BLASTX nr result

ID: Bupleurum21_contig00003285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003285
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFG28405.1| glyceraldehyde-3-phosphate dehydrogenase B [Pyrus...   256   2e-66
ref|NP_001237135.1| glyceraldehyde-3-phosphate dehydrogenase B s...   250   9e-65
ref|NP_001240080.1| uncharacterized protein LOC100806482 [Glycin...   248   6e-64
gb|ACU20783.1| unknown [Glycine max]                                  246   1e-63
emb|CAN69459.1| hypothetical protein VITISV_021576 [Vitis vinifera]   246   1e-63

>gb|AFG28405.1| glyceraldehyde-3-phosphate dehydrogenase B [Pyrus x bretschneideri]
          Length = 452

 Score =  256 bits (653), Expect = 2e-66
 Identities = 122/147 (82%), Positives = 136/147 (92%)
 Frame = -1

Query: 443 RIPSTTRLPSKSSHSYPTQCFSKRLDVAEYSGLRSRASLTYSKDAREGSFFDVVAAQLSP 264
           R+P+ TRLPSK SHS+PTQCFSKRL+V E+SGLRS + +TY+ + RE SFFD VAAQL+P
Sbjct: 11  RVPANTRLPSKPSHSFPTQCFSKRLEVGEFSGLRSSSCVTYASNGREQSFFDTVAAQLTP 70

Query: 263 KTTGTSPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLL 84
           KT G +PV+GETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLL
Sbjct: 71  KTAGPTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLL 130

Query: 83  KYDSMLGTFKADVKVVDSETISVDGKP 3
           KYDSMLGTFKADVK+VD+ETISVDGKP
Sbjct: 131 KYDSMLGTFKADVKIVDNETISVDGKP 157


>ref|NP_001237135.1| glyceraldehyde-3-phosphate dehydrogenase B subunit [Glycine max]
           gi|77540212|gb|ABA86964.1| glyceraldehyde-3-phosphate
           dehydrogenase B subunit [Glycine max]
          Length = 451

 Score =  250 bits (639), Expect = 9e-65
 Identities = 118/147 (80%), Positives = 136/147 (92%)
 Frame = -1

Query: 443 RIPSTTRLPSKSSHSYPTQCFSKRLDVAEYSGLRSRASLTYSKDAREGSFFDVVAAQLSP 264
           RIPS TR PSK+SHS+PTQC  KRL+V E+SGLRS + +TY+  ARE SFFD+VA+QL+P
Sbjct: 11  RIPSNTRFPSKASHSFPTQCALKRLEVTEFSGLRSTSCVTYANSARESSFFDLVASQLTP 70

Query: 263 KTTGTSPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLL 84
           KT G++PV+GETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEV+VVNDSGGVKNASHLL
Sbjct: 71  KTNGSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVNDSGGVKNASHLL 130

Query: 83  KYDSMLGTFKADVKVVDSETISVDGKP 3
           KYDSMLGTFKADVK++D+ETI+VDGKP
Sbjct: 131 KYDSMLGTFKADVKILDNETITVDGKP 157


>ref|NP_001240080.1| uncharacterized protein LOC100806482 [Glycine max]
           gi|255636463|gb|ACU18570.1| unknown [Glycine max]
          Length = 451

 Score =  248 bits (632), Expect = 6e-64
 Identities = 117/146 (80%), Positives = 135/146 (92%)
 Frame = -1

Query: 443 RIPSTTRLPSKSSHSYPTQCFSKRLDVAEYSGLRSRASLTYSKDAREGSFFDVVAAQLSP 264
           RIPS TR PSK+SHS+PTQC  KRL+V E+SGLRS + +TY+  ARE SFFD+VA+QL+P
Sbjct: 11  RIPSNTRFPSKASHSFPTQCALKRLEVTEFSGLRSTSCVTYANSARESSFFDLVASQLTP 70

Query: 263 KTTGTSPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLL 84
           KT G++PV+GETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEV+VVNDSGGVKNASHLL
Sbjct: 71  KTNGSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVNDSGGVKNASHLL 130

Query: 83  KYDSMLGTFKADVKVVDSETISVDGK 6
           KYDSMLGTFKADVK++D+ETI+VDGK
Sbjct: 131 KYDSMLGTFKADVKILDNETITVDGK 156


>gb|ACU20783.1| unknown [Glycine max]
          Length = 452

 Score =  246 bits (629), Expect = 1e-63
 Identities = 118/148 (79%), Positives = 137/148 (92%), Gaps = 1/148 (0%)
 Frame = -1

Query: 443 RIPSTTRLPSKSSHSYPTQCFSKRLDVAEYSGLRSRASLTYSKDAREGSFFDVVAAQLSP 264
           RIP+ T+ PSK+SHS+PTQC SKRL+V E+SGLRS + +TY+ DARE SFFD+VA+QL+P
Sbjct: 11  RIPTNTKFPSKASHSFPTQCASKRLEVTEFSGLRSTSCVTYANDARESSFFDLVASQLTP 70

Query: 263 KTTGTS-PVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHL 87
           KT G+S PV+GETVAKLKVAINGFGRIG NFLRCWHGRKDSPLEV+VVNDSGGVKNASHL
Sbjct: 71  KTNGSSTPVRGETVAKLKVAINGFGRIGGNFLRCWHGRKDSPLEVVVVNDSGGVKNASHL 130

Query: 86  LKYDSMLGTFKADVKVVDSETISVDGKP 3
           LKYDSMLGTFKADVK++D+ETI+VDGKP
Sbjct: 131 LKYDSMLGTFKADVKILDNETITVDGKP 158


>emb|CAN69459.1| hypothetical protein VITISV_021576 [Vitis vinifera]
          Length = 453

 Score =  246 bits (629), Expect = 1e-63
 Identities = 121/148 (81%), Positives = 139/148 (93%), Gaps = 1/148 (0%)
 Frame = -1

Query: 443 RIPST-TRLPSKSSHSYPTQCFSKRLDVAEYSGLRSRASLTYSKDAREGSFFDVVAAQLS 267
           RIP+T TRLPSK+SHS+PTQ F+KRL+VAE+SGLRS   +T++K+ARE SFFDVVA+QL+
Sbjct: 11  RIPTTNTRLPSKASHSFPTQFFAKRLEVAEFSGLRSGGCVTFAKNAREPSFFDVVASQLT 70

Query: 266 PKTTGTSPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHL 87
           PK  G +PV+GETVAKLKVAINGFGRIGRNFLRCWHGRKDSPL+VIVVNDSGGVKNASHL
Sbjct: 71  PKAGGPAPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIVVNDSGGVKNASHL 130

Query: 86  LKYDSMLGTFKADVKVVDSETISVDGKP 3
           LKYDSMLGTFKA+VK+VD+ETISVDGKP
Sbjct: 131 LKYDSMLGTFKAEVKIVDNETISVDGKP 158


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