BLASTX nr result

ID: Bupleurum21_contig00003308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003308
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40788.3| unnamed protein product [Vitis vinifera]              187   1e-45
ref|XP_002273784.1| PREDICTED: squamosa promoter-binding-like pr...   187   1e-45
ref|XP_002301891.1| predicted protein [Populus trichocarpa] gi|2...   175   4e-42
ref|XP_002307006.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42
ref|XP_002510746.1| Squamosa promoter-binding protein, putative ...   172   3e-41

>emb|CBI40788.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  187 bits (474), Expect = 1e-45
 Identities = 95/137 (69%), Positives = 110/137 (80%)
 Frame = +1

Query: 1    RFKFLFIFSVENDFCFLVKTLLDFLLEICLGSDELSRKSLEMLLEINLLIKAVKRRSRKM 180
            RFKFLF FSVE D C LVKTLLD L+E  LGSD LS KSLE L E+ LL +AVKRR RKM
Sbjct: 670  RFKFLFTFSVERDCCALVKTLLDILVERNLGSDGLSSKSLETLSEVQLLSRAVKRRYRKM 729

Query: 181  VDLLINYFVPTVTNKTYIFPPNLVGPGGITPLHLAACMSDSEVMVDTLTNDPQEIGLHGW 360
            VDLLI+Y V + ++K YIFPPNLVG GGITPLHLAAC + S+ ++D LT+DPQEIGLH W
Sbjct: 730  VDLLIHYSVASSSSKKYIFPPNLVGAGGITPLHLAACTAGSDDIIDALTSDPQEIGLHSW 789

Query: 361  DSLLDENGLSPHAYAQM 411
            +SLLD +G SP+AYA M
Sbjct: 790  NSLLDASGQSPYAYAMM 806


>ref|XP_002273784.1| PREDICTED: squamosa promoter-binding-like protein 14-like [Vitis
            vinifera]
          Length = 1070

 Score =  187 bits (474), Expect = 1e-45
 Identities = 95/137 (69%), Positives = 110/137 (80%)
 Frame = +1

Query: 1    RFKFLFIFSVENDFCFLVKTLLDFLLEICLGSDELSRKSLEMLLEINLLIKAVKRRSRKM 180
            RFKFLF FSVE D C LVKTLLD L+E  LGSD LS KSLE L E+ LL +AVKRR RKM
Sbjct: 819  RFKFLFTFSVERDCCALVKTLLDILVERNLGSDGLSSKSLETLSEVQLLSRAVKRRYRKM 878

Query: 181  VDLLINYFVPTVTNKTYIFPPNLVGPGGITPLHLAACMSDSEVMVDTLTNDPQEIGLHGW 360
            VDLLI+Y V + ++K YIFPPNLVG GGITPLHLAAC + S+ ++D LT+DPQEIGLH W
Sbjct: 879  VDLLIHYSVASSSSKKYIFPPNLVGAGGITPLHLAACTAGSDDIIDALTSDPQEIGLHSW 938

Query: 361  DSLLDENGLSPHAYAQM 411
            +SLLD +G SP+AYA M
Sbjct: 939  NSLLDASGQSPYAYAMM 955


>ref|XP_002301891.1| predicted protein [Populus trichocarpa] gi|222843617|gb|EEE81164.1|
            predicted protein [Populus trichocarpa]
          Length = 1044

 Score =  175 bits (443), Expect = 4e-42
 Identities = 91/139 (65%), Positives = 107/139 (76%), Gaps = 2/139 (1%)
 Frame = +1

Query: 1    RFKFLFIFSVENDFCFLVKTLLDFLLEICLGSDELSRKSLEMLLEINLLIKAVKRRSRKM 180
            RFKFL IFSVE D+C LVKT+LD L+E     DELS++ LEML EI LL ++VKRR RKM
Sbjct: 789  RFKFLLIFSVERDYCVLVKTILDMLVERNTCRDELSKEHLEMLYEIQLLNRSVKRRCRKM 848

Query: 181  VDLLINYFVPTVTN--KTYIFPPNLVGPGGITPLHLAACMSDSEVMVDTLTNDPQEIGLH 354
             DLLI+Y +    N  +TYIFPPN+ GPGGITPLHLAAC S S+ +VD LTNDP EIGL 
Sbjct: 849  ADLLIHYSIIGGDNSSRTYIFPPNVGGPGGITPLHLAACASGSDGLVDALTNDPHEIGLS 908

Query: 355  GWDSLLDENGLSPHAYAQM 411
             W+S+LD NGLSP+AYA M
Sbjct: 909  CWNSVLDANGLSPYAYAVM 927


>ref|XP_002307006.1| predicted protein [Populus trichocarpa] gi|222856455|gb|EEE94002.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  174 bits (441), Expect = 7e-42
 Identities = 89/139 (64%), Positives = 108/139 (77%), Gaps = 2/139 (1%)
 Frame = +1

Query: 1   RFKFLFIFSVENDFCFLVKTLLDFLLEICLGSDELSRKSLEMLLEINLLIKAVKRRSRKM 180
           RF+FL IFSVE D+C LVKT+LD L+E  +  DELS++SLEML E+ LL ++VKR  RKM
Sbjct: 96  RFRFLLIFSVERDYCVLVKTILDMLVERNMCRDELSKESLEMLSEVQLLNRSVKRSCRKM 155

Query: 181 VDLLINYFVPTVTN--KTYIFPPNLVGPGGITPLHLAACMSDSEVMVDTLTNDPQEIGLH 354
           VDLLI+Y + +  N  +TYIFPPN+ GPGGITPLHL AC S S+ +VD LTNDP EIGL 
Sbjct: 156 VDLLIHYSIVSHDNSSRTYIFPPNVRGPGGITPLHLVACASGSDGLVDALTNDPHEIGLS 215

Query: 355 GWDSLLDENGLSPHAYAQM 411
            W+SLLD NG SP+AYA M
Sbjct: 216 CWNSLLDANGQSPYAYALM 234


>ref|XP_002510746.1| Squamosa promoter-binding protein, putative [Ricinus communis]
            gi|223551447|gb|EEF52933.1| Squamosa promoter-binding
            protein, putative [Ricinus communis]
          Length = 1073

 Score =  172 bits (436), Expect = 3e-41
 Identities = 87/139 (62%), Positives = 110/139 (79%), Gaps = 2/139 (1%)
 Frame = +1

Query: 1    RFKFLFIFSVENDFCFLVKTLLDFLLEICLGSDELSRKSLEMLLEINLLIKAVKRRSRKM 180
            RFKFL IFSVE D+C LVKT+LD L+E  +G   LS++ LEML EI+L+ +AVKR+ RKM
Sbjct: 821  RFKFLLIFSVERDYCALVKTILDMLVERNMGMSGLSKECLEMLSEIHLVNRAVKRQCRKM 880

Query: 181  VDLLINYFV--PTVTNKTYIFPPNLVGPGGITPLHLAACMSDSEVMVDTLTNDPQEIGLH 354
            VDLLI+Y++    +++K+YIFPP+L GPGGITPLHLAAC S S+ +VD LTNDPQEIGL 
Sbjct: 881  VDLLIHYYINCSELSSKSYIFPPSLAGPGGITPLHLAACTSGSDDLVDALTNDPQEIGLS 940

Query: 355  GWDSLLDENGLSPHAYAQM 411
             W+SL+D N  SP+ YA M
Sbjct: 941  CWNSLVDANHQSPYDYATM 959


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