BLASTX nr result

ID: Bupleurum21_contig00003284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003284
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFG28405.1| glyceraldehyde-3-phosphate dehydrogenase B [Pyrus...   475   e-132
gb|AEO45784.1| glyceraldehyde-3-phosphate dehydrogenase B [Scopa...   468   e-129
ref|NP_001237135.1| glyceraldehyde-3-phosphate dehydrogenase B s...   465   e-128
ref|XP_004145550.1| PREDICTED: glyceraldehyde-3-phosphate dehydr...   464   e-128
emb|CAN69459.1| hypothetical protein VITISV_021576 [Vitis vinifera]   462   e-128

>gb|AFG28405.1| glyceraldehyde-3-phosphate dehydrogenase B [Pyrus x bretschneideri]
          Length = 452

 Score =  475 bits (1222), Expect = e-132
 Identities = 246/319 (77%), Positives = 262/319 (82%), Gaps = 22/319 (6%)
 Frame = -1

Query: 892 MASNAALASSRIPTTTRLPSKSSHSYPTQCFSKRLNVAEFSGLRSSVSLTYSRSAGEGSF 713
           MAS+AALASSR+P  TRLPSK SHS+PTQCFSKRL V EFSGLRSS  +TY+ +  E SF
Sbjct: 1   MASHAALASSRVPANTRLPSKPSHSFPTQCFSKRLEVGEFSGLRSSSCVTYASNGREQSF 60

Query: 712 FDVVAAQLTPKTAGTLPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVNDS 533
           FD VAAQLTPKTAG  PV+GETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEV+VVNDS
Sbjct: 61  FDTVAAQLTPKTAGPTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDS 120

Query: 532 GGVKNASHLLKYDSMLGTFKADVQVVDNETISVDGKPIKVVSNRDPLQLPWAELGIDIVI 353
           GGVKNASHLLKYDSMLGTFKADV++VDNETISVDGKP+KVVS+RDPL+LPWAE+GIDIVI
Sbjct: 121 GGVKNASHLLKYDSMLGTFKADVKIVDNETISVDGKPVKVVSSRDPLKLPWAEMGIDIVI 180

Query: 352 EGTGVFVDGPGAGKHIQAGAKKV----------------------XXXXVANIVSNASCT 239
           EGTGVFVDGPGAGKHIQAGAKKV                          VANIVSNASCT
Sbjct: 181 EGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTHVVGVNEKDYGHDVANIVSNASCT 240

Query: 238 TNCLAPFVKVIDEEFGIVKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTGAA 59
           TNCLAPFVK++DEEFGIVKGTMTTTHSYTGDQ                 LNIVPTSTGAA
Sbjct: 241 TNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAA 300

Query: 58  KAVSLVLPQLKGKLNGIAL 2
           KAVSLVLPQLKGKLNGIAL
Sbjct: 301 KAVSLVLPQLKGKLNGIAL 319


>gb|AEO45784.1| glyceraldehyde-3-phosphate dehydrogenase B [Scoparia dulcis]
          Length = 452

 Score =  468 bits (1203), Expect = e-129
 Identities = 248/320 (77%), Positives = 265/320 (82%), Gaps = 23/320 (7%)
 Frame = -1

Query: 892 MASNAALASSRIPTTTRLPSKSSHSYPT-QCFSKRLNVAEFSGLRSSVSLTYSRSAGEGS 716
           MASNAALASSRIPT+TRLPSK+SHS+P  QCFSK+L VAEFSGLRSS  +T++++  E S
Sbjct: 1   MASNAALASSRIPTSTRLPSKTSHSFPAAQCFSKKLEVAEFSGLRSSGCVTFAKNK-EAS 59

Query: 715 FFDVVAAQLTPKTAGTLPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVND 536
           FFD VAAQLT KTAG+  VKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEV+VVND
Sbjct: 60  FFDAVAAQLTLKTAGSTTVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVND 119

Query: 535 SGGVKNASHLLKYDSMLGTFKADVQVVDNETISVDGKPIKVVSNRDPLQLPWAELGIDIV 356
           SGGVKNASHLLKYDSMLGTFKADV++VDNETISVDGKPIKVVSNRDPL+LPWAELGIDIV
Sbjct: 120 SGGVKNASHLLKYDSMLGTFKADVKIVDNETISVDGKPIKVVSNRDPLKLPWAELGIDIV 179

Query: 355 IEGTGVFVDGPGAGKHIQAGAKKV----------------------XXXXVANIVSNASC 242
           IEGTGVFVDGPGAGKHIQAGAKKV                          VANI+SNASC
Sbjct: 180 IEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGSDIPTYVVGVNEQDYEHDVANIISNASC 239

Query: 241 TTNCLAPFVKVIDEEFGIVKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTGA 62
           TTNCLAPFVK++DEEFGIVKGTMTTTHSYTGDQ                 LNIVPTSTGA
Sbjct: 240 TTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA 299

Query: 61  AKAVSLVLPQLKGKLNGIAL 2
           AKAVSLVLPQLKGKLNGIAL
Sbjct: 300 AKAVSLVLPQLKGKLNGIAL 319


>ref|NP_001237135.1| glyceraldehyde-3-phosphate dehydrogenase B subunit [Glycine max]
           gi|77540212|gb|ABA86964.1| glyceraldehyde-3-phosphate
           dehydrogenase B subunit [Glycine max]
          Length = 451

 Score =  465 bits (1196), Expect = e-128
 Identities = 239/319 (74%), Positives = 263/319 (82%), Gaps = 22/319 (6%)
 Frame = -1

Query: 892 MASNAALASSRIPTTTRLPSKSSHSYPTQCFSKRLNVAEFSGLRSSVSLTYSRSAGEGSF 713
           MA++AALAS+RIP+ TR PSK+SHS+PTQC  KRL V EFSGLRS+  +TY+ SA E SF
Sbjct: 1   MATHAALASTRIPSNTRFPSKASHSFPTQCALKRLEVTEFSGLRSTSCVTYANSARESSF 60

Query: 712 FDVVAAQLTPKTAGTLPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVNDS 533
           FD+VA+QLTPKT G+ PV+GETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVNDS
Sbjct: 61  FDLVASQLTPKTNGSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVNDS 120

Query: 532 GGVKNASHLLKYDSMLGTFKADVQVVDNETISVDGKPIKVVSNRDPLQLPWAELGIDIVI 353
           GGVKNASHLLKYDSMLGTFKADV+++DNETI+VDGKPIKVVS+RDPL+LPWAELGIDIVI
Sbjct: 121 GGVKNASHLLKYDSMLGTFKADVKILDNETITVDGKPIKVVSSRDPLKLPWAELGIDIVI 180

Query: 352 EGTGVFVDGPGAGKHIQAGAKKV----------------------XXXXVANIVSNASCT 239
           EGTGVFVDGPGAGKHIQAGAKKV                          ++NI+SNASCT
Sbjct: 181 EGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEGDYTHQISNIISNASCT 240

Query: 238 TNCLAPFVKVIDEEFGIVKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTGAA 59
           TNCLAPFVK++DEEFGIVKGTMTTTHSYTGDQ                 LNIVPTSTGAA
Sbjct: 241 TNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAA 300

Query: 58  KAVSLVLPQLKGKLNGIAL 2
           KAVSLVLPQLKGKLNGIAL
Sbjct: 301 KAVSLVLPQLKGKLNGIAL 319


>ref|XP_004145550.1| PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B,
           chloroplastic-like [Cucumis sativus]
           gi|449485095|ref|XP_004157068.1| PREDICTED:
           glyceraldehyde-3-phosphate dehydrogenase B,
           chloroplastic-like [Cucumis sativus]
          Length = 451

 Score =  464 bits (1193), Expect = e-128
 Identities = 244/319 (76%), Positives = 264/319 (82%), Gaps = 22/319 (6%)
 Frame = -1

Query: 892 MASNAALASSRIPTTTRLPSKSSHSYPTQCFSKRLNVAEFSGLRSSVSLTYSRSAGEGSF 713
           MA++AALAS+RIPT TRLPSK+S+S+PT+C SKRLNVAEF+GLRS+ SL+ S +  EGSF
Sbjct: 1   MATHAALASTRIPTNTRLPSKTSYSFPTRCSSKRLNVAEFNGLRSA-SLSSSNNGREGSF 59

Query: 712 FDVVAAQLTPKTAGTLPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVNDS 533
           FD VAAQLTPK   + PV+GETVAKLKVAINGFGRIGRNFLRCWHGRKDSPL+VVVVNDS
Sbjct: 60  FDAVAAQLTPKAVASTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 119

Query: 532 GGVKNASHLLKYDSMLGTFKADVQVVDNETISVDGKPIKVVSNRDPLQLPWAELGIDIVI 353
           GGVKNASHLLKYDSMLGTFKA+V++VDNETISVDGKPIKVVS+RDPL+LPWAELGIDIVI
Sbjct: 120 GGVKNASHLLKYDSMLGTFKAEVKIVDNETISVDGKPIKVVSSRDPLKLPWAELGIDIVI 179

Query: 352 EGTGVFVDGPGAGKHIQAGAKKV----------------------XXXXVANIVSNASCT 239
           EGTGVFVDGPGAGKHIQAGAKKV                          VANIVSNASCT
Sbjct: 180 EGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYYHDVANIVSNASCT 239

Query: 238 TNCLAPFVKVIDEEFGIVKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTGAA 59
           TNCLAPFVK+IDEEFGIVKGTMTTTHSYTGDQ                 LNIVPTSTGAA
Sbjct: 240 TNCLAPFVKIIDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAA 299

Query: 58  KAVSLVLPQLKGKLNGIAL 2
           KAVSLVLPQLKGKLNGIAL
Sbjct: 300 KAVSLVLPQLKGKLNGIAL 318


>emb|CAN69459.1| hypothetical protein VITISV_021576 [Vitis vinifera]
          Length = 453

 Score =  462 bits (1190), Expect = e-128
 Identities = 243/320 (75%), Positives = 264/320 (82%), Gaps = 23/320 (7%)
 Frame = -1

Query: 892 MASNAALASSRIPTT-TRLPSKSSHSYPTQCFSKRLNVAEFSGLRSSVSLTYSRSAGEGS 716
           MAS+AALASSRIPTT TRLPSK+SHS+PTQ F+KRL VAEFSGLRS   +T++++A E S
Sbjct: 1   MASHAALASSRIPTTNTRLPSKASHSFPTQFFAKRLEVAEFSGLRSGGCVTFAKNAREPS 60

Query: 715 FFDVVAAQLTPKTAGTLPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVND 536
           FFDVVA+QLTPK  G  PV+GETVAKLKVAINGFGRIGRNFLRCWHGRKDSPL+V+VVND
Sbjct: 61  FFDVVASQLTPKAGGPAPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIVVND 120

Query: 535 SGGVKNASHLLKYDSMLGTFKADVQVVDNETISVDGKPIKVVSNRDPLQLPWAELGIDIV 356
           SGGVKNASHLLKYDSMLGTFKA+V++VDNETISVDGKPIKVVS+RDPL+LPWAELGIDIV
Sbjct: 121 SGGVKNASHLLKYDSMLGTFKAEVKIVDNETISVDGKPIKVVSSRDPLKLPWAELGIDIV 180

Query: 355 IEGTGVFVDGPGAGKHIQAGAKKV----------------------XXXXVANIVSNASC 242
           IEGTGVFVDGPGAGKHIQAGAKKV                          V+NIVSNASC
Sbjct: 181 IEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEGDYSHEVSNIVSNASC 240

Query: 241 TTNCLAPFVKVIDEEFGIVKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTGA 62
           TTNCLAPFVK++DEE GIVKGTMTTTHSYTGDQ                 LNIVPTSTGA
Sbjct: 241 TTNCLAPFVKILDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA 300

Query: 61  AKAVSLVLPQLKGKLNGIAL 2
           AKAVSLVLPQLKGKLNGIAL
Sbjct: 301 AKAVSLVLPQLKGKLNGIAL 320


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