: 361 GRESDFRNKAIELIRRFQNDIGELAVEESKSFRERSMTLVMVPNKAV 501 GRE++FRN AIELIRRFQND+GELA EESK+F R++ +V+VPNKA+ Sbjct: 203 GRENEFRNIAIELIRRFQNDVGELATEESKNFSVRNIFIVLVPNKAL 249 >ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|222866557|gb|EEF03688.1| predicted protein [Populus trichocarpa] Length = 278 Score = 228 bits (582), Expect = 9e-58 Identities = 115/167 (68%), Positives = 136/167 (81%) Frame = +1 Query: 1 LNISAIRSDTVRLIDDKQNMIGIMPKIEALQRAEDAELDLVILSPDADPPVVRLMDYNKF 180 LNIS+IRS TVRLID +QNM+G++ +A+Q AED EL+LVI+SPDADPPVVR+MDYNKF Sbjct: 89 LNISSIRSATVRLIDQQQNMVGVVTVRDAIQMAEDTELNLVIVSPDADPPVVRIMDYNKF 148 Query: 181 XXXXXXXXXXXXXXSAAHRMDLKELKMGYNIDVHDYTVRLKAAHKFLKAGDKVKVIVNLK 360 SAA RMDLKELKMGYNID HDY VRL+AA KFLK GDKVKVIVNLK Sbjct: 149 RYEQQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYDVRLRAARKFLKDGDKVKVIVNLK 208 Query: 361 GRESDFRNKAIELIRRFQNDIGELAVEESKSFRERSMTLVMVPNKAV 501 GRE++FRN AIEL+RRFQND+GELA EESK+FR+R+ + +VPNKA+ Sbjct: 209 GRENEFRNNAIELLRRFQNDVGELATEESKNFRDRNAFITLVPNKAL 255 >ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor IF-3-like [Cucumis sativus] Length = 299 Score = 228 bits (581), Expect = 1e-57 Identities = 115/167 (68%), Positives = 139/167 (83%) Frame = +1 Query: 1 LNISAIRSDTVRLIDDKQNMIGIMPKIEALQRAEDAELDLVILSPDADPPVVRLMDYNKF 180 L+ISAI+S VRLID +QNM+G++ K +A+Q AEDAELDLV++SPDADPPVVR+MDYNK+ Sbjct: 110 LDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKY 169 Query: 181 XXXXXXXXXXXXXXSAAHRMDLKELKMGYNIDVHDYTVRLKAAHKFLKAGDKVKVIVNLK 360 SAA RMDLKELKMGYNID HDY+VRLKAA KFLK GDKVKVIVNLK Sbjct: 170 RYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLK 229 Query: 361 GRESDFRNKAIELIRRFQNDIGELAVEESKSFRERSMTLVMVPNKAV 501 GRE++FRN AIELIRRFQ ++GELA EE+K+FR+R++ +V+VPNKAV Sbjct: 230 GRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAV 276 >ref|XP_004144726.1| PREDICTED: translation initiation factor IF-3-like [Cucumis sativus] Length = 299 Score = 228 bits (581), Expect = 1e-57 Identities = 115/167 (68%), Positives = 139/167 (83%) Frame = +1 Query: 1 LNISAIRSDTVRLIDDKQNMIGIMPKIEALQRAEDAELDLVILSPDADPPVVRLMDYNKF 180 L+ISAI+S VRLID +QNM+G++ K +A+Q AEDAELDLV++SPDADPPVVR+MDYNK+ Sbjct: 110 LDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKY 169 Query: 181 XXXXXXXXXXXXXXSAAHRMDLKELKMGYNIDVHDYTVRLKAAHKFLKAGDKVKVIVNLK 360 SAA RMDLKELKMGYNID HDY+VRLKAA KFLK GDKVKVIVNLK Sbjct: 170 RYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLK 229 Query: 361 GRESDFRNKAIELIRRFQNDIGELAVEESKSFRERSMTLVMVPNKAV 501 GRE++FRN AIELIRRFQ ++GELA EE+K+FR+R++ +V+VPNKAV Sbjct: 230 GRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAV 276