BLASTX nr result

ID: Bupleurum21_contig00003281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003281
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    57   1e-06
ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61400-like [Glycine max]
          Length = 498

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/63 (44%), Positives = 42/63 (66%)
 Frame = -3

Query: 362 DVLSYYTITKGYLQVKDMLSVMVLQADMLKVGIIPDVLICSILTNMYQEVGDLTSASRCS 183
           D+L Y T+ + + Q K M+ VM+L ADM+K+G+I +  I  +L+  Y+E G L SA  CS
Sbjct: 424 DMLVYVTMLQAHFQSKHMIDVMMLHADMVKMGVIQNTFIYRVLSRGYRENGYLKSALMCS 483

Query: 182 EHL 174
           E+L
Sbjct: 484 EYL 486


>ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/69 (42%), Positives = 42/69 (60%)
 Frame = -3

Query: 362 DVLSYYTITKGYLQVKDMLSVMVLQADMLKVGIIPDVLICSILTNMYQEVGDLTSASRCS 183
           DV +   I +G+ +   +  VM+LQAD+LK+GIIP+  +  +L   Y+E G L SA RCS
Sbjct: 590 DVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCS 649

Query: 182 EHLQVSNVG 156
           E L    +G
Sbjct: 650 EDLSGIGIG 658


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