BLASTX nr result

ID: Bupleurum21_contig00003314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003314
         (1719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266092.1| PREDICTED: sister chromatid cohesion protein...   514   e-143
ref|XP_002298532.1| predicted protein [Populus trichocarpa] gi|2...   488   e-135
ref|XP_002526513.1| protein binding protein, putative [Ricinus c...   464   e-128
ref|XP_003527519.1| PREDICTED: sister chromatid cohesion protein...   454   e-125
ref|XP_003522876.1| PREDICTED: sister chromatid cohesion protein...   454   e-125

>ref|XP_002266092.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Vitis
            vinifera]
          Length = 397

 Score =  514 bits (1324), Expect = e-143
 Identities = 253/398 (63%), Positives = 314/398 (78%), Gaps = 6/398 (1%)
 Frame = -1

Query: 1626 MEQSHPGCDGGAEAVINLQPSSNITIAYHPLFGPHDDMFLLELDEKLLPDVIDQRISLRG 1447
            MEQ   GC GGAEAV+NLQP+S+I+I YHP FGPHDD+ LLE+D+KLLPDV+ QR++LRG
Sbjct: 1    MEQKQSGCTGGAEAVLNLQPNSSISITYHPHFGPHDDLILLEIDDKLLPDVLHQRVTLRG 60

Query: 1446 QPDEDAVLCTQSKTYAVKFVGNSNSVLLIPPSDQF-LYERDA---TKCTEEEVVASIVKV 1279
            QP+EDAVLCTQSKTY++KFVGNSNSV LIPP DQ  L+E       K  ++ VVAS++KV
Sbjct: 61   QPNEDAVLCTQSKTYSIKFVGNSNSVFLIPPVDQSALHEHPQYSDEKDDDQRVVASVIKV 120

Query: 1278 ALGNMELVEIAPKVDXXXXXXXXXXXXLGEVTETDDVDEIIDNDERSLYRWDDLTDMIQA 1099
            A GNMELVE+AP++D              EV+E +++ E ++  + +L++W+DL D +QA
Sbjct: 121  APGNMELVEVAPRLDKLKLLLLENPFTSEEVSEKEEL-EGMEEQKTNLFKWNDLIDRVQA 179

Query: 1098 SDEELRIALNAFSAVEINGYWRIVDENYMDAILNILLQNSILYDWSLMALNEEEVVGVLE 919
            SD+ELR  L A SAVEI+GYWRIVDE YM  ILN+LL NS+L DWSL AL E+EVVGVLE
Sbjct: 180  SDDELRSGLRALSAVEIDGYWRIVDEKYMGTILNMLLHNSVLNDWSLDALGEDEVVGVLE 239

Query: 918  TDGLSRKLACHCLQVFGCRVDGD--SCLWRLDERKVCVHFARIILSRGKMKMESFMEEWE 745
            +DG  R L  HCLQV+G +VD    SC+W+LDER++C+HFAR IL  GK KMESFMEEW 
Sbjct: 240  SDGFPRTLGLHCLQVYGSKVDEGVGSCVWKLDERRLCIHFAREILKDGKRKMESFMEEWI 299

Query: 744  RKVPEQMRVSFDMLEGEVLTEKLGIQAWVYAFSISSLPCDPAARFSALFHERKKWEWRDL 565
            +K+P+ M+ SFDMLEGEVLTEK G++ WV AFS+SSLP +PAARFS LF ER KWEW+DL
Sbjct: 300  QKIPDGMQASFDMLEGEVLTEKFGVETWVRAFSVSSLPSNPAARFSMLFQERPKWEWKDL 359

Query: 564  NPFIRDLSVPGLSAEGLLLKYTRRTQPTPDSEPVFTMR 451
             P+IRDL+VPGLS+EGLLLKYTR+TQP  D+EPVF+ R
Sbjct: 360  QPYIRDLTVPGLSSEGLLLKYTRKTQPNSDAEPVFSAR 397


>ref|XP_002298532.1| predicted protein [Populus trichocarpa] gi|222845790|gb|EEE83337.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  488 bits (1255), Expect = e-135
 Identities = 243/386 (62%), Positives = 296/386 (76%), Gaps = 4/386 (1%)
 Frame = -1

Query: 1596 GAEAVINLQPSSNITIAYHPLFGPHDDMFLLELDEKLLPDVIDQRISLRGQPDEDAVLCT 1417
            GAE+V+NL+P+S+I I YH LFG HDD+ LLE+DEKL PD++ +R++LRGQ DED+VLCT
Sbjct: 9    GAESVLNLEPNSSIAIGYHALFGSHDDLMLLEIDEKLFPDILHERVALRGQLDEDSVLCT 68

Query: 1416 QSKTYAVKFVGNSNSVLLIPPSDQF-LYERDATKCTEEEVVASIVKVALGNMELVEIAPK 1240
            QSKTYA+KFVGNSNS  LIPPS QF L E       E    A ++KVA GNMELVE+APK
Sbjct: 69   QSKTYAIKFVGNSNSPFLIPPSGQFALCENSQDFDGEINDFAPVIKVAPGNMELVEVAPK 128

Query: 1239 VDXXXXXXXXXXXXLGEVTETDDVDEIIDNDERSLYRWDDLTDMIQASDEELRIALNAFS 1060
            +D              +V E D ++++  N  R LY WDDL + +QASDEELR  L A S
Sbjct: 129  LDRLKLLLSENPYSYEDVLEMDFMEDVEKNKAR-LYNWDDLVERVQASDEELRNGLCALS 187

Query: 1059 AVEINGYWRIVDENYMDAILNILLQNSILYDWSLMALNEEEVVGVLETDGLSRKLACHCL 880
            AVEI+G+WRIVDE YMD IL +LL NSIL DWSL ALNE++VV VL +DG   KLACHCL
Sbjct: 188  AVEIDGFWRIVDEKYMDMILRMLLHNSILNDWSLDALNEDDVVSVLVSDGFPDKLACHCL 247

Query: 879  QVFGCRVDGD---SCLWRLDERKVCVHFARIILSRGKMKMESFMEEWERKVPEQMRVSFD 709
             V+G +VDGD   SC+WRLDE +VCVHFAR ILS GK KME+FM EW +++P +M+ SF+
Sbjct: 248  HVYGSKVDGDVGRSCVWRLDESRVCVHFARQILSTGKKKMETFMAEWLQRIPGRMQASFN 307

Query: 708  MLEGEVLTEKLGIQAWVYAFSISSLPCDPAARFSALFHERKKWEWRDLNPFIRDLSVPGL 529
            MLEGEVLTEKLG++ WVY+FS+SSLP  PA RF+ LF ER KWEW+DL P+IRDL VPGL
Sbjct: 308  MLEGEVLTEKLGVETWVYSFSVSSLPLTPAERFNMLFRERSKWEWKDLQPYIRDLKVPGL 367

Query: 528  SAEGLLLKYTRRTQPTPDSEPVFTMR 451
            S+EGLLLKYTRRTQPT D++PVF+ R
Sbjct: 368  SSEGLLLKYTRRTQPTLDADPVFSSR 393


>ref|XP_002526513.1| protein binding protein, putative [Ricinus communis]
            gi|223534188|gb|EEF35904.1| protein binding protein,
            putative [Ricinus communis]
          Length = 396

 Score =  464 bits (1195), Expect = e-128
 Identities = 235/399 (58%), Positives = 286/399 (71%), Gaps = 7/399 (1%)
 Frame = -1

Query: 1626 MEQSHPGCDGGAEAVINLQPSSNITIAYHPLFGPHDDMFLLELDEKLLPDVIDQRISLRG 1447
            M Q+  GC G AEAV+NLQP+S++ + YHPLFG HDD+ LLELD  LLPDV+ QR++LRG
Sbjct: 1    MGQAEVGCSG-AEAVLNLQPNSSVAVGYHPLFGSHDDLILLELDHNLLPDVLHQRVTLRG 59

Query: 1446 QPDEDAVLCTQSKTYAVKFVGNSNSVLLIPPSDQFL---YERDA-TKCTEEEVVASIVKV 1279
            QPDEDAVLCTQSKTY++KFVG SNS  LIP S QF    Y  D   +    ++ A I+K+
Sbjct: 60   QPDEDAVLCTQSKTYSIKFVGTSNSSFLIPQSGQFSMYDYPEDCDARVHARQLFAPIIKL 119

Query: 1278 ALGNMELVEIAPKVDXXXXXXXXXXXXLGEVTETDDVDEIIDNDERSLYRWDDLTDMIQA 1099
            A GNMEL E++P++D               V + +D+D     D+  LY WDDL  M+QA
Sbjct: 120  APGNMELTEVSPRLDKLRLLLSENPYKSDGVLDMEDLDT--GKDKTGLYTWDDLVGMVQA 177

Query: 1098 SDEELRIALNAFSAVEINGYWRIVDENYMDAILNILLQNSILYDWSLMALNEEEVVGVLE 919
            S+ ELR  L A SAVEI+GYWRIVDE YMD IL +LL NSIL DWSL  LNE+EV  +L 
Sbjct: 178  SNNELRSGLQALSAVEIDGYWRIVDEKYMDTILRMLLHNSILNDWSLDFLNEDEVTNLLA 237

Query: 918  TDGLSRKLACHCLQVFGCRVDGD---SCLWRLDERKVCVHFARIILSRGKMKMESFMEEW 748
            +DG   KLA HCL V+G +V+G      +W+LDER+VCVHFAR  L  GK KME FM EW
Sbjct: 238  SDGFPHKLAHHCLNVYGTKVNGGVGTGYVWKLDERRVCVHFARETLRAGKKKMEDFMGEW 297

Query: 747  ERKVPEQMRVSFDMLEGEVLTEKLGIQAWVYAFSISSLPCDPAARFSALFHERKKWEWRD 568
             +K+P+ M   FDMLEGEVLTEKLG++ WV  FSISSLP  PA RFS LF ER KWEW+D
Sbjct: 298  LKKIPDGMEAKFDMLEGEVLTEKLGVETWVRPFSISSLPSTPAERFSMLFRERSKWEWKD 357

Query: 567  LNPFIRDLSVPGLSAEGLLLKYTRRTQPTPDSEPVFTMR 451
            L+P+IRDL VPGLS+E LLLKYTRRTQP+ D+EP+F+ R
Sbjct: 358  LHPYIRDLKVPGLSSEALLLKYTRRTQPSLDAEPIFSAR 396


>ref|XP_003527519.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Glycine max]
          Length = 396

 Score =  454 bits (1168), Expect = e-125
 Identities = 226/390 (57%), Positives = 293/390 (75%), Gaps = 8/390 (2%)
 Frame = -1

Query: 1596 GAEAVINLQPSSNITIAYHPLFGPHDDMFLLELDEKLLPDVIDQRISLRGQPDEDAVLCT 1417
            GAEA+ ++ P S+I++AYH  FGP++D+  LELDEKLLPDV+++R+ LRGQPDEDAVLCT
Sbjct: 11   GAEALKHIAPGSSISVAYHSSFGPYEDLLFLELDEKLLPDVLNERVVLRGQPDEDAVLCT 70

Query: 1416 QSKTYAVKFVGNSNSVLLIPPSDQFLYERDATK----CTEEEVVASIVKVALGNMELVEI 1249
            QSKTYA+KFVG SNSVLL+PP++   Y  +  K      EE+VVA ++KV  GNMEL+E 
Sbjct: 71   QSKTYAMKFVGTSNSVLLVPPANHSEYYENQLKNDSNSDEEKVVAPVLKVVSGNMELIET 130

Query: 1248 APKVDXXXXXXXXXXXXLGEVTETDDVDEIIDNDER--SLYRWDDLTDMIQASDEELRIA 1075
            AP++D            L    E DD+  + +N E    LY W+DL D IQASDEEL   
Sbjct: 131  APRLDKLKSLLSEKPYKL----EEDDMGNLEENQESRIGLYNWNDLVDNIQASDEELLSG 186

Query: 1074 LNAFSAVEINGYWRIVDENYMDAILNILLQNSILYDWSLMALNEEEVVGVLETDGLSRKL 895
            L A SA+EI GYWR+VD +YMD IL ++L+N++L DWSL ALNE+EVV  LE+DG    L
Sbjct: 187  LQALSALEIYGYWRLVDGSYMDMILGMILKNAVLNDWSLNALNEDEVVSTLESDGFPGVL 246

Query: 894  ACHCLQVFGCRVDG--DSCLWRLDERKVCVHFARIILSRGKMKMESFMEEWERKVPEQMR 721
            A HCL V+G RV+    S +W+LDE++VC+HFAR IL  GK K+ESFM+EW +K+P+ M+
Sbjct: 247  ARHCLNVYGNRVNECMPSFVWKLDEKRVCIHFARDILKGGKRKLESFMDEWRQKIPDGMQ 306

Query: 720  VSFDMLEGEVLTEKLGIQAWVYAFSISSLPCDPAARFSALFHERKKWEWRDLNPFIRDLS 541
             +FD++EGEVLTEK+G++ WV+AFS++SLP  PA RFS LF ER KWEW+DL P+IRDL 
Sbjct: 307  PTFDLVEGEVLTEKIGVETWVHAFSVASLPSTPAERFSILFRERPKWEWKDLQPYIRDLK 366

Query: 540  VPGLSAEGLLLKYTRRTQPTPDSEPVFTMR 451
            +PGLS+EGLLLKYTRRTQP+ D+EPVF+ R
Sbjct: 367  LPGLSSEGLLLKYTRRTQPSADAEPVFSAR 396


>ref|XP_003522876.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Glycine max]
          Length = 396

 Score =  454 bits (1168), Expect = e-125
 Identities = 225/390 (57%), Positives = 293/390 (75%), Gaps = 8/390 (2%)
 Frame = -1

Query: 1596 GAEAVINLQPSSNITIAYHPLFGPHDDMFLLELDEKLLPDVIDQRISLRGQPDEDAVLCT 1417
            GAE + ++ P S+I++AYHP FGP+DD+  LELDEKLLPDV+++R+ LRGQPDEDAVLCT
Sbjct: 11   GAETLKHIAPGSSISVAYHPSFGPYDDLLFLELDEKLLPDVLNERVVLRGQPDEDAVLCT 70

Query: 1416 QSKTYAVKFVGNSNSVLLIPPSDQFLYERDATKCT----EEEVVASIVKVALGNMELVEI 1249
             SKTYA+KFVG SNSVLL+PP++   +  +  K      E++VV  ++KV  GNMEL+E 
Sbjct: 71   LSKTYAMKFVGTSNSVLLVPPANHSEFSENPQKNDSTNDEDKVVVPVLKVVSGNMELIET 130

Query: 1248 APKVDXXXXXXXXXXXXLGEVTETDDVDEIIDNDER--SLYRWDDLTDMIQASDEELRIA 1075
            AP++D            L    E DD+  + +N E    LY W+ L D IQASD+EL   
Sbjct: 131  APRLDKLKLLLSEKPYKL----EEDDMGNLEENQESRIGLYNWNYLVDNIQASDKELLSG 186

Query: 1074 LNAFSAVEINGYWRIVDENYMDAILNILLQNSILYDWSLMALNEEEVVGVLETDGLSRKL 895
            L A SA+EINGYWR+VD +YMD IL +LL+N++L DWSL ALNE+EVV +LE+DG  R L
Sbjct: 187  LQALSALEINGYWRLVDGSYMDMILGMLLKNAVLNDWSLNALNEDEVVSILESDGFPRVL 246

Query: 894  ACHCLQVFGCRVDG--DSCLWRLDERKVCVHFARIILSRGKMKMESFMEEWERKVPEQMR 721
            A HCL V+G +V+    S +W+LDE++VC+HFAR IL  GK K+ESFM+EW++K+P+ M 
Sbjct: 247  ARHCLHVYGNKVNECMPSFVWKLDEKRVCIHFAREILKGGKRKLESFMDEWKQKIPDGMH 306

Query: 720  VSFDMLEGEVLTEKLGIQAWVYAFSISSLPCDPAARFSALFHERKKWEWRDLNPFIRDLS 541
             +FD++EGEVLTE+LG++ WV AFS++SLP  PA RFS LF ER KWEW+DL P+IRDL 
Sbjct: 307  PTFDLVEGEVLTERLGVETWVRAFSVASLPSTPAERFSILFRERPKWEWKDLQPYIRDLK 366

Query: 540  VPGLSAEGLLLKYTRRTQPTPDSEPVFTMR 451
            VPGLS+EGLLLKYTRRTQP+PD+EPVF+ R
Sbjct: 367  VPGLSSEGLLLKYTRRTQPSPDTEPVFSAR 396


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