BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003315
         (1794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-li...   485   e-134
gb|AFK41173.1| unknown [Lotus japonicus]                              484   e-134
ref|XP_002524917.1| exonuclease, putative [Ricinus communis] gi|...   465   e-128
ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-li...   461   e-127
ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-li...   456   e-126

>ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-like [Glycine max]
          Length = 509

 Score =  485 bits (1249), Expect = e-134
 Identities = 250/448 (55%), Positives = 330/448 (73%), Gaps = 3/448 (0%)
 Frame = -2

Query: 1733 MDGKLEAAGKDILVEIVKLAQKSQMQGSKGGWKEFLSSYDKKFGASLSDPSKRSPEDLLA 1554
            M+ K+E A K +LV+IVKLAQK  ++G+ GGWKEFL+S+DKKFGA LSDPSKRS E L A
Sbjct: 1    MEDKIETADKKVLVDIVKLAQKRGLKGNLGGWKEFLNSHDKKFGAGLSDPSKRSHEVLAA 60

Query: 1553 FLKTFSSE-DLKYFEKVMECHVNRENVEKFSKTSAGGESPEQMLVRLTLEHPLYPSSYSF 1377
            FLKTFS E DLK+F+ +M  H N+  +E+    S   +SPEQ LV+ TL+HPLYP  YSF
Sbjct: 61   FLKTFSKEEDLKFFDNIMRHHSNQYMLERLKDKSH--DSPEQRLVQATLQHPLYPLDYSF 118

Query: 1376 PSHEEGWEVTKRSKKSKALRSTDMISVDCEMVLCEDGTDALVRVCVVDRSLEVILDQLVK 1197
            PS +EGW V     K K ++ST+M++VDCEMVLCEDGT+A+V+VCVVD +LEV LD+LVK
Sbjct: 119  PSIDEGWIVVNFKNKPKVMKSTEMVAVDCEMVLCEDGTEAVVKVCVVDHNLEVKLDKLVK 178

Query: 1196 PDKTVVDYRTDITGIAAKDLEGETCSLLYVQKSLKNLLRNGRILIGHSLHNDLNALKLDH 1017
            PDK + DYRT+ITG++++DLE  TCSL  +QK +K LL +G IL+GHSLHNDL  LKLDH
Sbjct: 179  PDKEIADYRTEITGVSSQDLEAVTCSLADIQKYMKKLLSSGIILVGHSLHNDLRVLKLDH 238

Query: 1016 ARVIDTSLVFKYAYGSHYRRPSLVDLCKSVLGYELRKKGAPHNCLDDACAAMKLVLAKIE 837
             RVIDTS +F+   GS ++RPSL  LC++VL +E+R+KGAPHNCLDDA AAM LVLAKI+
Sbjct: 239  VRVIDTSYIFQSLDGSIHKRPSLNSLCQAVLHHEVREKGAPHNCLDDAKAAMDLVLAKIK 298

Query: 836  DGVDNFIP--LLEKDVPETDMMKLLVHRIPTSLPKEELHNIIPGDFTTEVKTNKNAGGGT 663
             GVD   P  L+++ VPE+++ KLL+H+IP ++  E LH I+PG+F  E+K ++   G  
Sbjct: 299  HGVDKEFPIALVQEHVPESELAKLLLHKIPNTVNIETLHKILPGNFKIELKPSRKGQGAN 358

Query: 662  YAAFIIFGDQQLADEAYKNLVGKQDHDSSGRPQKLVSYKLANGLTGSLCVCKMAPDNQSC 483
            Y+AF IF     AD AY+N+ G Q  D+ G PQKLV+++L+ GL+ +L V KM  +  + 
Sbjct: 359  YSAFAIFRSPPEADGAYENVQGSQLKDTYGHPQKLVTFRLSTGLSVNLFVRKMVTEEPND 418

Query: 482  QTVSKKRSIEGEAPVKSKKSKPDPIVQE 399
            QT SK+     EA   SKK+K DP ++E
Sbjct: 419  QTPSKRALQINEAVDVSKKAKMDPKIEE 446


>gb|AFK41173.1| unknown [Lotus japonicus]
          Length = 525

 Score =  484 bits (1245), Expect = e-134
 Identities = 262/511 (51%), Positives = 349/511 (68%), Gaps = 21/511 (4%)
 Frame = -2

Query: 1733 MDGKLEAAGKDILVEIVKLAQKSQMQGSKGGWKEFLSSYDKKFGASLSDPSKRSPEDLLA 1554
            MD K++AA K +LV+IVKL+QK  M+G+ G WKEFL+SYDKKFGAS+SDP+KR+ E L A
Sbjct: 4    MDDKIDAADKKVLVDIVKLSQKRGMKGNLGDWKEFLNSYDKKFGASMSDPAKRTHEVLAA 63

Query: 1553 FLKTFSSED-LKYFEKVMECHVNRENVEKFSKTSAGGESPEQMLVRLTLEHPLYPSSYSF 1377
            FLKTFS ED LK+F  +M  H N+ +VEK    S   +SPEQ LV++TL+HPLYP  YSF
Sbjct: 64   FLKTFSKEDDLKFFANIMRHHSNQYSVEKLKDKSH--DSPEQGLVQITLQHPLYPLDYSF 121

Query: 1376 PSHEEGWEVTKRSKKSKALRSTDMISVDCEMVLCEDGTDALVRVCVVDRSLEVILDQLVK 1197
             S +EGW +    K  KA+RST M++VDCEMVLCEDGT+ALV VCVVD +L+V L + VK
Sbjct: 122  QSIDEGWVIINLRKNKKAMRSTAMVAVDCEMVLCEDGTEALVEVCVVDHNLKVKLHKRVK 181

Query: 1196 PDKTVVDYRTDITGIAAKDLEGETCSLLYVQKSLKNLLRNGRILIGHSLHNDLNALKLDH 1017
            PDK +VDYRT++TG++++DLE  TC+L  +QK +K LL NG IL+GHSL NDL  LKLDH
Sbjct: 182  PDKAIVDYRTEVTGVSSRDLETVTCTLADIQKKMKRLLSNGTILVGHSLDNDLRVLKLDH 241

Query: 1016 ARVIDTSLVFKYAYGSHYRRPSLVDLCKSVLGYELRKKGAPHNCLDDACAAMKLVLAKIE 837
             RV+DT+ +F+   GS +R+PSL  LC++VLGYE+R+KGAPHNCLDDACAAMKLVLA+I+
Sbjct: 242  VRVVDTAYIFQSLGGSIHRKPSLNGLCQAVLGYEVREKGAPHNCLDDACAAMKLVLARIK 301

Query: 836  DGVDNFIP--LLEKDVPETDMMKLLVHRIPTSLPKEELHNIIPGDFTTEVKTNKNAGGGT 663
             GVD   P  L+++ V E+DM KL +H IPTS+  E LH I+PGDFTTEVK ++      
Sbjct: 302  HGVDKEFPFTLVQEHVSESDMTKLPLHGIPTSVNIETLHKIVPGDFTTEVKPSRKGQRAK 361

Query: 662  YAAFIIFGDQQLADEAYKNLVGKQDHDSSGRPQKLVSYKLANGLTGSLCVCKMAPDNQSC 483
            Y+A   F +QQ A EAY+N+ G Q  DS GRPQK V ++ + G+T SL V KM  D    
Sbjct: 362  YSALATFKNQQEAYEAYENVQGSQTKDSFGRPQKEVMFRPSTGMTVSLFVRKMTADEPD- 420

Query: 482  QTVSKKRSIE----GEAPVKSKKSKPDPIVQE--------------LEQNKSVSELCNDX 357
              +  KR+++     EA   SKK+K  P ++E              L++ ++++E     
Sbjct: 421  NLLQSKRALQVDEADEAVNASKKAKTVPQIEEDVLIGSTKGDTCTHLKEIEALNEQLKQK 480

Query: 356  XXXXXXXXXXXXLRDQEISNLNRIIVALTRK 264
                         RD E+S L+ +I +L ++
Sbjct: 481  DLEIESLREQLRKRDFEVSKLHIMISSLKKR 511


>ref|XP_002524917.1| exonuclease, putative [Ricinus communis] gi|223535752|gb|EEF37414.1|
            exonuclease, putative [Ricinus communis]
          Length = 504

 Score =  465 bits (1196), Expect = e-128
 Identities = 252/499 (50%), Positives = 336/499 (67%), Gaps = 9/499 (1%)
 Frame = -2

Query: 1733 MDGKLEAAGKDILVEIVKLAQKSQMQGSKGGWKEFLSSYDKKFGASLSDPSKRSPEDLLA 1554
            M+ KL    + ILVEIVKLAQK   +G++GGWKEFL+ YDKK G+SLSDP+KR+   L++
Sbjct: 1    MENKLATVPEKILVEIVKLAQKQGRKGTQGGWKEFLNVYDKKIGSSLSDPAKRTRPTLVS 60

Query: 1553 FLKTFSSE-DLKYFEKVMECHVNRENVEKFSKTSAGGESPEQMLVRLTLEHPLYPSSYSF 1377
            FL+TF+ + DLK+ + V+  H NRE +++  + S   ESPEQ LVRLT+EHP Y S Y+F
Sbjct: 61   FLQTFTHKSDLKFVDYVLRLHSNREVLDQIRQESPDNESPEQRLVRLTVEHPFYLSKYAF 120

Query: 1376 PSHEEGWEVTKRSKKSKALRSTDMISVDCEMVLCEDGTDALVRVCVVDRSLEVILDQLVK 1197
            PS+++GW VTK  KKSK + +  +I++DCEMVLCEDGT+ALVRVCVVDR+L+V LD+ V 
Sbjct: 121  PSYDQGWVVTKLPKKSKLMSTDSIIAIDCEMVLCEDGTEALVRVCVVDRNLQVKLDEKVN 180

Query: 1196 PDKTVVDYRTDITGIAAKDLEGETCSLLYVQKSLKNLLRNGRILIGHSLHNDLNALKLDH 1017
            P K V DYRT+ITG+ A+DL+G +CSL  +QK +K LL+ G IL+GH L+NDL ALKLDH
Sbjct: 181  PYKPVADYRTEITGVTARDLDGVSCSLADIQKFMKKLLQKGTILVGHGLYNDLQALKLDH 240

Query: 1016 ARVIDTSLVFKYAYGSHYRRPSLVDLCKSVLGYELRKKGAPHNCLDDACAAMKLVLAKIE 837
            ARV+DTS +F+   G   R PSL  LCKSVLG+ELRK GAPHNC+DDA AAMKL LAKIE
Sbjct: 241  ARVVDTSFIFRRLDG---RPPSLDTLCKSVLGFELRKGGAPHNCMDDASAAMKLFLAKIE 297

Query: 836  DGVDNFIPLLEKDVPETDMMKLLVHRIPTSLPKEELHNIIPGDFTTEVKTNKNAGGGTYA 657
             GVDN IP+  + V E ++ KLL+H IPT +  EELH + P  FT E+K  K  G   Y+
Sbjct: 298  RGVDNDIPVNHEHVLENELAKLLLHGIPTDVHSEELHRVFPEQFTIELKPPKK-GRVQYS 356

Query: 656  AFIIFGDQQLADEAYKNLVGKQDHDSSGRPQKLVSYKLANGLTGSLCVCKMAPDNQSCQT 477
            A  IF D Q A  A+ NL G+ + D +G  QK+++ KL  G T +L V KM  D+   Q 
Sbjct: 357  ALAIFKDPQEAHCAFDNLNGRLEKDKNGLLQKMITLKLKTGATANLYVRKMGHDHFIHQD 416

Query: 476  VSKKRSIEGEAPVKSKKSKPDPI------VQELEQNKSVSEL--CNDXXXXXXXXXXXXX 321
            + KKR+ +GE    +KK K D        ++ L+Q     +L  C+D             
Sbjct: 417  LQKKRAFQGEDIGNTKKLKRDDCDDHVKEIERLKQELKEKDLSKCDDHMKEIEKLKQNLS 476

Query: 320  LRDQEISNLNRIIVALTRK 264
             ++ +IS  ++II  L ++
Sbjct: 477  SKEFQISTQDKIITKLKKE 495


>ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-like [Cucumis sativus]
            gi|449517369|ref|XP_004165718.1| PREDICTED: small RNA
            degrading nuclease 3-like [Cucumis sativus]
          Length = 524

 Score =  461 bits (1187), Expect = e-127
 Identities = 247/460 (53%), Positives = 320/460 (69%), Gaps = 3/460 (0%)
 Frame = -2

Query: 1733 MDGKLEAAGKDILVEIVKLAQKSQMQGSKGGWKEFLSSYDKKFGASLSDPSKRSPEDLLA 1554
            M+ K+  A K +LVE+V+L QK  M GS+G WKEFL+S D KFGAS+SDPSKR  + L+A
Sbjct: 1    MEDKIATAEKKVLVEMVRLTQKRGMTGSEGDWKEFLNSRDPKFGASMSDPSKRPNDLLIA 60

Query: 1553 FLKTFSSE-DLKYFEKVMECHVNRENVEKFSKTSAGGESPEQMLVRLTLEHPLYPSSYSF 1377
            FLKTF  E DL + +KV +C+  R  V++ S+ +   ESPEQ LVRLTLEHP YP  YSF
Sbjct: 61   FLKTFDKEEDLMFLDKVFQCNEKRNFVKQVSQITPENESPEQKLVRLTLEHPQYPLEYSF 120

Query: 1376 PSHEEGWEVTKRSKKSKALRSTDMISVDCEMVLCEDGTDALVRVCVVDRSLEVILDQLVK 1197
            PS+++ W VTK S+KSK   S  + ++DCEMVLCEDGT+ LVRVC+VDR L+V +D+LVK
Sbjct: 121  PSYDKEWVVTKFSQKSKGPNSNLIYAIDCEMVLCEDGTENLVRVCMVDRDLQVKIDELVK 180

Query: 1196 PDKTVVDYRTDITGIAAKDLEGETCSLLYVQKSLKNLLRNGR-ILIGHSLHNDLNALKLD 1020
            P K + DYRTDITGI+  DL+G +CSL  VQKS+   L +GR IL+GHSL+NDL ALKLD
Sbjct: 181  PRKAIKDYRTDITGISPGDLDGVSCSLADVQKSITKFLSHGRTILVGHSLNNDLQALKLD 240

Query: 1019 HARVIDTSLVFKYAYGSHYRRPSLVDLCKSVLGYELRKKGAPHNCLDDACAAMKLVLAKI 840
            H+RVIDTS +FKY+ GS YRRPSL  LCKSVLGY+LRK+GAPHNCLDDA AAMKLVLAK+
Sbjct: 241  HSRVIDTSFIFKYSNGSIYRRPSLSKLCKSVLGYDLRKEGAPHNCLDDAQAAMKLVLAKL 300

Query: 839  EDGVDNFIPLLEKDVPETDMMKLLVHRIPTSLPKEELHNIIPGDFTTEVK-TNKNAGGGT 663
            E   D+ I ++++D P+  M KLL+HRIP ++P E L   I GDFT E+K   K  GG  
Sbjct: 301  ESKADDGIAIVDEDTPQVGMEKLLLHRIPINVPSEALAKAIHGDFTIELKPPKKGQGGDI 360

Query: 662  YAAFIIFGDQQLADEAYKNLVGKQDHDSSGRPQKLVSYKLANGLTGSLCVCKMAPDNQSC 483
            Y+A  IF + + A +A++ + G    DSSGRPQKL+ ++ +  +  S+ V KM   +   
Sbjct: 361  YSALAIFQNPKEALQAFEEVEGNAYEDSSGRPQKLIRFQHSGSIV-SIYVRKMGQKDFMD 419

Query: 482  QTVSKKRSIEGEAPVKSKKSKPDPIVQELEQNKSVSELCN 363
               SKKR +E    +   K +      E+E   + S  CN
Sbjct: 420  NFSSKKRDLEVIENIVMSKKQKTANKMEIETISNSSRCCN 459


>ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-like [Vitis vinifera]
          Length = 389

 Score =  456 bits (1174), Expect = e-126
 Identities = 223/347 (64%), Positives = 279/347 (80%), Gaps = 1/347 (0%)
 Frame = -2

Query: 1733 MDGKLEAAGKDILVEIVKLAQKSQMQGSKGGWKEFLSSYDKKFGASLSDPSKRSPEDLLA 1554
            MD  L  A K++LVE+VKLAQK  ++GSKG WK+FLS+YD+K G SLSDPS+R  + L++
Sbjct: 1    MDNTLVNAEKEVLVEMVKLAQKRGLEGSKGSWKDFLSTYDRKLGPSLSDPSRRPVDTLVS 60

Query: 1553 FLKTFSSE-DLKYFEKVMECHVNRENVEKFSKTSAGGESPEQMLVRLTLEHPLYPSSYSF 1377
            FLKTFS E DLK+F K+++C+ NR+ VE+F   S G ESPEQ L+RLTLEHP YP  YSF
Sbjct: 61   FLKTFSKEEDLKFFAKILQCYANRKVVEEFKTKSHGKESPEQRLIRLTLEHPQYPLDYSF 120

Query: 1376 PSHEEGWEVTKRSKKSKALRSTDMISVDCEMVLCEDGTDALVRVCVVDRSLEVILDQLVK 1197
            PSHEEGW VTK  +K K  RS  M++VDCEMVLCEDGT+ LVRVCVVDR+L+V L++LVK
Sbjct: 121  PSHEEGWMVTKIRQKFKFTRSNAMLAVDCEMVLCEDGTEGLVRVCVVDRNLQVKLNELVK 180

Query: 1196 PDKTVVDYRTDITGIAAKDLEGETCSLLYVQKSLKNLLRNGRILIGHSLHNDLNALKLDH 1017
            P K VVDYRT+ITG++AKD +  T SL+ +Q+S+K LL +G +L+GHSLHNDL ALKLDH
Sbjct: 181  PHKAVVDYRTEITGVSAKDFDETTSSLVDIQRSMKKLLSHGAVLVGHSLHNDLKALKLDH 240

Query: 1016 ARVIDTSLVFKYAYGSHYRRPSLVDLCKSVLGYELRKKGAPHNCLDDACAAMKLVLAKIE 837
            ARVIDT+ ++KY      RRPSL +LCKS+LGYE+R+K APHNCLDDA AAMKLVLAK+E
Sbjct: 241  ARVIDTAFIYKYENQPINRRPSLNNLCKSILGYEVRQKDAPHNCLDDASAAMKLVLAKLE 300

Query: 836  DGVDNFIPLLEKDVPETDMMKLLVHRIPTSLPKEELHNIIPGDFTTE 696
             G+D+ IP + +DVPE +M KLL+HRIPT +P EEL+ IIPG+FT E
Sbjct: 301  QGLDDAIPFVHEDVPENEMAKLLLHRIPTDVPIEELNRIIPGEFTME 347